RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	FAM198A	Q9UFP1	575 aa		13.42	□□□□□ -0.26
NPIPB4-222	ENST00000614197	RCAN3	Q9UKA8	241 aa		13.42	□□□□□ -0.26
NPIPB4-222	ENST00000614197	NOP58	Q9Y2X3	529 aa	Known RBP	13.42	□□□□□ -0.26
NPIPB4-222	ENST00000614197	GPR75-ASB3	A0A0A6YYF3	556 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	INPP5B	P32019	993 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	MCAM	P43121	646 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	CEP85	Q6P2H3	762 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	TBC1D9	Q6ZT07	1266 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	BRI3BP	Q8WY22	251 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	MS4A4A	Q96JQ5	239 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	DBNDD2	Q9BQY9	259 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	SNRK	Q9NRH2	765 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	HPS5	Q9UPZ3	1129 aa		13.41	□□□□□ -0.26
NPIPB4-222	ENST00000614197	IRF6	O14896	467 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	PI16	Q6UXB8	463 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	TEX11	Q8IYF3	940 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	NSUN4	Q96CB9	384 aa	Known RBP	13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	PTPN18	Q99952	460 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	TRIM34	Q9BYJ4	488 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	R3HDML	Q9H3Y0	253 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	EFCC1	Q9HA90	598 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	ZNF112	Q9UJU3	913 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	MYH13	Q9UKX3	1938 aa		13.4	□□□□□ -0.26
NPIPB4-222	ENST00000614197	NOL9	Q5SY16	702 aa	Known RBP	13.39	□□□□□ -0.27
NPIPB4-222	ENST00000614197	AACS	Q86V21	672 aa		13.39	□□□□□ -0.27
NPIPB4-222	ENST00000614197	SCYL3	Q8IZE3	742 aa		13.39	□□□□□ -0.27
NPIPB4-222	ENST00000614197	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.39	□□□□□ -0.27
NPIPB4-222	ENST00000614197	COG6	Q9Y2V7	657 aa		13.39	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.39	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CXCL11	O14625	94 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CTNND1	O60716	968 aa	Known RBP	13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	RGS19	P49795	217 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	SOX10	P56693	466 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	OTOP1	Q7RTM1	612 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CERS3	Q8IU89	383 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	ZFPM1	Q8IX07	1006 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CLASRP	Q8N2M8	674 aa	Known RBP	13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	FAM43A	Q8N2R8	423 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CD99L2	Q8TCZ2	262 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	EXOC6B	Q9Y2D4	811 aa		13.38	□□□□□ -0.27
NPIPB4-222	ENST00000614197	BTBD19	C9JJ37	291 aa		13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	IDH1	O75874	414 aa	Known RBP	13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	IFIT2	P09913	472 aa	Known RBP	13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	MAP3K12	Q12852	859 aa		13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	FASTKD5	Q7L8L6	764 aa	Known RBP	13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	ANKRD23	Q86SG2	305 aa		13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	KIF1BP	Q96EK5	621 aa		13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	BCL11A	Q9H165	835 aa		13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	DHX36	Q9H2U1	1008 aa	Known RBP	13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	DBNL	Q9UJU6	430 aa	Known RBP	13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	KCNH4	Q9UQ05	1017 aa		13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	ZHX2	Q9Y6X8	837 aa		13.37	□□□□□ -0.27
NPIPB4-222	ENST00000614197	DDTL	A6NHG4	134 aa	Predicted RBP	13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	APBB1	O00213	710 aa		13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TLR2	O60603	784 aa		13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	ZAP70	P43403	619 aa		13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	RHBDL3	P58872	404 aa		13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TMED8	Q6PL24	325 aa	Predicted RBP	13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	RHPN1	Q8TCX5	695 aa		13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	EAF2	Q96CJ1	260 aa	Predicted RBP	13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PARK7	Q99497	189 aa	Known RBP	13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PDHX	O00330	501 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TBC1D12	O60347	775 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	RAB11FIP3	O75154	756 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	GNRH1	P01148	92 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CYP2E1	P05181	493 aa	Predicted RBP	13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	HLA-DOA	P06340	250 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PTPRA	P18433	802 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	CYP7A1	P22680	504 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	HOXD10	P28358	340 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TTF1	Q15361	905 aa	Predicted RBP	13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	SH3BP5L	Q7L8J4	393 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	NBPF11	Q86T75	865 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TBC1D2	Q9BYX2	928 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	IL1RAPL2	Q9NP60	686 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	DDX4	Q9NQI0	724 aa	Known RBP	13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PI4KB	Q9UBF8	816 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	HERC5	Q9UII4	1024 aa	Known RBP	13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PTPN22	Q9Y2R2	807 aa		13.35	□□□□□ -0.27
NPIPB4-222	ENST00000614197	RFX7	Q2KHR2	1363 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	ATRNL1	Q5VV63	1379 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PHF20L1	A8MW92	1017 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	USP5	P45974	858 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PPP4C	P60510	307 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	PDE3A	Q14432	1141 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	GADL1	Q6ZQY3	521 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TGFBRAP1	Q8WUH2	860 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	AS3MT	Q9HBK9	375 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	ZBTB40	Q9NUA8	1239 aa		13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TLR7	Q9NYK1	1049 aa	Known RBP	13.34	□□□□□ -0.27
NPIPB4-222	ENST00000614197	TRIM75P	A6NK02	468 aa		13.33	□□□□□ -0.28
NPIPB4-222	ENST00000614197	PRMT2	P55345	433 aa		13.33	□□□□□ -0.28
NPIPB4-222	ENST00000614197	MAP3K10	Q02779	954 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms