RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 ZSCAN16Q9H4T2 348 aaPredicted RBP25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 SNRKQ9NRH2 765 aa25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 FEZ2Q9UHY8 353 aaPredicted RBP25.39■■□□□ 1.65
POLR2J3-220ENST00000613744 CCP110O43303 1012 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 TTLL6Q8N841 843 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 ANO10Q9NW15 660 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 BECN2A8MW95 431 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 AACSQ86V21 672 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 SYT17Q9BSW7 474 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 ST7Q9NRC1 585 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 PIM2Q9P1W9 311 aa25.38■■□□□ 1.65
POLR2J3-220ENST00000613744 NRDCO43847 1150 aa25.37■■□□□ 1.65
POLR2J3-220ENST00000613744 PLA2G4AP47712 749 aa25.37■■□□□ 1.65
POLR2J3-220ENST00000613744 CREB3L3Q68CJ9 461 aa25.37■■□□□ 1.65
POLR2J3-220ENST00000613744 EFCC1Q9HA90 598 aa25.37■■□□□ 1.65
POLR2J3-220ENST00000613744 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.37■■□□□ 1.65
POLR2J3-220ENST00000613744 LRP5O75197 1615 aa25.37■■□□□ 1.65
POLR2J3-220ENST00000613744 ARID5BQ14865 1188 aa25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 CEP126Q9P2H0 1117 aa25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 C21orf2O43822 256 aa25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 IFIT2P09913 472 aaKnown RBP25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 FAM173BQ6P4H8 233 aa25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 TMCO3Q6UWJ1 677 aa25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 CCDC8Q9H0W5 538 aaPredicted RBP25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 TFIP11Q9UBB9 837 aaKnown RBP25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 DLEC1Q9Y238 1755 aa25.36■■□□□ 1.65
POLR2J3-220ENST00000613744 ERCC6LQ2NKX8 1250 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 C11orf57Q6ZUT1 292 aaPredicted RBP25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 MAP4K1Q92918 833 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 EAF2Q96CJ1 260 aaPredicted RBP25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 GPATCH3Q96I76 525 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 NAT10Q9H0A0 1025 aaKnown RBP25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 TRMT1Q9NXH9 659 aaKnown RBP25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 ANKIB1Q9P2G1 1089 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 FBXO3Q9UK99 471 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 RAD51AP2Q09MP3 1159 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 RESTQ13127 1097 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 GPS2Q13227 327 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 EVI5LQ96CN4 794 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 UBXN6Q9BZV1 441 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 ATP6V0A2Q9Y487 856 aa25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 RBM8AQ9Y5S9 174 aaKnown RBP25.35■■□□□ 1.65
POLR2J3-220ENST00000613744 MROH5Q6ZUA9 1318 aa25.34■■□□□ 1.65
POLR2J3-220ENST00000613744 PHLPP2Q6ZVD8 1323 aa25.34■■□□□ 1.65
POLR2J3-220ENST00000613744 GPSM2P81274 684 aa25.34■■□□□ 1.65
POLR2J3-220ENST00000613744 DHX40Q8IX18 779 aaKnown RBP25.34■■□□□ 1.65
POLR2J3-220ENST00000613744 BCS1LQ9Y276 419 aa25.34■■□□□ 1.65
POLR2J3-220ENST00000613744 TIMM10P62072 90 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 BLOC1S2Q6QNY1 142 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 CEP57L1Q8IYX8 460 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 VGLL2Q8N8G2 317 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 PPP1R13BQ96KQ4 1090 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 TLR7Q9NYK1 1049 aaKnown RBP25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 PDE8BO95263 885 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 DALRD3Q5D0E6 543 aaKnown RBP25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 ATL3Q6DD88 541 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 SP8Q8IXZ3 490 aa25.33■■□□□ 1.65
POLR2J3-220ENST00000613744 RPS6KB1P23443 525 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 TNNI3KQ59H18 835 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 E4F1Q66K89 784 aaPredicted RBP25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 GTF3C6Q969F1 213 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 ECHDC1Q9NTX5 307 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 FPGT-TNNI3KV9GXZ4 949 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 TSGA10IPQ3SY00 556 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 ARHGAP29Q52LW3 1261 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 NEUROD6Q96NK8 337 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 GPR101Q96P66 508 aaPredicted RBP25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 TRIM34Q9BYJ4 488 aa25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 ORC3Q9UBD5 711 aaPredicted RBP25.32■■□□□ 1.64
POLR2J3-220ENST00000613744 MYH15Q9Y2K3 1946 aa25.31■■□□□ 1.64
POLR2J3-220ENST00000613744 C7orf43Q8WVR3 580 aa25.31■■□□□ 1.64
POLR2J3-220ENST00000613744 HMG20BQ9P0W2 317 aa25.31■■□□□ 1.64
POLR2J3-220ENST00000613744 SLC27A2O14975 620 aa25.3■■□□□ 1.64
POLR2J3-220ENST00000613744 UBXN4Q92575 508 aa25.3■■□□□ 1.64
POLR2J3-220ENST00000613744 BPIFA3Q9BQP9 254 aa25.3■■□□□ 1.64
POLR2J3-220ENST00000613744 TMX4Q9H1E5 349 aaPredicted RBP25.3■■□□□ 1.64
POLR2J3-220ENST00000613744 CWC15Q9P013 229 aaKnown RBP25.3■■□□□ 1.64
POLR2J3-220ENST00000613744 BRCA1P38398 1863 aaKnown RBP25.29■■□□□ 1.64
POLR2J3-220ENST00000613744 RCOR1Q9UKL0 485 aa25.29■■□□□ 1.64
POLR2J3-220ENST00000613744 A0A1B0GUL7 405 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 CCDC158Q5M9N0 1113 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 CCDC73Q6ZRK6 1079 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 TMC4Q7Z404 712 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 ANKRD2Q9GZV1 360 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 KLRK1P26718 216 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 CTR9Q6PD62 1173 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 SYT10Q6XYQ8 523 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 PSD3Q9NYI0 1048 aa25.28■■□□□ 1.64
POLR2J3-220ENST00000613744 EFCAB8A8MWE9 144 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 ADORA1P30542 326 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 ETF1P62495 437 aaKnown RBP25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 TOB2Q14106 344 aaPredicted RBP25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 PUM3Q15397 648 aaKnown RBP25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 RASSF4Q9H2L5 321 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 POLLQ9UGP5 575 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 DBNLQ9UJU6 430 aaKnown RBP25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 XDHP47989 1333 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 A0A1B0GUL6 1792 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 UFL1O94874 794 aa25.27■■□□□ 1.64
POLR2J3-220ENST00000613744 DPP8Q6V1X1 898 aaPredicted RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms