RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SLC10A5Q5PT55 438 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 CEP135Q66GS9 1140 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 FBXO38Q6PIJ6 1188 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 CACTINQ8WUQ7 758 aaKnown RBP19.1■□□□□ 0.65
CNOT3-208ENST00000613073 ANGEL1Q9UNK9 670 aaKnown RBP19.1■□□□□ 0.65
CNOT3-208ENST00000613073 AFF2P51816 1311 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 UBE4AQ14139 1066 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 ARID5BQ14865 1188 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 ANO6Q4KMQ2 910 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 CAVIN4Q5BKX8 364 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 RRP12Q5JTH9 1297 aaKnown RBP19.1■□□□□ 0.65
CNOT3-208ENST00000613073 TPTE2Q6XPS3 522 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 CERS3Q8IU89 383 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 PGBD1Q96JS3 809 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 TOMM22Q9NS69 142 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 MRVI1Q9Y6F6 885 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 ZNF831Q5JPB2 1677 aa19.1■□□□□ 0.65
CNOT3-208ENST00000613073 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
CNOT3-208ENST00000613073 GNL3LQ9NVN8 582 aaKnown RBP19.1■□□□□ 0.65
CNOT3-208ENST00000613073 RFC4P35249 363 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 ADD1P35611 737 aaKnown RBP19.09■□□□□ 0.65
CNOT3-208ENST00000613073 SDR42E1Q8WUS8 393 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 TRIM34Q9BYJ4 488 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 CBX8Q9HC52 389 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 TRMT1Q9NXH9 659 aaKnown RBP19.09■□□□□ 0.65
CNOT3-208ENST00000613073 DACT1Q9NYF0 836 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 TFCP2L1Q9NZI6 479 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 ORC3Q9UBD5 711 aaPredicted RBP19.09■□□□□ 0.65
CNOT3-208ENST00000613073 ZNF804BA4D1E1 1349 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 HSPA1LP34931 641 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 SYCP1Q15431 976 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 CCDC144BQ3MJ40 725 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 FAM196AQ6ZSG2 479 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 ZNF397Q8NF99 534 aaPredicted RBP19.09■□□□□ 0.65
CNOT3-208ENST00000613073 BICD2Q8TD16 824 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 MYL10Q9BUA6 226 aa19.09■□□□□ 0.65
CNOT3-208ENST00000613073 DOCK2Q92608 1830 aa19.08■□□□□ 0.65
CNOT3-208ENST00000613073 SH2B2O14492 632 aaPredicted RBP19.08■□□□□ 0.65
CNOT3-208ENST00000613073 DHX16O60231 1041 aaKnown RBP19.08■□□□□ 0.65
CNOT3-208ENST00000613073 ALX1Q15699 326 aa19.08■□□□□ 0.65
CNOT3-208ENST00000613073 MAP3K11Q16584 847 aa19.08■□□□□ 0.65
CNOT3-208ENST00000613073 MICU3Q86XE3 530 aa19.08■□□□□ 0.65
CNOT3-208ENST00000613073 ZSWIM5Q9P217 1185 aa19.08■□□□□ 0.65
CNOT3-208ENST00000613073 CFAP45Q9UL16 551 aa19.08■□□□□ 0.65
CNOT3-208ENST00000613073 PAXBP1Q9Y5B6 917 aa19.08■□□□□ 0.65
CNOT3-208ENST00000613073 RBM6P78332 1123 aaKnown RBP19.08■□□□□ 0.64
CNOT3-208ENST00000613073 NFXL1Q6ZNB6 911 aa19.08■□□□□ 0.64
CNOT3-208ENST00000613073 SEPT12Q8IYM1 358 aa19.08■□□□□ 0.64
CNOT3-208ENST00000613073 NUP62CLQ9H1M0 184 aa19.08■□□□□ 0.64
CNOT3-208ENST00000613073 COL1A1P02452 1464 aaPredicted RBP19.08■□□□□ 0.64
CNOT3-208ENST00000613073 SCN7AQ01118 1682 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 CASZ1Q86V15 1759 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 ZKSCAN3Q9BRR0 538 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 THSD7AQ9UPZ6 1657 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 TMEM67Q5HYA8 995 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 TRAPPC3LQ5T215 181 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 C8orf76Q96K31 380 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 USP28Q96RU2 1077 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 NACAP1Q9BZK3 213 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 CLIP2Q9UDT6 1046 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 JAG2Q9Y219 1238 aa19.07■□□□□ 0.64
CNOT3-208ENST00000613073 WDR19Q8NEZ3 1342 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 METAP2P50579 478 aaKnown RBP eCLIP19.06■□□□□ 0.64
CNOT3-208ENST00000613073 ZNF75DP51815 510 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 ILDR1Q86SU0 546 aaPredicted RBP19.06■□□□□ 0.64
CNOT3-208ENST00000613073 IGDCC4Q8TDY8 1250 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 CHMP4CQ96CF2 233 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 LRRC4BQ9NT99 713 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 SMIM22K7EJ46 135 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 NR1I2O75469 434 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 AKNAD1Q5T1N1 836 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 APOA5Q6Q788 366 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 MFSD6Q6ZSS7 791 aa19.06■□□□□ 0.64
CNOT3-208ENST00000613073 MINDY4BA8MYZ0 360 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 IFIT3O14879 490 aaKnown RBP19.05■□□□□ 0.64
CNOT3-208ENST00000613073 POLR3DP05423 398 aaPredicted RBP19.05■□□□□ 0.64
CNOT3-208ENST00000613073 AIFM3Q96NN9 605 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 NHSQ6T4R5 1651 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 PNPLA7Q6ZV29 1317 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 GNAT2P19087 354 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 CDC27P30260 824 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 DYNLL1P63167 89 aaKnown RBP19.05■□□□□ 0.64
CNOT3-208ENST00000613073 PHKBQ93100 1093 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 LY9Q9HBG7 655 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 CALCOCO1Q9P1Z2 691 aa19.05■□□□□ 0.64
CNOT3-208ENST00000613073 TNMDQ9H2S6 317 aa19.04■□□□□ 0.64
CNOT3-208ENST00000613073 TMEM87BQ96K49 555 aa19.04■□□□□ 0.64
CNOT3-208ENST00000613073 DNAJC25Q9H1X3 360 aa19.04■□□□□ 0.64
CNOT3-208ENST00000613073 TXNRD3Q86VQ6 643 aa19.04■□□□□ 0.64
CNOT3-208ENST00000613073 ZBTB9Q96C00 473 aa19.04■□□□□ 0.64
CNOT3-208ENST00000613073 ZMYM6O95789 1325 aa19.03■□□□□ 0.64
CNOT3-208ENST00000613073 ZBTB43O43298 467 aa19.03■□□□□ 0.64
CNOT3-208ENST00000613073 TM4SF1P30408 202 aa19.03■□□□□ 0.64
CNOT3-208ENST00000613073 NFIXQ14938 502 aa19.03■□□□□ 0.64
CNOT3-208ENST00000613073 FBXO18Q8NFZ0 1043 aa19.03■□□□□ 0.64
CNOT3-208ENST00000613073 ZNF384Q8TF68 577 aa19.03■□□□□ 0.64
CNOT3-208ENST00000613073 RGL2O15211 777 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms