RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CXCL11O14625 94 aa29.27■■■□□ 2.28
MMP28-203ENST00000612672 SCYL3Q8IZE3 742 aa29.27■■■□□ 2.28
MMP28-203ENST00000612672 DDX4Q9NQI0 724 aaKnown RBP29.27■■■□□ 2.28
MMP28-203ENST00000612672 GAKO14976 1311 aa29.26■■■□□ 2.27
MMP28-203ENST00000612672 PTPRAP18433 802 aa29.26■■■□□ 2.27
MMP28-203ENST00000612672 FCGRTP55899 365 aa29.26■■■□□ 2.27
MMP28-203ENST00000612672 CCDC84Q86UT8 332 aaPredicted RBP29.26■■■□□ 2.27
MMP28-203ENST00000612672 U2AF1L4Q8WU68 220 aaKnown RBP29.26■■■□□ 2.27
MMP28-203ENST00000612672 PA2G4Q9UQ80 394 aaKnown RBP29.26■■■□□ 2.27
MMP28-203ENST00000612672 ZHX2Q9Y6X8 837 aa29.26■■■□□ 2.27
MMP28-203ENST00000612672 DDTLA6NHG4 134 aaPredicted RBP29.25■■■□□ 2.27
MMP28-203ENST00000612672 ELNP15502 786 aa29.25■■■□□ 2.27
MMP28-203ENST00000612672 NKX2-3Q8TAU0 364 aa29.25■■■□□ 2.27
MMP28-203ENST00000612672 IDI2Q9BXS1 227 aa29.25■■■□□ 2.27
MMP28-203ENST00000612672 BIN2Q9UBW5 565 aaPredicted RBP29.25■■■□□ 2.27
MMP28-203ENST00000612672 AFG3L2Q9Y4W6 797 aa29.25■■■□□ 2.27
MMP28-203ENST00000612672 ATAD5Q96QE3 1844 aa29.24■■■□□ 2.27
MMP28-203ENST00000612672 LOC285556D6RIA3 1793 aa29.24■■■□□ 2.27
MMP28-203ENST00000612672 CIAO1O76071 339 aa29.23■■■□□ 2.27
MMP28-203ENST00000612672 MAP3K10Q02779 954 aa29.23■■■□□ 2.27
MMP28-203ENST00000612672 GADL1Q6ZQY3 521 aa29.23■■■□□ 2.27
MMP28-203ENST00000612672 SLAIN1Q8ND83 568 aa29.23■■■□□ 2.27
MMP28-203ENST00000612672 FARP2O94887 1054 aaPredicted RBP29.22■■■□□ 2.27
MMP28-203ENST00000612672 FLT3LGP49771 235 aa29.22■■■□□ 2.27
MMP28-203ENST00000612672 UBXN2AP68543 259 aa29.22■■■□□ 2.27
MMP28-203ENST00000612672 DENND2AQ9ULE3 1009 aa29.22■■■□□ 2.27
MMP28-203ENST00000612672 ZBTB7BO15156 539 aaPredicted RBP29.21■■■□□ 2.27
MMP28-203ENST00000612672 ADCY3O60266 1144 aa29.21■■■□□ 2.27
MMP28-203ENST00000612672 ENTPD3O75355 529 aa29.21■■■□□ 2.27
MMP28-203ENST00000612672 CEP126Q9P2H0 1117 aa29.21■■■□□ 2.27
MMP28-203ENST00000612672 INHAP05111 366 aa29.2■■■□□ 2.26
MMP28-203ENST00000612672 RASGRF1Q13972 1273 aa29.2■■■□□ 2.26
MMP28-203ENST00000612672 CCDC102BQ68D86 513 aa29.2■■■□□ 2.26
MMP28-203ENST00000612672 ZNF384Q8TF68 577 aa29.2■■■□□ 2.26
MMP28-203ENST00000612672 HTATIP2Q9BUP3 242 aa29.2■■■□□ 2.26
MMP28-203ENST00000612672 PICK1Q9NRD5 415 aa29.2■■■□□ 2.26
MMP28-203ENST00000612672 GNL3LQ9NVN8 582 aaKnown RBP29.2■■■□□ 2.26
MMP28-203ENST00000612672 A0A0C4DFX4 3053 aa29.2■■■□□ 2.26
MMP28-203ENST00000612672 SGPL1O95470 568 aa29.19■■■□□ 2.26
MMP28-203ENST00000612672 FASTKD5Q7L8L6 764 aaKnown RBP29.19■■■□□ 2.26
MMP28-203ENST00000612672 FBXO3Q9UK99 471 aa29.19■■■□□ 2.26
MMP28-203ENST00000612672 LRRFIP2Q9Y608 721 aaKnown RBP29.19■■■□□ 2.26
MMP28-203ENST00000612672 PLXNB2O15031 1838 aa29.18■■■□□ 2.26
MMP28-203ENST00000612672 TRIM75PA6NK02 468 aa29.18■■■□□ 2.26
MMP28-203ENST00000612672 E9PSI1 815 aa29.18■■■□□ 2.26
MMP28-203ENST00000612672 SEMA3EO15041 775 aa29.18■■■□□ 2.26
MMP28-203ENST00000612672 UBTFL1P0CB47 393 aaPredicted RBP29.18■■■□□ 2.26
MMP28-203ENST00000612672 SLFN5Q08AF3 891 aa29.18■■■□□ 2.26
MMP28-203ENST00000612672 TREML2Q5T2D2 321 aa29.18■■■□□ 2.26
MMP28-203ENST00000612672 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.18■■■□□ 2.26
MMP28-203ENST00000612672 SIPA1L1O43166 1804 aa29.17■■■□□ 2.26
MMP28-203ENST00000612672 FAM196BA6NMK8 535 aa29.17■■■□□ 2.26
MMP28-203ENST00000612672 PICALMQ13492 652 aa29.17■■■□□ 2.26
MMP28-203ENST00000612672 ZSCAN29Q8IWY8 852 aaPredicted RBP29.17■■■□□ 2.26
MMP28-203ENST00000612672 CDCA7LQ96GN5 454 aa29.17■■■□□ 2.26
MMP28-203ENST00000612672 SLC45A1Q9Y2W3 748 aa29.17■■■□□ 2.26
MMP28-203ENST00000612672 SOX1O00570 391 aaPredicted RBP29.16■■■□□ 2.26
MMP28-203ENST00000612672 ZBTB22O15209 634 aa29.16■■■□□ 2.26
MMP28-203ENST00000612672 IL15P40933 162 aaPredicted RBP29.16■■■□□ 2.26
MMP28-203ENST00000612672 BTDP43251 543 aa29.16■■■□□ 2.26
MMP28-203ENST00000612672 SMC4Q9NTJ3 1288 aa29.16■■■□□ 2.26
MMP28-203ENST00000612672 TNPO2O14787 897 aaKnown RBP29.15■■■□□ 2.26
MMP28-203ENST00000612672 RHBDL3P58872 404 aa29.15■■■□□ 2.26
MMP28-203ENST00000612672 TIMM10P62072 90 aa29.15■■■□□ 2.26
MMP28-203ENST00000612672 ALDH1L2Q3SY69 923 aa29.15■■■□□ 2.26
MMP28-203ENST00000612672 DEFB118Q96PH6 123 aa29.15■■■□□ 2.26
MMP28-203ENST00000612672 PAK6Q9NQU5 681 aaPredicted RBP29.15■■■□□ 2.26
MMP28-203ENST00000612672 ABCF2Q9UG63 623 aa29.15■■■□□ 2.26
MMP28-203ENST00000612672 MROH7-TTC4A0A0A0MT08 1334 aa29.15■■■□□ 2.26
MMP28-203ENST00000612672 CTNND1O60716 968 aaKnown RBP29.14■■■□□ 2.26
MMP28-203ENST00000612672 IRF5Q13568 498 aa29.14■■■□□ 2.26
MMP28-203ENST00000612672 DZIP1Q86YF9 867 aaKnown RBP29.14■■■□□ 2.26
MMP28-203ENST00000612672 ANKRD13CQ8N6S4 541 aa29.14■■■□□ 2.26
MMP28-203ENST00000612672 PXYLP1Q8TE99 480 aa29.14■■■□□ 2.26
MMP28-203ENST00000612672 SMCR8Q8TEV9 937 aaPredicted RBP29.13■■■□□ 2.25
MMP28-203ENST00000612672 DIS3LQ8TF46 1054 aaKnown RBP29.13■■■□□ 2.25
MMP28-203ENST00000612672 FAM163AQ96GL9 167 aaPredicted RBP29.13■■■□□ 2.25
MMP28-203ENST00000612672 MEIS3Q99687 375 aa29.13■■■□□ 2.25
MMP28-203ENST00000612672 COPRSQ9NQ92 184 aa29.13■■■□□ 2.25
MMP28-203ENST00000612672 AGTPBP1Q9UPW5 1226 aa29.13■■■□□ 2.25
MMP28-203ENST00000612672 RRP1BQ14684 758 aaKnown RBP29.12■■■□□ 2.25
MMP28-203ENST00000612672 NR2E3Q9Y5X4 410 aa29.12■■■□□ 2.25
MMP28-203ENST00000612672 PDS5AQ29RF7 1337 aaKnown RBP29.12■■■□□ 2.25
MMP28-203ENST00000612672 MECOMQ03112 1051 aa29.11■■■□□ 2.25
MMP28-203ENST00000612672 ZGPATQ8N5A5 531 aaKnown RBP29.11■■■□□ 2.25
MMP28-203ENST00000612672 CRISPLD2Q9H0B8 497 aa29.11■■■□□ 2.25
MMP28-203ENST00000612672 TAOK2Q9UL54 1235 aa29.11■■■□□ 2.25
MMP28-203ENST00000612672 NOB1Q9ULX3 412 aaKnown RBP29.11■■■□□ 2.25
MMP28-203ENST00000612672 CDK5RAP2Q96SN8 1893 aa29.1■■■□□ 2.25
MMP28-203ENST00000612672 ZNF316A6NFI3 1004 aaPredicted RBP29.1■■■□□ 2.25
MMP28-203ENST00000612672 PI16Q6UXB8 463 aa29.1■■■□□ 2.25
MMP28-203ENST00000612672 LRCH3Q96II8 777 aa29.1■■■□□ 2.25
MMP28-203ENST00000612672 DDX60LQ5H9U9 1706 aaKnown RBP29.1■■■□□ 2.25
MMP28-203ENST00000612672 GPR75-ASB3A0A0A6YYF3 556 aa29.09■■■□□ 2.25
MMP28-203ENST00000612672 A0A1B0GUL7 405 aa29.09■■■□□ 2.25
MMP28-203ENST00000612672 TFRCP02786 760 aaKnown RBP29.09■■■□□ 2.25
MMP28-203ENST00000612672 XAGE2Q96GT9 111 aa29.09■■■□□ 2.25
MMP28-203ENST00000612672 PAWRQ96IZ0 340 aaKnown RBP29.09■■■□□ 2.25
MMP28-203ENST00000612672 TFCP2Q12800 502 aa29.08■■■□□ 2.25
MMP28-203ENST00000612672 TRIM32Q13049 653 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms