RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 ZNF280AP59817 542 aaPredicted RBP15.31■□□□□ 0.04
PRKN-210ENST00000612540 KIF4BQ2VIQ3 1234 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 CDC42EP5Q6NZY7 148 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 MAPKAPK5Q8IW41 473 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 TGFBRAP1Q8WUH2 860 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 NAPBQ9H115 298 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 TDRD3Q9H7E2 651 aaKnown RBP15.31■□□□□ 0.04
PRKN-210ENST00000612540 LAMB1P07942 1786 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 LAMA4Q16363 1823 aa15.31■□□□□ 0.04
PRKN-210ENST00000612540 POLR2AP24928 1970 aaKnown RBP15.31■□□□□ 0.04
PRKN-210ENST00000612540 CLRN2A0PK11 232 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 RASSF10A6NK89 507 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 GSG1L2A8MUP6 293 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 PATL2C9JE40 543 aaKnown RBP15.3■□□□□ 0.04
PRKN-210ENST00000612540 MYO1BO43795 1136 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 CACNB3P54284 484 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 RHBDL3P58872 404 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 PICALMQ13492 652 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 SAMD7Q7Z3H4 446 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 PRMT6Q96LA8 375 aaPredicted RBP15.3■□□□□ 0.04
PRKN-210ENST00000612540 RPAP1Q9BWH6 1393 aaPredicted RBP15.3■□□□□ 0.04
PRKN-210ENST00000612540 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 EPB41L4AQ9HCS5 686 aaPredicted RBP15.3■□□□□ 0.04
PRKN-210ENST00000612540 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
PRKN-210ENST00000612540 FOXP2O15409 715 aa15.29■□□□□ 0.04
PRKN-210ENST00000612540 USP50Q70EL3 339 aaPredicted RBP15.29■□□□□ 0.04
PRKN-210ENST00000612540 IFNL3Q8IZI9 196 aa15.29■□□□□ 0.04
PRKN-210ENST00000612540 MTMR14Q8NCE2 650 aa15.29■□□□□ 0.04
PRKN-210ENST00000612540 MAP4K1Q92918 833 aa15.29■□□□□ 0.04
PRKN-210ENST00000612540 C22orf23Q9BZE7 217 aa15.29■□□□□ 0.04
PRKN-210ENST00000612540 ATP8A2Q9NTI2 1148 aa15.29■□□□□ 0.04
PRKN-210ENST00000612540 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
PRKN-210ENST00000612540 FLT1P17948 1338 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 FOXN1O15353 648 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 EGFRP00533 1210 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 HAND2P61296 217 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 NBPF9Q3BBW0 867 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 RNF20Q5VTR2 975 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 AMOTL1Q8IY63 956 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 TRPM4Q8TD43 1214 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 DCP1AQ9NPI6 582 aaPredicted RBP15.28■□□□□ 0.04
PRKN-210ENST00000612540 MCM9Q9NXL9 1143 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 ZNF70Q9UC06 446 aaPredicted RBP15.28■□□□□ 0.04
PRKN-210ENST00000612540 THSD7BQ9C0I4 1608 aa15.28■□□□□ 0.04
PRKN-210ENST00000612540 DDX60LQ5H9U9 1706 aaKnown RBP15.27■□□□□ 0.04
PRKN-210ENST00000612540 MINDY4BA8MYZ0 360 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 WNT10BO00744 389 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 EPB41L2O43491 1005 aaKnown RBP15.27■□□□□ 0.04
PRKN-210ENST00000612540 WDHD1O75717 1129 aaPredicted RBP15.27■□□□□ 0.04
PRKN-210ENST00000612540 FGAP02671 866 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 ALX1Q15699 326 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 IMMTQ16891 758 aaKnown RBP15.27■□□□□ 0.04
PRKN-210ENST00000612540 DEFB115Q30KQ5 88 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 CREB3L3Q68CJ9 461 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 GIMAP6Q6P9H5 292 aa15.27■□□□□ 0.04
PRKN-210ENST00000612540 ZMYM6O95789 1325 aa15.26■□□□□ 0.03
PRKN-210ENST00000612540 SLC27A2O14975 620 aa15.26■□□□□ 0.03
PRKN-210ENST00000612540 POLR3DP05423 398 aaPredicted RBP15.26■□□□□ 0.03
PRKN-210ENST00000612540 ZKSCAN1P17029 563 aaPredicted RBP15.26■□□□□ 0.03
PRKN-210ENST00000612540 FMR1Q06787 632 aaKnown RBP eCLIP15.26■□□□□ 0.03
PRKN-210ENST00000612540 TCP10Q12799 353 aa15.26■□□□□ 0.03
PRKN-210ENST00000612540 NFIAQ12857 509 aa15.26■□□□□ 0.03
PRKN-210ENST00000612540 ZBED3Q96IU2 234 aaPredicted RBP15.26■□□□□ 0.03
PRKN-210ENST00000612540 TBC1D32Q96NH3 1257 aa15.26■□□□□ 0.03
PRKN-210ENST00000612540 DDX4Q9NQI0 724 aaKnown RBP15.26■□□□□ 0.03
PRKN-210ENST00000612540 ADARB2Q9NS39 739 aaKnown RBP15.26■□□□□ 0.03
PRKN-210ENST00000612540 WBP1LQ9NX94 342 aa15.26■□□□□ 0.03
PRKN-210ENST00000612540 ARPP21Q9UBL0 812 aaPredicted RBP15.26■□□□□ 0.03
PRKN-210ENST00000612540 CYP2D7A0A087X1C5 515 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 USP17L12C9JPN9 530 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 USP17L21D6R901 530 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 ZNF213O14771 459 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 CYP2D6P10635 497 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 HSPA4P34932 840 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 ZSCAN29Q8IWY8 852 aaPredicted RBP15.25■□□□□ 0.03
PRKN-210ENST00000612540 STK11IPQ8N1F8 1099 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 MYH8P13535 1937 aa15.25■□□□□ 0.03
PRKN-210ENST00000612540 ASTN2O75129 1339 aaPredicted RBP15.24■□□□□ 0.03
PRKN-210ENST00000612540 WDR33Q9C0J8 1336 aaKnown RBP15.24■□□□□ 0.03
PRKN-210ENST00000612540 NECTIN1Q15223 517 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 CST9Q5W186 159 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 CTR9Q6PD62 1173 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 IDI2Q9BXS1 227 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 OSBPL5Q9H0X9 879 aaPredicted RBP15.24■□□□□ 0.03
PRKN-210ENST00000612540 PRDM10Q9NQV6 1147 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 GGA3Q9NZ52 723 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 FAM198AQ9UFP1 575 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 PALD1Q9ULE6 856 aa15.24■□□□□ 0.03
PRKN-210ENST00000612540 ABT1Q9ULW3 272 aaKnown RBP15.24■□□□□ 0.03
PRKN-210ENST00000612540 TRAF5O00463 557 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 CYP21A2P08686 494 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 TNNI2P48788 182 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 CTCFP49711 727 aaPredicted RBP15.23■□□□□ 0.03
PRKN-210ENST00000612540 RBM25P49756 843 aaKnown RBP15.23■□□□□ 0.03
PRKN-210ENST00000612540 CTDSPL2Q05D32 466 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 PPARAQ07869 468 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms