RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 CHL1O00533 1208 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 HOXB7P09629 217 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 IGHMBP2P38935 993 aaKnown RBP9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 SMAD3P84022 425 aaKnown RBP9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 CHRNDQ07001 517 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 C9orf50Q5SZB4 431 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 PDCD7Q8N8D1 485 aaKnown RBP9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ADAMTS19Q8TE59 1207 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ATXN2LQ8WWM7 1075 aaKnown RBP9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 LBHD1Q9BQE6 289 aaPredicted RBP9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 C1QTNF1Q9BXJ1 281 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 PHAXQ9H814 394 aaKnown RBP9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ZNF112Q9UJU3 913 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 GJD2Q9UKL4 321 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 TAOK2Q9UL54 1235 aa9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 TTF2Q9UNY4 1162 aaKnown RBP9.27□□□□□ -0.93
PTCHD3P1-201ENST00000612350 CXCL11O14625 94 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 CRKP46108 304 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 KCNJ4P48050 445 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 CACNB3P54284 484 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MAP3K21Q5TCX8 1036 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MIGA2Q7L4E1 593 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 COA7Q96BR5 231 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 UHRF1Q96T88 793 aaPredicted RBP9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ZNF341Q9BYN7 854 aa9.26□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ZNF316A6NFI3 1004 aaPredicted RBP9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 TAF5LO75529 589 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 RIPK4P57078 832 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 GRIN2CQ14957 1233 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MFSD14BQ5SR56 506 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 NOL9Q5SY16 702 aaKnown RBP9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ZNF804AQ7Z570 1209 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 FAM83AQ86UY5 434 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ALYREFQ86V81 257 aaKnown RBP9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 LRFN3Q9BTN0 628 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 METTL22Q9BUU2 404 aaPredicted RBP9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 LTBP2Q14767 1821 aa9.25□□□□□ -0.93
PTCHD3P1-201ENST00000612350 SNPHO15079 494 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ITGA6P23229 1130 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 GRIK5Q16478 980 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 DCAF15Q66K64 600 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 TDRD7Q8NHU6 1098 aaKnown RBP9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 TRIB2Q92519 343 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 HOOK2Q96ED9 719 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MPHOSPH8Q99549 860 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 SLC45A1Q9Y2W3 748 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 HCN4Q9Y3Q4 1203 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
PTCHD3P1-201ENST00000612350 A0A1B0GUL6 1792 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MAST2Q6P0Q8 1798 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 A0A0G2JLL6 359 aaPredicted RBP9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 IGKV5-2P06315 115 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 FKBP1CQ5VVH2 108 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 FASTKD5Q7L8L6 764 aaKnown RBP9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 PRRT2Q7Z6L0 340 aaPredicted RBP9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ANKRD13CQ8N6S4 541 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MAPK8IP3Q9UPT6 1336 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MUC6Q6W4X9 2439 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 AK9Q5TCS8 1911 aa9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 RPAP1Q9BWH6 1393 aaPredicted RBP9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 TCF20Q9UGU0 1960 aaKnown RBP9.23□□□□□ -0.93
PTCHD3P1-201ENST00000612350 LAMA2P24043 3122 aaKnown RBP9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 H7C1W4 665 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 ST18O60284 1047 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 CSF1RP07333 972 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MRPS5P82675 430 aaKnown RBP9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 HDLBPQ00341 1268 aaKnown RBP9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 FAM110CQ1W6H9 321 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 DUSP27Q5VZP5 1158 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 NECAB3Q96P71 396 aaPredicted RBP9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 PLA2G12BQ9BX93 195 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 EPHX3Q9H6B9 360 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 THEGQ9P2T0 379 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 PTPRFP10586 1907 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 CDH23Q9H251 3354 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 MYO9BQ13459 2157 aa9.22□□□□□ -0.93
PTCHD3P1-201ENST00000612350 APOBEC3HQ6NTF7 200 aaKnown RBP9.21□□□□□ -0.94
PTCHD3P1-201ENST00000612350 SMCR8Q8TEV9 937 aaPredicted RBP9.21□□□□□ -0.94
PTCHD3P1-201ENST00000612350 MRIQ9BWK5 157 aa9.21□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PNNQ9H307 717 aaKnown RBP9.21□□□□□ -0.94
PTCHD3P1-201ENST00000612350 AFG3L2Q9Y4W6 797 aa9.21□□□□□ -0.94
PTCHD3P1-201ENST00000612350 BMP1P13497 986 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 TMPOP42166 694 aaKnown RBP9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 CACNB2Q08289 660 aaPredicted RBP9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PDE3AQ14432 1141 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 AKNAD1Q5T1N1 836 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 POTEEQ6S8J3 1075 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 GADL1Q6ZQY3 521 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PPM1EQ8WY54 764 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ZDHHC15Q96MV8 337 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 SENP6Q9GZR1 1112 aaPredicted RBP9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 MAP3K2Q9Y2U5 619 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 ZHX2Q9Y6X8 837 aa9.2□□□□□ -0.94
PTCHD3P1-201ENST00000612350 BDP1A6H8Y1 2624 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 PTPRAP18433 802 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 CYP2B6P20813 491 aa9.19□□□□□ -0.94
PTCHD3P1-201ENST00000612350 CCND3P30281 292 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms