RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ST5P78524 1137 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 MAP3K9P80192 1104 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 TRDNQ13061 729 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 MPHOSPH8Q99549 860 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 LAMB4A4D0S4 1761 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 CUTAO60888 179 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 MCAMP43121 646 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 MDM2Q00987 491 aaPredicted RBP17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 PPP2R3AQ06190 1150 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 KIFC2Q96AC6 838 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 UBXN6Q9BZV1 441 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 MAN1B1Q9UKM7 699 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 MRFAP1Q9Y605 127 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 UBN2Q6ZU65 1347 aa17.36■□□□□ 0.37
PCDHGB1-202ENST00000611598 KARSQ15046 597 aaKnown RBP17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 NTRK3Q16288 839 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 GRAMD1CQ8IYS0 662 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 FAM217BQ9NTX9 383 aaPredicted RBP17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 NFE2L3Q9Y4A8 694 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 MTF1Q14872 753 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 STK11IPQ8N1F8 1099 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 IRX2Q9BZI1 471 aaPredicted RBP17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 AKAP2Q9Y2D5 859 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 CDKL5O76039 1030 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 APPP05067 770 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 OAS2P29728 719 aaKnown RBP17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 DHX58Q96C10 678 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 MED15Q96RN5 788 aa17.35■□□□□ 0.37
PCDHGB1-202ENST00000611598 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 IARSP41252 1262 aaKnown RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 SLC9C2Q5TAH2 1124 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 RSRC2Q7L4I2 434 aaKnown RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 SMARCE1Q969G3 411 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 ECM29Q5VYK3 1845 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 ZBTB43O43298 467 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 STX10O60499 249 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 TPM1P09493 284 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 ZNF18P17022 549 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 SPECC1LQ69YQ0 1117 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 GPR161Q8N6U8 529 aaKnown RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 FAM89AQ96GI7 184 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 SLC26A6Q9BXS9 759 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 PARD6BQ9BYG5 372 aa17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 MRPL44Q9H9J2 332 aaKnown RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 ZNF330Q9Y3S2 320 aaPredicted RBP17.34■□□□□ 0.37
PCDHGB1-202ENST00000611598 GOLGA8AA7E2F4 631 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 GUCY1A2P33402 732 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 ADD2P35612 726 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 POSTNQ15063 836 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 TAF7LQ5H9L4 462 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 IGDCC4Q8TDY8 1250 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 ZSWIM4Q9H7M6 989 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 SAMSN1Q9NSI8 373 aaKnown RBP17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 A0A0U1RQJ8 604 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 BTBD18B2RXH4 712 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 MYO1BO43795 1136 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 CAPN2P17655 700 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 TOB1P50616 345 aaPredicted RBP17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 TRIM29Q14134 588 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 SMC1AQ14683 1233 aaKnown RBP17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 CPLX2Q6PUV4 134 aaKnown RBP17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 SYNE4Q8N205 404 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 ATRIPQ8WXE1 791 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 LY9Q9HBG7 655 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 SERTAD1Q9UHV2 236 aa17.33■□□□□ 0.36
PCDHGB1-202ENST00000611598 POLR2DO15514 142 aaKnown RBP17.32■□□□□ 0.36
PCDHGB1-202ENST00000611598 GYS2P54840 703 aa17.32■□□□□ 0.36
PCDHGB1-202ENST00000611598 PIH1D3Q9NQM4 214 aaKnown RBP17.32■□□□□ 0.36
PCDHGB1-202ENST00000611598 C1orf167Q5SNV9 1468 aa17.32■□□□□ 0.36
PCDHGB1-202ENST00000611598 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
PCDHGB1-202ENST00000611598 TEX13AQ9BXU3 409 aaPredicted RBP17.32■□□□□ 0.36
PCDHGB1-202ENST00000611598 KCNJ14Q9UNX9 436 aa17.32■□□□□ 0.36
PCDHGB1-202ENST00000611598 TMEM67Q5HYA8 995 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 NOSTRINQ8IVI9 506 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 CCDC12Q8WUD4 166 aaPredicted RBP17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 ZBTB9Q96C00 473 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 FUT8Q9BYC5 575 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 RIC1Q4ADV7 1423 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 ALS2Q96Q42 1657 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 MYH7P12883 1935 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 GOLGA6L9A6NEM1 432 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 SOWAHDA6NJG2 315 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 TULP2O00295 520 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 ATP8B1O43520 1251 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 RGS22Q8NE09 1264 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 ISCA1Q9BUE6 129 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 ARFGAP3Q9NP61 516 aa17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 FBXO2Q9UK22 296 aaPredicted RBP17.31■□□□□ 0.36
PCDHGB1-202ENST00000611598 COL18A1P39060 1754 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 METTL24Q5JXM2 366 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 USP49Q70CQ1 688 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms