RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 GNPATO15228 680 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 ZNF165P49910 485 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 RCAN1P53805 252 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 SSRP1Q08945 709 aaKnown RBP13.85□□□□□ -0.19
SRRT-213ENST00000611405 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 TRIM29Q14134 588 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 WTAPQ15007 396 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 STX1AQ16623 288 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 KRT40Q6A162 431 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 GJB4Q9NTQ9 266 aa13.85□□□□□ -0.19
SRRT-213ENST00000611405 CCNL1Q9UK58 526 aaPredicted RBP13.85□□□□□ -0.19
SRRT-213ENST00000611405 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
SRRT-213ENST00000611405 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
SRRT-213ENST00000611405 GOLGA6L6A8MZA4 724 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 RRP12Q5JTH9 1297 aaKnown RBP13.84□□□□□ -0.19
SRRT-213ENST00000611405 ADGRA1Q86SQ6 560 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 FMR1NBQ8N0W7 255 aaPredicted RBP13.84□□□□□ -0.19
SRRT-213ENST00000611405 PHKBQ93100 1093 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 A0A1B0GUL6 1792 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 FMNL1O95466 1100 aaPredicted RBP13.84□□□□□ -0.19
SRRT-213ENST00000611405 IFNAR1P17181 557 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 RIOK1Q9BRS2 568 aaKnown RBP13.84□□□□□ -0.19
SRRT-213ENST00000611405 DNAJC25Q9H1X3 360 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 COL1A1P02452 1464 aaPredicted RBP13.84□□□□□ -0.19
SRRT-213ENST00000611405 AIFM3Q96NN9 605 aa13.84□□□□□ -0.19
SRRT-213ENST00000611405 SPATA31A6Q5VVP1 1343 aa13.83□□□□□ -0.19
SRRT-213ENST00000611405 CHD4Q14839 1912 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 RANBP6O60518 1105 aaKnown RBP13.83□□□□□ -0.2
SRRT-213ENST00000611405 SMIM5Q71RC9 77 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 MYL10Q9BUA6 226 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 BRIP1Q9BX63 1249 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 NHSQ6T4R5 1651 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 COL24A1Q17RW2 1714 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 CCDC196A0A1B0GTZ2 297 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 WTIPA6NIX2 430 aaPredicted RBP13.83□□□□□ -0.2
SRRT-213ENST00000611405 GNL2Q13823 731 aaKnown RBP13.83□□□□□ -0.2
SRRT-213ENST00000611405 RTN1Q16799 776 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 TMED8Q6PL24 325 aaPredicted RBP13.83□□□□□ -0.2
SRRT-213ENST00000611405 ESR2Q92731 530 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 SLC26A6Q9BXS9 759 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 ANO10Q9NW15 660 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.83□□□□□ -0.2
SRRT-213ENST00000611405 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 BTAF1O14981 1849 aa13.83□□□□□ -0.2
SRRT-213ENST00000611405 ZBTB22O15209 634 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 U2AF2P26368 475 aaKnown RBP eCLIP13.82□□□□□ -0.23e-8■■■□□ 16.6
SRRT-213ENST00000611405 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 SDR42E1Q8WUS8 393 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 UBAC1Q9BSL1 405 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 PCP11498 1178 aaKnown RBP13.82□□□□□ -0.2
SRRT-213ENST00000611405 CMA1P23946 247 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
SRRT-213ENST00000611405 TRIM22Q8IYM9 498 aa13.82□□□□□ -0.2
SRRT-213ENST00000611405 ARHGEF1Q92888 912 aaKnown RBP13.82□□□□□ -0.2
SRRT-213ENST00000611405 A0A1B0GVL5 298 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 NDUFA8P51970 172 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 TERF1P54274 439 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 JMYQ8N9B5 988 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 PPP6R2O75170 966 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 IQCB1Q15051 598 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 PPP2R5BQ15173 497 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.81□□□□□ -0.2
SRRT-213ENST00000611405 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 ZKSCAN3Q9BRR0 538 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.81□□□□□ -0.2
SRRT-213ENST00000611405 CACNA1SQ13698 1873 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 CASZ1Q86V15 1759 aa13.81□□□□□ -0.2
SRRT-213ENST00000611405 GOLGA6L19H0YKK7 550 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 AXDND1Q5T1B0 1012 aaPredicted RBP13.8□□□□□ -0.2
SRRT-213ENST00000611405 MPNDQ8N594 471 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 PIBF1Q8WXW3 757 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 ZNF830Q96NB3 372 aaPredicted RBP13.8□□□□□ -0.2
SRRT-213ENST00000611405 TTC12Q9H892 705 aaPredicted RBP13.8□□□□□ -0.2
SRRT-213ENST00000611405 ZNF75DP51815 510 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
SRRT-213ENST00000611405 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
SRRT-213ENST00000611405 PLA2G4DQ86XP0 818 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 ZNF654Q8IZM8 581 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 NSUN4Q96CB9 384 aaKnown RBP13.8□□□□□ -0.2
SRRT-213ENST00000611405 TAF1P21675 1872 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 TPM2P07951 284 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 TM4SF1P30408 202 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 SEC23AQ15436 765 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 CRACR2BQ8N4Y2 399 aaPredicted RBP13.8□□□□□ -0.2
SRRT-213ENST00000611405 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 TRIM5Q9C035 493 aa13.8□□□□□ -0.2
SRRT-213ENST00000611405 DEXIO95424 95 aa13.79□□□□□ -0.2
SRRT-213ENST00000611405 FGRP09769 529 aa13.79□□□□□ -0.2
SRRT-213ENST00000611405 KLRK1P26718 216 aa13.79□□□□□ -0.2
SRRT-213ENST00000611405 C11orf57Q6ZUT1 292 aaPredicted RBP13.79□□□□□ -0.2
SRRT-213ENST00000611405 STK11IPQ8N1F8 1099 aa13.79□□□□□ -0.2
SRRT-213ENST00000611405 ZNF384Q8TF68 577 aa13.79□□□□□ -0.2
SRRT-213ENST00000611405 NAT10Q9H0A0 1025 aaKnown RBP13.79□□□□□ -0.2
SRRT-213ENST00000611405 IGSF3O75054 1194 aa13.79□□□□□ -0.2
SRRT-213ENST00000611405 RFC4P35249 363 aa13.79□□□□□ -0.2
SRRT-213ENST00000611405 MECOMQ03112 1051 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms