RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 CAVIN4Q5BKX8 364 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 OLFM4Q6UX06 510 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 SMARCE1Q969G3 411 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 RAI14Q9P0K7 980 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 LRP5O75197 1615 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 TNRC6CQ9HCJ0 1690 aaKnown RBP18.5■□□□□ 0.55
RTN1-209ENST00000611068 PATL2C9JE40 543 aaKnown RBP18.5■□□□□ 0.55
RTN1-209ENST00000611068 PRKAB2O43741 272 aa18.5■□□□□ 0.55
RTN1-209ENST00000611068 RFX7Q2KHR2 1363 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 UBR3Q6ZT12 1888 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 LAMB2P55268 1798 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 POLRMTO00411 1230 aaKnown RBP18.49■□□□□ 0.55
RTN1-209ENST00000611068 ZFYP08048 801 aaPredicted RBP18.49■□□□□ 0.55
RTN1-209ENST00000611068 ZNF512BQ96KM6 892 aaPredicted RBP18.49■□□□□ 0.55
RTN1-209ENST00000611068 GPHNQ9NQX3 736 aaPredicted RBP18.49■□□□□ 0.55
RTN1-209ENST00000611068 USP27XA6NNY8 438 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 MBD4O95243 580 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 LRRFIP1Q32MZ4 808 aaKnown RBP18.49■□□□□ 0.55
RTN1-209ENST00000611068 ZSCAN25Q6NSZ9 544 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 Q6ZUG5 572 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 ADGRA1Q86SQ6 560 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 TXLNBQ8N3L3 684 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 AIDAQ96BJ3 306 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 DSCC1Q9BVC3 393 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 JRKLQ9Y4A0 524 aa18.49■□□□□ 0.55
RTN1-209ENST00000611068 RPAP1Q9BWH6 1393 aaPredicted RBP18.48■□□□□ 0.55
RTN1-209ENST00000611068 E7EWF7 191 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 MAP3K12Q12852 859 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 CUL4AQ13619 759 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 TOB2Q14106 344 aaPredicted RBP18.48■□□□□ 0.55
RTN1-209ENST00000611068 UBE4AQ14139 1066 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 ZSCAN26Q16670 478 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 CNPY2Q9Y2B0 182 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 CEP83Q9Y592 693 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 CASZ1Q86V15 1759 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 TCRBV5S4A2TA0A5A2 114 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 PLSCR1O15162 318 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 PNMA6AP0CW24 399 aaPredicted RBP18.48■□□□□ 0.55
RTN1-209ENST00000611068 NKX2-3Q8TAU0 364 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 TM6SF1Q9BZW5 370 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.48■□□□□ 0.55
RTN1-209ENST00000611068 ZNF804BA4D1E1 1349 aa18.48■□□□□ 0.55
RTN1-209ENST00000611068 ST3GAL1Q11201 340 aa18.47■□□□□ 0.55
RTN1-209ENST00000611068 GRAPQ13588 217 aa18.47■□□□□ 0.55
RTN1-209ENST00000611068 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
RTN1-209ENST00000611068 AKT1S1Q96B36 256 aa18.47■□□□□ 0.55
RTN1-209ENST00000611068 ERO1AQ96HE7 468 aa18.47■□□□□ 0.55
RTN1-209ENST00000611068 BRMS1Q9HCU9 246 aa18.47■□□□□ 0.55
RTN1-209ENST00000611068 RAB11FIP4Q86YS3 637 aa18.47■□□□□ 0.55
RTN1-209ENST00000611068 BRF1Q92994 677 aa18.47■□□□□ 0.55
RTN1-209ENST00000611068 PDGFDQ9GZP0 370 aaPredicted RBP18.47■□□□□ 0.55
RTN1-209ENST00000611068 SRCAPQ6ZRS2 3230 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 MMP10P09238 476 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 CCDC172P0C7W6 258 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 H2AFXP16104 143 aaPredicted RBP18.46■□□□□ 0.55
RTN1-209ENST00000611068 CYP7A1P22680 504 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 HIBADHP31937 336 aaKnown RBP18.46■□□□□ 0.55
RTN1-209ENST00000611068 CLCN6P51797 869 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 SRLQ86TD4 932 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 PACS2Q86VP3 889 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 DRC7Q8IY82 874 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 LCORLQ8N3X6 602 aa18.46■□□□□ 0.55
RTN1-209ENST00000611068 ZCCHC17Q9NP64 241 aaKnown RBP18.46■□□□□ 0.55
RTN1-209ENST00000611068 GNL3LQ9NVN8 582 aaKnown RBP18.46■□□□□ 0.55
RTN1-209ENST00000611068 COL1A1P02452 1464 aaPredicted RBP18.46■□□□□ 0.55
RTN1-209ENST00000611068 GPSM2P81274 684 aa18.45■□□□□ 0.54
RTN1-209ENST00000611068 LRRN4CLQ8ND94 238 aa18.45■□□□□ 0.54
RTN1-209ENST00000611068 TAOK2Q9UL54 1235 aa18.45■□□□□ 0.54
RTN1-209ENST00000611068 SMIM22K7EJ46 135 aa18.45■□□□□ 0.54
RTN1-209ENST00000611068 RGL2O15211 777 aa18.45■□□□□ 0.54
RTN1-209ENST00000611068 ERCC6LQ2NKX8 1250 aa18.45■□□□□ 0.54
RTN1-209ENST00000611068 DEFB132Q7Z7B7 95 aa18.45■□□□□ 0.54
RTN1-209ENST00000611068 CACTINQ8WUQ7 758 aaKnown RBP18.45■□□□□ 0.54
RTN1-209ENST00000611068 ZNF219Q9P2Y4 722 aaPredicted RBP18.45■□□□□ 0.54
RTN1-209ENST00000611068 RRP15Q9Y3B9 282 aaKnown RBP18.45■□□□□ 0.54
RTN1-209ENST00000611068 APOBRQ0VD83 1088 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 UBE3CQ15386 1083 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 STRBPQ96SI9 672 aaKnown RBP18.44■□□□□ 0.54
RTN1-209ENST00000611068 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 E2F4Q16254 413 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 IMMTQ16891 758 aaKnown RBP18.44■□□□□ 0.54
RTN1-209ENST00000611068 SLC4A8Q2Y0W8 1093 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 TEX35Q5T0J7 233 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.44■□□□□ 0.54
RTN1-209ENST00000611068 SDR42E1Q8WUS8 393 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 SMC3Q9UQE7 1217 aa18.44■□□□□ 0.54
RTN1-209ENST00000611068 ZNF213O14771 459 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 DYNLL1P63167 89 aaKnown RBP18.43■□□□□ 0.54
RTN1-209ENST00000611068 KRT32Q14532 448 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 ANKRD2Q9GZV1 360 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 PNPLA7Q6ZV29 1317 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 GJB2P29033 226 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 PRDX5P30044 214 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 FOSBP53539 338 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 CCT2P78371 535 aaKnown RBP18.43■□□□□ 0.54
RTN1-209ENST00000611068 CTDSPL2Q05D32 466 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 FBXO33Q7Z6M2 555 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 LUZP1Q86V48 1076 aa18.43■□□□□ 0.54
RTN1-209ENST00000611068 SLC4A4Q9Y6R1 1079 aa18.42■□□□□ 0.54
RTN1-209ENST00000611068 UFL1O94874 794 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms