RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 DEFB118Q96PH6 123 aa21.63■■□□□ 1.05
CHMP4A-211ENST00000609024 FAM198AQ9UFP1 575 aa21.63■■□□□ 1.05
CHMP4A-211ENST00000609024 DENND2AQ9ULE3 1009 aa21.63■■□□□ 1.05
CHMP4A-211ENST00000609024 MGAMO43451 1857 aa21.62■■□□□ 1.05
CHMP4A-211ENST00000609024 DLL1O00548 723 aa21.62■■□□□ 1.05
CHMP4A-211ENST00000609024 ELNP15502 786 aa21.62■■□□□ 1.05
CHMP4A-211ENST00000609024 ATP2B3Q16720 1220 aa21.62■■□□□ 1.05
CHMP4A-211ENST00000609024 SLF2Q8IX21 1173 aa21.62■■□□□ 1.05
CHMP4A-211ENST00000609024 CEP126Q9P2H0 1117 aa21.62■■□□□ 1.05
CHMP4A-211ENST00000609024 SLC45A1Q9Y2W3 748 aa21.62■■□□□ 1.05
CHMP4A-211ENST00000609024 ENTPD3O75355 529 aa21.61■■□□□ 1.05
CHMP4A-211ENST00000609024 PTPRAP18433 802 aa21.61■■□□□ 1.05
CHMP4A-211ENST00000609024 RGS3P49796 1198 aa21.61■■□□□ 1.05
CHMP4A-211ENST00000609024 DZIP1Q86YF9 867 aaKnown RBP21.61■■□□□ 1.05
CHMP4A-211ENST00000609024 PNMA3Q9UL41 463 aa21.61■■□□□ 1.05
CHMP4A-211ENST00000609024 SEMA3EO15041 775 aa21.6■■□□□ 1.05
CHMP4A-211ENST00000609024 IRF5Q13568 498 aa21.6■■□□□ 1.05
CHMP4A-211ENST00000609024 FAM9BQ8IZU0 186 aa21.6■■□□□ 1.05
CHMP4A-211ENST00000609024 MRPL50Q8N5N7 158 aaKnown RBP21.6■■□□□ 1.05
CHMP4A-211ENST00000609024 USP44Q9H0E7 712 aa21.6■■□□□ 1.05
CHMP4A-211ENST00000609024 SIL1Q9H173 461 aa21.6■■□□□ 1.05
CHMP4A-211ENST00000609024 AFG3L2Q9Y4W6 797 aa21.6■■□□□ 1.05
CHMP4A-211ENST00000609024 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
CHMP4A-211ENST00000609024 NECAB2Q7Z6G3 386 aa21.59■■□□□ 1.05
CHMP4A-211ENST00000609024 ZFPM1Q8IX07 1006 aa21.59■■□□□ 1.05
CHMP4A-211ENST00000609024 PRO3102Q9H379 93 aa21.59■■□□□ 1.05
CHMP4A-211ENST00000609024 SALL1Q9NSC2 1324 aa21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 PHF20L1A8MW92 1017 aa21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 CTNND1O60716 968 aaKnown RBP21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 PICALMQ13492 652 aa21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 ANKRD13CQ8N6S4 541 aa21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 IDI2Q9BXS1 227 aa21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 STAP2Q9UGK3 403 aa21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 FBXO3Q9UK99 471 aa21.58■■□□□ 1.05
CHMP4A-211ENST00000609024 DOCK2Q92608 1830 aa21.57■■□□□ 1.04
CHMP4A-211ENST00000609024 PAWRQ96IZ0 340 aaKnown RBP21.57■■□□□ 1.04
CHMP4A-211ENST00000609024 ABCF2Q9UG63 623 aa21.57■■□□□ 1.04
CHMP4A-211ENST00000609024 AGTPBP1Q9UPW5 1226 aa21.57■■□□□ 1.04
CHMP4A-211ENST00000609024 SZT2Q5T011 3432 aa21.57■■□□□ 1.04
CHMP4A-211ENST00000609024 CIAO1O76071 339 aa21.56■■□□□ 1.04
CHMP4A-211ENST00000609024 RFX5P48382 616 aaPredicted RBP21.56■■□□□ 1.04
CHMP4A-211ENST00000609024 SPTY2D1Q68D10 685 aaPredicted RBP21.56■■□□□ 1.04
CHMP4A-211ENST00000609024 ATG9AQ7Z3C6 839 aa21.56■■□□□ 1.04
CHMP4A-211ENST00000609024 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
CHMP4A-211ENST00000609024 UBTFL1P0CB47 393 aaPredicted RBP21.55■■□□□ 1.04
CHMP4A-211ENST00000609024 PABPC4Q13310 644 aaKnown RBP eCLIP21.55■■□□□ 1.043e-6■□□□□ 9
CHMP4A-211ENST00000609024 PAK6Q9NQU5 681 aaPredicted RBP21.55■■□□□ 1.04
CHMP4A-211ENST00000609024 IL15P40933 162 aaPredicted RBP21.54■■□□□ 1.04
CHMP4A-211ENST00000609024 PHKA1P46020 1223 aa21.54■■□□□ 1.04
CHMP4A-211ENST00000609024 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.54■■□□□ 1.04
CHMP4A-211ENST00000609024 ATRNL1Q5VV63 1379 aa21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 BTDP43251 543 aa21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 FAM110CQ1W6H9 321 aa21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 C7orf61Q8IZ16 206 aa21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 ANKLE1Q8NAG6 615 aa21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 LRCH3Q96II8 777 aa21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 MYH2Q9UKX2 1941 aa21.53■■□□□ 1.04
CHMP4A-211ENST00000609024 DOCK1Q14185 1865 aa21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 DDTLA6NHG4 134 aaPredicted RBP21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 HMGCRP04035 888 aa21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 GCLCP48506 637 aaPredicted RBP21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 CCDC102BQ68D86 513 aa21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 CRISPLD2Q9H0B8 497 aa21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 HMX1Q9NP08 348 aaPredicted RBP21.52■■□□□ 1.04
CHMP4A-211ENST00000609024 GAKO14976 1311 aa21.52■■□□□ 1.03
CHMP4A-211ENST00000609024 RANBP2P49792 3224 aaKnown RBP21.51■■□□□ 1.03
CHMP4A-211ENST00000609024 MAP3K10Q02779 954 aa21.51■■□□□ 1.03
CHMP4A-211ENST00000609024 SH3BP5LQ7L8J4 393 aa21.51■■□□□ 1.03
CHMP4A-211ENST00000609024 PROCA1Q8NCQ7 364 aaPredicted RBP21.51■■□□□ 1.03
CHMP4A-211ENST00000609024 NBPF3Q9H094 633 aa21.51■■□□□ 1.03
CHMP4A-211ENST00000609024 SOX1O00570 391 aaPredicted RBP21.5■■□□□ 1.03
CHMP4A-211ENST00000609024 TREML2Q5T2D2 321 aa21.5■■□□□ 1.03
CHMP4A-211ENST00000609024 ERICH6Q7L0X2 663 aa21.5■■□□□ 1.03
CHMP4A-211ENST00000609024 TBC1D2Q9BYX2 928 aa21.5■■□□□ 1.03
CHMP4A-211ENST00000609024 SPP2Q13103 211 aa21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 CCDC84Q86UT8 332 aaPredicted RBP21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 ZNF280CQ8ND82 737 aa21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 DIS3LQ8TF46 1054 aaKnown RBP21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 FAM163AQ96GL9 167 aaPredicted RBP21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 OSBPL5Q9H0X9 879 aaPredicted RBP21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 DDX4Q9NQI0 724 aaKnown RBP21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 ZMYND8Q9ULU4 1186 aaPredicted RBP21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 MROH7-TTC4A0A0A0MT08 1334 aa21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 RPTORQ8N122 1335 aa21.49■■□□□ 1.03
CHMP4A-211ENST00000609024 E9PSI1 815 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 TBC1D12O60347 775 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 LDHCP07864 332 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 ADORA1P30542 326 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 BMP8BP34820 402 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 GSTO1P78417 241 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 RASGRF1Q13972 1273 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 AS3MTQ9HBK9 375 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 SMC4Q9NTJ3 1288 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 AKAP2Q9Y2D5 859 aa21.48■■□□□ 1.03
CHMP4A-211ENST00000609024 PTPRFP10586 1907 aa21.47■■□□□ 1.03
CHMP4A-211ENST00000609024 DEFB123Q8N688 67 aa21.47■■□□□ 1.03
CHMP4A-211ENST00000609024 C11orf49Q9H6J7 331 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms