RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 MICU3Q86XE3 530 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 VGLL2Q8N8G2 317 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 PDE8BO95263 885 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 ATP1A3P13637 1013 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 RXRAP19793 462 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 ARID4AP29374 1257 aaPredicted RBP16.86■□□□□ 0.29
CTCFL-219ENST00000608720 LIFRP42702 1097 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 CCDC93Q567U6 631 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 TMEM67Q5HYA8 995 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 WASF1Q92558 559 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 STRBPQ96SI9 672 aaKnown RBP16.86■□□□□ 0.29
CTCFL-219ENST00000608720 LY9Q9HBG7 655 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.86■□□□□ 0.29
CTCFL-219ENST00000608720 V9GYY5 206 aaPredicted RBP16.86■□□□□ 0.29
CTCFL-219ENST00000608720 STK36Q9NRP7 1315 aa16.86■□□□□ 0.29
CTCFL-219ENST00000608720 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
CTCFL-219ENST00000608720 ZBTB22O15209 634 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 SSRP1Q08945 709 aaKnown RBP16.85■□□□□ 0.29
CTCFL-219ENST00000608720 PNOCQ13519 176 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 KRBA2Q6ZNG9 492 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 CNNM3Q8NE01 707 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 NKX2-3Q8TAU0 364 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 HOOK1Q9UJC3 728 aaKnown RBP16.85■□□□□ 0.29
CTCFL-219ENST00000608720 KCNH3Q9ULD8 1083 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 TCRBV5S4A2TA0A5A2 114 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 TMX1Q9H3N1 280 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 SENP2Q9HC62 589 aa16.85■□□□□ 0.29
CTCFL-219ENST00000608720 FAM217BQ9NTX9 383 aaPredicted RBP16.85■□□□□ 0.29
CTCFL-219ENST00000608720 PATL2C9JE40 543 aaKnown RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 IRS4O14654 1257 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 RANBP6O60518 1105 aaKnown RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 ETF1P62495 437 aaKnown RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 CFAP100Q494V2 611 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 LONRF3Q496Y0 759 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 FBXO38Q6PIJ6 1188 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 METTL16Q86W50 562 aaKnown RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 HOMER1Q86YM7 354 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 VSTM4Q8IW00 320 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 KRI1Q8N9T8 703 aaKnown RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 CLIC6Q96NY7 704 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 SLC12A7Q9Y666 1083 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 DDX60Q8IY21 1712 aaKnown RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-219ENST00000608720 HLFQ16534 295 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 FCHSD1Q86WN1 690 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 CNNM2Q9H8M5 875 aa16.84■□□□□ 0.29
CTCFL-219ENST00000608720 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.84■□□□□ 0.292e-7■□□□□ 10.4
CTCFL-219ENST00000608720 UBN2Q6ZU65 1347 aa16.83■□□□□ 0.29
CTCFL-219ENST00000608720 PHLPP2Q6ZVD8 1323 aa16.83■□□□□ 0.29
CTCFL-219ENST00000608720 TOM1O60784 492 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
CTCFL-219ENST00000608720 GPTP24298 496 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 CYP2C19P33261 490 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 PHKA1P46020 1223 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 SAFBQ15424 915 aaKnown RBP eCLIP16.83■□□□□ 0.28
CTCFL-219ENST00000608720 BRINP3Q76B58 766 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 LPIN2Q92539 896 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 DPF2Q92785 391 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 SLC26A6Q9BXS9 759 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 WWC3Q9ULE0 1092 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 ASAP1Q9ULH1 1129 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 PCDHA5Q9Y5H7 936 aa16.83■□□□□ 0.28
CTCFL-219ENST00000608720 VGLL3A8MV65 326 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 IFIT3O14879 490 aaKnown RBP16.82■□□□□ 0.28
CTCFL-219ENST00000608720 PDE8AO60658 829 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 IFNAR1P17181 557 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 EVA1CP58658 441 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 NOSTRINQ8IVI9 506 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 IFNL3Q8IZI9 196 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 PIGBQ92521 554 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 KRT23Q9C075 422 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 ZSWIM5Q9P217 1185 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
CTCFL-219ENST00000608720 PUM3Q15397 648 aaKnown RBP16.82■□□□□ 0.28
CTCFL-219ENST00000608720 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
CTCFL-219ENST00000608720 NAPBQ9H115 298 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 FANCLQ9NW38 375 aa16.82■□□□□ 0.28
CTCFL-219ENST00000608720 TRMT112Q9UI30 125 aaKnown RBP16.82■□□□□ 0.28
CTCFL-219ENST00000608720 ZSCAN12O43309 604 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 MAP3K12Q12852 859 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 BMS1Q14692 1282 aaKnown RBP16.81■□□□□ 0.28
CTCFL-219ENST00000608720 SRRTQ9BXP5 876 aaKnown RBP16.81■□□□□ 0.28
CTCFL-219ENST00000608720 STRN4Q9NRL3 753 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 H2AFXP16104 143 aaPredicted RBP16.81■□□□□ 0.28
CTCFL-219ENST00000608720 CAPN2P17655 700 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 NOL10Q9BSC4 688 aaKnown RBP16.81■□□□□ 0.28
CTCFL-219ENST00000608720 MYL10Q9BUA6 226 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 DNAI1Q9UI46 699 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 TAOK2Q9UL54 1235 aa16.81■□□□□ 0.28
CTCFL-219ENST00000608720 NID2Q14112 1375 aa16.8■□□□□ 0.28
CTCFL-219ENST00000608720 MMP1P03956 469 aa16.8■□□□□ 0.28
CTCFL-219ENST00000608720 FGFR2P21802 821 aa16.8■□□□□ 0.28
CTCFL-219ENST00000608720 ERCC6LQ2NKX8 1250 aa16.8■□□□□ 0.28
CTCFL-219ENST00000608720 AKNAD1Q5T1N1 836 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms