RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 NBPF12Q5TAG4 269 aaPredicted RBP12.56□□□□□ -0.4
LINC01954-201ENST00000607419 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
LINC01954-201ENST00000607419 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
LINC01954-201ENST00000607419 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
LINC01954-201ENST00000607419 PDS5AQ29RF7 1337 aaKnown RBP12.56□□□□□ -0.4
LINC01954-201ENST00000607419 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
LINC01954-201ENST00000607419 MCAMP43121 646 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 RASGRF1Q13972 1273 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 TTC22Q5TAA0 569 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 STRIP1Q5VSL9 837 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 CERS5Q8N5B7 392 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 SPATA5Q8NB90 893 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 SLC17A8Q8NDX2 589 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 MS4A4AQ96JQ5 239 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 HAUS7Q99871 368 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 ARHGAP39Q9C0H5 1083 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 PRO3102Q9H379 93 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 BOLA2Q9H3K6 86 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
LINC01954-201ENST00000607419 IQSEC3Q9UPP2 1182 aaPredicted RBP12.55□□□□□ -0.4
LINC01954-201ENST00000607419 ZBTB48P10074 688 aaPredicted RBP12.54□□□□□ -0.4
LINC01954-201ENST00000607419 OGFOD1Q8N543 542 aa12.54□□□□□ -0.4
LINC01954-201ENST00000607419 SH3TC2Q8TF17 1288 aa12.54□□□□□ -0.4
LINC01954-201ENST00000607419 TMEM106CQ9BVX2 250 aa12.54□□□□□ -0.4
LINC01954-201ENST00000607419 UNC80Q8N2C7 3258 aa12.54□□□□□ -0.4
LINC01954-201ENST00000607419 FAM205AQ6ZU69 1335 aa12.54□□□□□ -0.4
LINC01954-201ENST00000607419 COL1A1P02452 1464 aaPredicted RBP12.53□□□□□ -0.4
LINC01954-201ENST00000607419 ZAP70P43403 619 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 GTF2IP78347 998 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 TTF1Q15361 905 aaPredicted RBP12.53□□□□□ -0.4
LINC01954-201ENST00000607419 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
LINC01954-201ENST00000607419 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 WDR66Q8TBY9 1149 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 SHISA4Q96DD7 197 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 PRMT6Q96LA8 375 aaPredicted RBP12.53□□□□□ -0.4
LINC01954-201ENST00000607419 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
LINC01954-201ENST00000607419 SNRKQ9NRH2 765 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 SALL1Q9NSC2 1324 aa12.53□□□□□ -0.4
LINC01954-201ENST00000607419 CLRN2A0PK11 232 aa12.52□□□□□ -0.41
LINC01954-201ENST00000607419 SOX1O00570 391 aaPredicted RBP12.52□□□□□ -0.41
LINC01954-201ENST00000607419 CTGFP29279 349 aa12.52□□□□□ -0.41
LINC01954-201ENST00000607419 CHAF1AQ13111 956 aaPredicted RBP12.52□□□□□ -0.41
LINC01954-201ENST00000607419 MTFR1Q15390 333 aa12.52□□□□□ -0.41
LINC01954-201ENST00000607419 SLC4A8Q2Y0W8 1093 aa12.52□□□□□ -0.41
LINC01954-201ENST00000607419 BMP2KLQ5H9B9 411 aa12.52□□□□□ -0.41
LINC01954-201ENST00000607419 ZGPATQ8N5A5 531 aaKnown RBP12.52□□□□□ -0.41
LINC01954-201ENST00000607419 TBC1D22AQ8WUA7 517 aa12.52□□□□□ -0.41
LINC01954-201ENST00000607419 MGAMO43451 1857 aa12.52□□□□□ -0.41
LINC01954-201ENST00000607419 CDK5RAP2Q96SN8 1893 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 GOLIM4O00461 696 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 IGSF3O75054 1194 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 CYP2E1P05181 493 aaPredicted RBP12.51□□□□□ -0.41
LINC01954-201ENST00000607419 GSPT1P15170 499 aaKnown RBP12.51□□□□□ -0.41
LINC01954-201ENST00000607419 FKBP1AP62942 108 aaKnown RBP12.51□□□□□ -0.41
LINC01954-201ENST00000607419 SLC9C1Q4G0N8 1177 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 PI16Q6UXB8 463 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 FAM43AQ8N2R8 423 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 BRI3BPQ8WY22 251 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 EVI5LQ96CN4 794 aa12.51□□□□□ -0.41
LINC01954-201ENST00000607419 ECM2O94769 699 aaPredicted RBP12.5□□□□□ -0.41
LINC01954-201ENST00000607419 MAP4K4O95819 1239 aaPredicted RBP12.5□□□□□ -0.41
LINC01954-201ENST00000607419 SPTY2D1Q68D10 685 aaPredicted RBP12.5□□□□□ -0.41
LINC01954-201ENST00000607419 TICAM2Q86XR7 235 aa12.5□□□□□ -0.41
LINC01954-201ENST00000607419 RILPL2Q969X0 211 aa12.5□□□□□ -0.41
LINC01954-201ENST00000607419 OPTNQ96CV9 577 aa12.5□□□□□ -0.41
LINC01954-201ENST00000607419 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
LINC01954-201ENST00000607419 NDUFB9Q9Y6M9 179 aa12.5□□□□□ -0.41
LINC01954-201ENST00000607419 MYO3BQ8WXR4 1341 aa12.5□□□□□ -0.41
LINC01954-201ENST00000607419 F8W031 263 aaPredicted RBP12.49□□□□□ -0.41
LINC01954-201ENST00000607419 SDSP20132 328 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
LINC01954-201ENST00000607419 MFSD14BQ5SR56 506 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.49□□□□□ -0.41
LINC01954-201ENST00000607419 TBC1D9Q6ZT07 1266 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 UBE2Q1Q7Z7E8 422 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 NBPF11Q86T75 865 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 KBTBD3Q8NAB2 608 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 MTMR14Q8NCE2 650 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 DPF3Q92784 378 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 EDC3Q96F86 508 aaKnown RBP12.49□□□□□ -0.41
LINC01954-201ENST00000607419 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 ANTXR1Q9H6X2 564 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 PIH1D3Q9NQM4 214 aaKnown RBP12.49□□□□□ -0.41
LINC01954-201ENST00000607419 LRP2BPQ9P2M1 347 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 ABCF2Q9UG63 623 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 JAG2Q9Y219 1238 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 SUGT1Q9Y2Z0 365 aa12.49□□□□□ -0.41
LINC01954-201ENST00000607419 RFX7Q2KHR2 1363 aa12.48□□□□□ -0.41
LINC01954-201ENST00000607419 PPP1R12BO60237 982 aaPredicted RBP12.48□□□□□ -0.41
LINC01954-201ENST00000607419 LDHBP07195 334 aaKnown RBP12.48□□□□□ -0.41
LINC01954-201ENST00000607419 MAP3K12Q12852 859 aa12.48□□□□□ -0.41
LINC01954-201ENST00000607419 RASA3Q14644 834 aa12.48□□□□□ -0.41
LINC01954-201ENST00000607419 DLGAP5Q15398 846 aa12.48□□□□□ -0.41
LINC01954-201ENST00000607419 CFAP100Q494V2 611 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms