RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 OSBPP22059 807 aa18.38■□□□□ 0.53
CTSA-216ENST00000607212 FCGRTP55899 365 aa18.38■□□□□ 0.53
CTSA-216ENST00000607212 TFCP2Q12800 502 aa18.38■□□□□ 0.53
CTSA-216ENST00000607212 FASTKD5Q7L8L6 764 aaKnown RBP18.38■□□□□ 0.53
CTSA-216ENST00000607212 TRIM47Q96LD4 638 aa18.38■□□□□ 0.53
CTSA-216ENST00000607212 MGAMO43451 1857 aa18.37■□□□□ 0.53
CTSA-216ENST00000607212 GRK4P32298 578 aa18.37■□□□□ 0.53
CTSA-216ENST00000607212 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
CTSA-216ENST00000607212 IDI2Q9BXS1 227 aa18.37■□□□□ 0.53
CTSA-216ENST00000607212 DOCK1Q14185 1865 aa18.37■□□□□ 0.53
CTSA-216ENST00000607212 MROH7-TTC4A0A0A0MT08 1334 aa18.36■□□□□ 0.53
CTSA-216ENST00000607212 GAKO14976 1311 aa18.36■□□□□ 0.53
CTSA-216ENST00000607212 CTGFP29279 349 aa18.36■□□□□ 0.53
CTSA-216ENST00000607212 RARSP54136 660 aaKnown RBP18.36■□□□□ 0.53
CTSA-216ENST00000607212 UBXN2AP68543 259 aa18.36■□□□□ 0.53
CTSA-216ENST00000607212 MTFR1Q15390 333 aa18.36■□□□□ 0.53
CTSA-216ENST00000607212 SMCR8Q8TEV9 937 aaPredicted RBP18.36■□□□□ 0.53
CTSA-216ENST00000607212 DPF3Q92784 378 aa18.36■□□□□ 0.53
CTSA-216ENST00000607212 FRAT1Q92837 279 aaPredicted RBP18.36■□□□□ 0.53
CTSA-216ENST00000607212 TAOK2Q9UL54 1235 aa18.36■□□□□ 0.53
CTSA-216ENST00000607212 DDTLA6NHG4 134 aaPredicted RBP18.35■□□□□ 0.53
CTSA-216ENST00000607212 TRIM75PA6NK02 468 aa18.35■□□□□ 0.53
CTSA-216ENST00000607212 IPO8O15397 1037 aaKnown RBP18.35■□□□□ 0.53
CTSA-216ENST00000607212 PTPRAP18433 802 aa18.35■□□□□ 0.53
CTSA-216ENST00000607212 GSTO1P78417 241 aa18.35■□□□□ 0.53
CTSA-216ENST00000607212 G3BP1Q13283 466 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTSA-216ENST00000607212 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
CTSA-216ENST00000607212 ADGRA2Q96PE1 1338 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 A0A0G2JLL6 359 aaPredicted RBP18.34■□□□□ 0.53
CTSA-216ENST00000607212 LDHCP07864 332 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 MECOMQ03112 1051 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 PRKCZQ05513 592 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 MOGSQ13724 837 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 GPAT2Q6NUI2 795 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 PRRT2Q7Z6L0 340 aaPredicted RBP18.34■□□□□ 0.53
CTSA-216ENST00000607212 NKX2-3Q8TAU0 364 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 NOL10Q9BSC4 688 aaKnown RBP18.34■□□□□ 0.53
CTSA-216ENST00000607212 RNF208Q9H0X6 261 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.34■□□□□ 0.53
CTSA-216ENST00000607212 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
CTSA-216ENST00000607212 HTTP42858 3142 aa18.34■□□□□ 0.53
CTSA-216ENST00000607212 PDS5AQ29RF7 1337 aaKnown RBP18.33■□□□□ 0.53
CTSA-216ENST00000607212 PHF20L1A8MW92 1017 aa18.33■□□□□ 0.52
CTSA-216ENST00000607212 CTNND1O60716 968 aaKnown RBP18.33■□□□□ 0.52
CTSA-216ENST00000607212 SLURP2P0DP57 97 aa18.33■□□□□ 0.52
CTSA-216ENST00000607212 SH3BP5LQ7L8J4 393 aa18.33■□□□□ 0.52
CTSA-216ENST00000607212 ARHGAP45Q92619 1136 aa18.33■□□□□ 0.52
CTSA-216ENST00000607212 FAM196BA6NMK8 535 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 TNPO2O14787 897 aaKnown RBP18.32■□□□□ 0.52
CTSA-216ENST00000607212 GNAI2P04899 355 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 CCL5P13501 91 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
CTSA-216ENST00000607212 TBC1D9Q6ZT07 1266 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 CCDC84Q86UT8 332 aaPredicted RBP18.32■□□□□ 0.52
CTSA-216ENST00000607212 SPATA5Q8NB90 893 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 LRP2BPQ9P2M1 347 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.32■□□□□ 0.52
CTSA-216ENST00000607212 AFG3L2Q9Y4W6 797 aa18.32■□□□□ 0.52
CTSA-216ENST00000607212 PTPRFP10586 1907 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 ATRNL1Q5VV63 1379 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 H0YGN5 161 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 BCRP11274 1271 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 PI16Q6UXB8 463 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 SLAIN1Q8ND83 568 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 FAM163AQ96GL9 167 aaPredicted RBP18.31■□□□□ 0.52
CTSA-216ENST00000607212 HMG20BQ9P0W2 317 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 GABRQQ9UN88 632 aa18.31■□□□□ 0.52
CTSA-216ENST00000607212 COLQQ9Y215 455 aaPredicted RBP18.31■□□□□ 0.52
CTSA-216ENST00000607212 RFX7Q2KHR2 1363 aa18.3■□□□□ 0.52
CTSA-216ENST00000607212 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
CTSA-216ENST00000607212 TEX11Q8IYF3 940 aa18.3■□□□□ 0.52
CTSA-216ENST00000607212 PNMA3Q9UL41 463 aa18.3■□□□□ 0.52
CTSA-216ENST00000607212 PHIPQ8WWQ0 1821 aa18.3■□□□□ 0.52
CTSA-216ENST00000607212 ATAD5Q96QE3 1844 aa18.3■□□□□ 0.52
CTSA-216ENST00000607212 CENPFP49454 3210 aa18.29■□□□□ 0.52
CTSA-216ENST00000607212 ADCY3O60266 1144 aa18.29■□□□□ 0.52
CTSA-216ENST00000607212 TTC39AQ5SRH9 613 aa18.29■□□□□ 0.52
CTSA-216ENST00000607212 ANKRD13CQ8N6S4 541 aa18.29■□□□□ 0.52
CTSA-216ENST00000607212 HTATIP2Q9BUP3 242 aa18.29■□□□□ 0.52
CTSA-216ENST00000607212 TRIM34Q9BYJ4 488 aa18.29■□□□□ 0.52
CTSA-216ENST00000607212 SLC45A1Q9Y2W3 748 aa18.29■□□□□ 0.52
CTSA-216ENST00000607212 GJB1P08034 283 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 UQCRFS1P1P0C7P4 283 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 TRIM27P14373 513 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 FLT3LGP49771 235 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 RHBDL3P58872 404 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 MTX1Q13505 466 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 ATF7IPQ6VMQ6 1270 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 COA7Q96BR5 231 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 NSUN4Q96CB9 384 aaKnown RBP18.28■□□□□ 0.52
CTSA-216ENST00000607212 SHISA4Q96DD7 197 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 AGTPBP1Q9UPW5 1226 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 TNNQ9UQP3 1299 aa18.28■□□□□ 0.52
CTSA-216ENST00000607212 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
CTSA-216ENST00000607212 ZBTB22O15209 634 aa18.27■□□□□ 0.52
CTSA-216ENST00000607212 BCAR3O75815 825 aa18.27■□□□□ 0.52
CTSA-216ENST00000607212 ELNP15502 786 aa18.27■□□□□ 0.52
CTSA-216ENST00000607212 GJA8P48165 433 aa18.27■□□□□ 0.52
CTSA-216ENST00000607212 SPP2Q13103 211 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms