RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 DAGLAQ9Y4D2 1042 aa19.34■□□□□ 0.69
NEDD8-MDP1-204ENST00000605847 PTPRAP18433 802 aa19.33■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 MAGEA10P43363 369 aaPredicted RBP19.33■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 NFIAQ12857 509 aa19.33■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 ANKRD13CQ8N6S4 541 aa19.33■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 COL25A1Q9BXS0 654 aaPredicted RBP19.33■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 UBE2OQ9C0C9 1292 aaKnown RBP19.33■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 USP40Q9NVE5 1235 aa19.33■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 EXOSC9Q06265 439 aaKnown RBP19.32■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 DIXDC1Q155Q3 683 aa19.32■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 AFG3L2Q9Y4W6 797 aa19.32■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 LRRFIP2Q9Y608 721 aaKnown RBP19.32■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 KIF16BQ96L93 1317 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 HMGCRP04035 888 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 PUM3Q15397 648 aaKnown RBP19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 VGLL2Q8N8G2 317 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 BICC1Q9H694 974 aaKnown RBP19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 C11orf49Q9H6J7 331 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 HMX1Q9NP08 348 aaPredicted RBP19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 FAM198AQ9UFP1 575 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 PNMA3Q9UL41 463 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 CACNA1FO60840 1977 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 AK9Q5TCS8 1911 aa19.31■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 RPTORQ8N122 1335 aa19.3■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 TRIM75PA6NK02 468 aa19.3■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 NBPF7P0C2Y1 421 aaPredicted RBP19.3■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.3■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 ZSCAN29Q8IWY8 852 aaPredicted RBP19.3■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 KAZALD1Q96I82 304 aa19.3■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 SPINK5Q9NQ38 1064 aaPredicted RBP19.3■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 PHF20L1A8MW92 1017 aa19.29■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 SLC5A1P13866 664 aa19.29■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 FAM110CQ1W6H9 321 aa19.29■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 AGTPBP1Q9UPW5 1226 aa19.29■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 PRDX5P30044 214 aa19.28■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 ZFPM1Q8IX07 1006 aa19.28■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 CTNND1O60716 968 aaKnown RBP19.27■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 RABL6Q3YEC7 729 aaPredicted RBP19.27■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 KLHDC4Q8TBB5 520 aa19.27■□□□□ 0.68
NEDD8-MDP1-204ENST00000605847 ALPK3Q96L96 1907 aa19.27■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 ENTPD3O75355 529 aa19.26■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 FGFR2P21802 821 aa19.26■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 RGS3P49796 1198 aa19.26■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 LPIN2Q92539 896 aa19.26■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 GNL3LQ9NVN8 582 aaKnown RBP19.26■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 ATRNL1Q5VV63 1379 aa19.25■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 GCLCP48506 637 aaPredicted RBP19.25■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 UTYO14607 1347 aa19.25■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 PABPC4Q13310 644 aaKnown RBP eCLIP19.24■□□□□ 0.675e-9■■■■□ 19.8
NEDD8-MDP1-204ENST00000605847 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 TREML2Q5T2D2 321 aa19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 WDR63Q8IWG1 891 aa19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 ANKRD44Q8N8A2 993 aa19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 PROCA1Q8NCQ7 364 aaPredicted RBP19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 IDI2Q9BXS1 227 aa19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 OGDHLQ9ULD0 1010 aa19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 SALL2Q9Y467 1007 aaPredicted RBP19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 UNC80Q8N2C7 3258 aa19.24■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 TRIM32Q13049 653 aa19.23■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 MAP3K10Q02779 954 aa19.22■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 PICALMQ13492 652 aa19.22■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 CCDC84Q86UT8 332 aaPredicted RBP19.22■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.22■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 DOCK2Q92608 1830 aa19.22■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 CUL9Q8IWT3 2517 aa19.22■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 DDX60LQ5H9U9 1706 aaKnown RBP19.22■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 DDTLA6NHG4 134 aaPredicted RBP19.21■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 MDM2Q00987 491 aaPredicted RBP19.21■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 SLF2Q8IX21 1173 aa19.21■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 ZGPATQ8N5A5 531 aaKnown RBP19.21■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 GJD2Q9UKL4 321 aa19.21■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 DENND2AQ9ULE3 1009 aa19.21■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 PFASO15067 1338 aa19.21■□□□□ 0.67
NEDD8-MDP1-204ENST00000605847 MYH13Q9UKX3 1938 aa19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 EYA2O00167 538 aa19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 PRKAR2AP13861 404 aaKnown RBP19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 CYP2B6P20813 491 aa19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 FAM109BQ6ICB4 259 aaPredicted RBP19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 SH3BP5LQ7L8J4 393 aa19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 DZIP1Q86YF9 867 aaKnown RBP19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 TRIB2Q92519 343 aa19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 FAM161BQ96MY7 647 aa19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 SALL1Q9NSC2 1324 aa19.2■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 POTEB2H3BUK9 544 aa19.19■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 SLURP2P0DP57 97 aa19.19■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 SPP2Q13103 211 aa19.19■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 GUCD1Q96NT3 240 aa19.19■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 LBHD1Q9BQE6 289 aaPredicted RBP19.19■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.19■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 DOCK1Q14185 1865 aa19.19■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 SEMA3EO15041 775 aa19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 HMGCS2P54868 508 aa19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 ZNF697Q5TEC3 545 aa19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 ZNF280CQ8ND82 737 aa19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 NUDT12Q9BQG2 462 aa19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 TBC1D2Q9BYX2 928 aa19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 OSBPL5Q9H0X9 879 aaPredicted RBP19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 ASCC2Q9H1I8 757 aaPredicted RBP19.18■□□□□ 0.66
NEDD8-MDP1-204ENST00000605847 ATP2B3Q16720 1220 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms