RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 GADL1Q6ZQY3 521 aa14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 FASTKD5Q7L8L6 764 aaKnown RBP14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 PRRT2Q7Z6L0 340 aaPredicted RBP14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 VGLL2Q8N8G2 317 aa14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 SMCR8Q8TEV9 937 aaPredicted RBP14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 SRCIN1Q9C0H9 1055 aa14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 PICK1Q9NRD5 415 aa14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 STXBP5LQ9Y2K9 1186 aa14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 ZHX2Q9Y6X8 837 aa14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 UNC80Q8N2C7 3258 aa14.82□□□□□ -0.04
PDLIM1P1-201ENST00000604187 NBPF7P0C2Y1 421 aaPredicted RBP14.81□□□□□ -0.04
PDLIM1P1-201ENST00000604187 EXOSC9Q06265 439 aaKnown RBP14.81□□□□□ -0.04
PDLIM1P1-201ENST00000604187 SCYL3Q8IZE3 742 aa14.81□□□□□ -0.04
PDLIM1P1-201ENST00000604187 BICC1Q9H694 974 aaKnown RBP14.81□□□□□ -0.04
PDLIM1P1-201ENST00000604187 FAM198AQ9UFP1 575 aa14.81□□□□□ -0.04
PDLIM1P1-201ENST00000604187 IFIT1P09914 478 aaKnown RBP14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 SYN1P17600 705 aa14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 PTPRAP18433 802 aa14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 PUM3Q15397 648 aaKnown RBP14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 LRIT3Q3SXY7 679 aa14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 ZFPM1Q8IX07 1006 aa14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 SLC45A1Q9Y2W3 748 aa14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 ATRNL1Q5VV63 1379 aa14.8□□□□□ -0.04
PDLIM1P1-201ENST00000604187 TRIM75PA6NK02 468 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 PHF20L1A8MW92 1017 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 ZEB1P37275 1124 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 MAGEA10P43363 369 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 RABL6Q3YEC7 729 aaPredicted RBP14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 ANKRD13CQ8N6S4 541 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 ANKRD44Q8N8A2 993 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 KLHDC4Q8TBB5 520 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 WDR66Q8TBY9 1149 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 COA7Q96BR5 231 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 KIF16BQ96L93 1317 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 USP40Q9NVE5 1235 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 MTMR10Q9NXD2 777 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 AFG3L2Q9Y4W6 797 aa14.79□□□□□ -0.04
PDLIM1P1-201ENST00000604187 PRDX5P30044 214 aa14.78□□□□□ -0.04
PDLIM1P1-201ENST00000604187 TDHQ8IZJ6 230 aa14.78□□□□□ -0.04
PDLIM1P1-201ENST00000604187 ANKLE1Q8NAG6 615 aa14.78□□□□□ -0.04
PDLIM1P1-201ENST00000604187 COL25A1Q9BXS0 654 aaPredicted RBP14.78□□□□□ -0.04
PDLIM1P1-201ENST00000604187 NBPF3Q9H094 633 aa14.78□□□□□ -0.04
PDLIM1P1-201ENST00000604187 HMGCRP04035 888 aa14.77□□□□□ -0.05
PDLIM1P1-201ENST00000604187 FGFR2P21802 821 aa14.77□□□□□ -0.05
PDLIM1P1-201ENST00000604187 UBE2OQ9C0C9 1292 aaKnown RBP14.77□□□□□ -0.05
PDLIM1P1-201ENST00000604187 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.05
PDLIM1P1-201ENST00000604187 LRRFIP2Q9Y608 721 aaKnown RBP14.77□□□□□ -0.05
PDLIM1P1-201ENST00000604187 UTYO14607 1347 aa14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 SLC5A1P13866 664 aa14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 RGS3P49796 1198 aa14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 FAM110CQ1W6H9 321 aa14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 CCDC84Q86UT8 332 aaPredicted RBP14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 ZSCAN29Q8IWY8 852 aaPredicted RBP14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 C11orf49Q9H6J7 331 aa14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.76□□□□□ -0.05
PDLIM1P1-201ENST00000604187 LDHBP07195 334 aaKnown RBP14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 SLURP2P0DP57 97 aa14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 TRIM32Q13049 653 aa14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 CCDC184Q52MB2 194 aa14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 TREML2Q5T2D2 321 aa14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 SH3BP5LQ7L8J4 393 aa14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 PNMA3Q9UL41 463 aa14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 SALL2Q9Y467 1007 aaPredicted RBP14.75□□□□□ -0.05
PDLIM1P1-201ENST00000604187 VCANP13611 3396 aa14.74□□□□□ -0.05
PDLIM1P1-201ENST00000604187 ENTPD3O75355 529 aa14.74□□□□□ -0.05
PDLIM1P1-201ENST00000604187 WDR63Q8IWG1 891 aa14.74□□□□□ -0.05
PDLIM1P1-201ENST00000604187 LPIN2Q92539 896 aa14.74□□□□□ -0.05
PDLIM1P1-201ENST00000604187 HMX1Q9NP08 348 aaPredicted RBP14.74□□□□□ -0.05
PDLIM1P1-201ENST00000604187 SPTBN5Q9NRC6 3674 aaKnown RBP14.73□□□□□ -0.05
PDLIM1P1-201ENST00000604187 RFX7Q2KHR2 1363 aa14.73□□□□□ -0.05
PDLIM1P1-201ENST00000604187 TTC28Q96AY4 2481 aa14.73□□□□□ -0.05
PDLIM1P1-201ENST00000604187 RPTORQ8N122 1335 aa14.73□□□□□ -0.05
PDLIM1P1-201ENST00000604187 CTNND1O60716 968 aaKnown RBP14.73□□□□□ -0.05
PDLIM1P1-201ENST00000604187 IDI2Q9BXS1 227 aa14.73□□□□□ -0.05
PDLIM1P1-201ENST00000604187 PFASO15067 1338 aa14.72□□□□□ -0.05
PDLIM1P1-201ENST00000604187 DDTLA6NHG4 134 aaPredicted RBP14.72□□□□□ -0.05
PDLIM1P1-201ENST00000604187 EYA2O00167 538 aa14.72□□□□□ -0.05
PDLIM1P1-201ENST00000604187 PICALMQ13492 652 aa14.72□□□□□ -0.05
PDLIM1P1-201ENST00000604187 TRIB2Q92519 343 aa14.72□□□□□ -0.05
PDLIM1P1-201ENST00000604187 OGDHLQ9ULD0 1010 aa14.72□□□□□ -0.05
PDLIM1P1-201ENST00000604187 PRKAR2AP13861 404 aaKnown RBP14.71□□□□□ -0.05
PDLIM1P1-201ENST00000604187 GCLCP48506 637 aaPredicted RBP14.71□□□□□ -0.05
PDLIM1P1-201ENST00000604187 MAP3K10Q02779 954 aa14.71□□□□□ -0.05
PDLIM1P1-201ENST00000604187 GUCD1Q96NT3 240 aa14.71□□□□□ -0.05
PDLIM1P1-201ENST00000604187 DDX4Q9NQI0 724 aaKnown RBP14.71□□□□□ -0.05
PDLIM1P1-201ENST00000604187 GNL3LQ9NVN8 582 aaKnown RBP14.71□□□□□ -0.05
PDLIM1P1-201ENST00000604187 GJD2Q9UKL4 321 aa14.71□□□□□ -0.05
PDLIM1P1-201ENST00000604187 GAKO14976 1311 aa14.7□□□□□ -0.06
PDLIM1P1-201ENST00000604187 SALL1Q9NSC2 1324 aa14.7□□□□□ -0.06
PDLIM1P1-201ENST00000604187 ATP2B3Q16720 1220 aa14.7□□□□□ -0.06
PDLIM1P1-201ENST00000604187 PROCA1Q8NCQ7 364 aaPredicted RBP14.7□□□□□ -0.06
PDLIM1P1-201ENST00000604187 FAM196BA6NMK8 535 aa14.69□□□□□ -0.06
PDLIM1P1-201ENST00000604187 RFX5P48382 616 aaPredicted RBP14.69□□□□□ -0.06
PDLIM1P1-201ENST00000604187 HMGCS2P54868 508 aa14.69□□□□□ -0.06
PDLIM1P1-201ENST00000604187 MDM2Q00987 491 aaPredicted RBP14.69□□□□□ -0.06
PDLIM1P1-201ENST00000604187 SPP2Q13103 211 aa14.69□□□□□ -0.06
PDLIM1P1-201ENST00000604187 DZIP1Q86YF9 867 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms