RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 HSPA6P17066 643 aa11.4□□□□□ -0.58
SQSTM1P1-201ENST00000603451 RGS3P49796 1198 aa11.4□□□□□ -0.58
SQSTM1P1-201ENST00000603451 MAP3K11Q16584 847 aa11.4□□□□□ -0.58
SQSTM1P1-201ENST00000603451 SH3RF3Q8TEJ3 882 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1P1-201ENST00000603451 OSBPL5Q9H0X9 879 aaPredicted RBP11.4□□□□□ -0.58
SQSTM1P1-201ENST00000603451 FAM198AQ9UFP1 575 aa11.4□□□□□ -0.58
SQSTM1P1-201ENST00000603451 ZMYM6O95789 1325 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MBD4O95243 580 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CELF2O95319 508 aaKnown RBP11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 NFIAQ12857 509 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 C2orf69Q8N8R5 385 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MIGA1Q8NAN2 632 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 RILPL2Q969X0 211 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TMEM39BQ9GZU3 492 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 EHD4Q9H223 541 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 GBA2Q9HCG7 927 aaPredicted RBP11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 DIAPH3Q9NSV4 1193 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 HERC5Q9UII4 1024 aaKnown RBP11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 LAMA4Q16363 1823 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MYH8P13535 1937 aa11.39□□□□□ -0.59
SQSTM1P1-201ENST00000603451 DOCK1Q14185 1865 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TRAF5O00463 557 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 GPAA1O43292 621 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TBC1D12O60347 775 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 HLA-DOAP06340 250 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 SDSP20132 328 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 USP5P45974 858 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CACNB3P54284 484 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ARMC9Q7Z3E5 817 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TTC6Q86TZ1 520 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 AMOTL1Q8IY63 956 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 LCORLQ8N3X6 602 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 RUFY2Q8WXA3 655 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 OSBP2Q969R2 916 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CSRNP1Q96S65 589 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 STRBPQ96SI9 672 aaKnown RBP11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 PUS7LQ9H0K6 701 aaKnown RBP11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 DDX4Q9NQI0 724 aaKnown RBP11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ARPP21Q9UBL0 812 aaPredicted RBP11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MKRN1Q9UHC7 482 aaKnown RBP11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TLL2Q9Y6L7 1015 aa11.38□□□□□ -0.59
SQSTM1P1-201ENST00000603451 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 IREB2P48200 963 aaKnown RBP11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 DYNLL1P63167 89 aaKnown RBP11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 PICALMQ13492 652 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MCMDC2Q4G0Z9 681 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CST9Q5W186 159 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 SAPCD2Q86UD0 394 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TGFBRAP1Q8WUH2 860 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 PI4KBQ9UBF8 816 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ATAD5Q96QE3 1844 aa11.37□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CCDC171Q6TFL3 1326 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 RASSF10A6NK89 507 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 NT5C2P49902 561 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TCP10Q12799 353 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 NBPF12Q5TAG4 269 aaPredicted RBP11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CASC1Q6TDU7 716 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 FOXP4Q8IVH2 680 aaPredicted RBP11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ZSCAN29Q8IWY8 852 aaPredicted RBP11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ZNF341Q9BYN7 854 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 DCP1AQ9NPI6 582 aaPredicted RBP11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 GINM1Q9NU53 330 aa11.36□□□□□ -0.59
SQSTM1P1-201ENST00000603451 PATL2C9JE40 543 aaKnown RBP11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 NMIQ13287 307 aaPredicted RBP11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 SBK1Q52WX2 424 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 LDLRAD1Q5T700 205 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MAPKAPK5Q8IW41 473 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ANKRD13AQ8IZ07 590 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 SWAP70Q9UH65 585 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ZNF112Q9UJU3 913 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 SLC4A4Q9Y6R1 1079 aa11.35□□□□□ -0.59
SQSTM1P1-201ENST00000603451 A0A0D9SFI3 127 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 DDTLA6NHG4 134 aaPredicted RBP11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 GSG1L2A8MUP6 293 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 M0R2C6 588 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CHMLP26374 656 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ECE1P42892 770 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 HUNKP57058 714 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ALX1Q15699 326 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 NOL9Q5SY16 702 aaKnown RBP11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 SH3BP5LQ7L8J4 393 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 FAM227BQ96M60 508 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TRIM34Q9BYJ4 488 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ZNF287Q9HBT7 754 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 MCM9Q9NXL9 1143 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 SERPINB13Q9UIV8 391 aa11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 ABT1Q9ULW3 272 aaKnown RBP11.34□□□□□ -0.59
SQSTM1P1-201ENST00000603451 CTNND1O60716 968 aaKnown RBP11.33□□□□□ -0.6
SQSTM1P1-201ENST00000603451 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
SQSTM1P1-201ENST00000603451 CDC45O75419 566 aa11.33□□□□□ -0.6
SQSTM1P1-201ENST00000603451 ZBTB48P10074 688 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms