RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 LAMB4A4D0S4 1761 aa8.78□□□□□ -1
HCG18-244ENST00000602516 CYP27B1O15528 508 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 ST18O60284 1047 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 AP1G2O75843 785 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 MYCLP1P12525 358 aaPredicted RBP8.77□□□□□ -1.01
HCG18-244ENST00000602516 PRPF4BQ13523 1007 aaKnown RBP8.77□□□□□ -1.01
HCG18-244ENST00000602516 LRP10Q7Z4F1 713 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 RILPL2Q969X0 211 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 KAZALD1Q96I82 304 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 USP25Q9UHP3 1055 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 LCMT1Q9UIC8 334 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 ROBO1Q9Y6N7 1651 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 TTC41PQ6P2S7 1318 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 HOXD10P28358 340 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 SLC39A6Q13433 755 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 CWF19L2Q2TBE0 894 aaKnown RBP8.77□□□□□ -1.01
HCG18-244ENST00000602516 OTUD6AQ7L8S5 288 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 GPT2Q8TD30 523 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 GBP4Q96PP9 640 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 C9orf78Q9NZ63 289 aaPredicted RBP8.77□□□□□ -1.01
HCG18-244ENST00000602516 SPATA7Q9P0W8 599 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 SWAP70Q9UH65 585 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 ZKSCAN5Q9Y2L8 839 aa8.77□□□□□ -1.01
HCG18-244ENST00000602516 GRM8O00222 908 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 CYP2E1P05181 493 aaPredicted RBP8.76□□□□□ -1.01
HCG18-244ENST00000602516 BRINP3Q76B58 766 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 MYOCDQ8IZQ8 938 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 TACO1Q9BSH4 297 aaKnown RBP8.76□□□□□ -1.01
HCG18-244ENST00000602516 HOXC10Q9NYD6 342 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 KRT38O76015 456 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 SASH1O94885 1247 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 IGKV5-2P06315 115 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 CHRNA2Q15822 529 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 CCDC73Q6ZRK6 1079 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 TRIM11Q96F44 468 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 ZNF496Q96IT1 587 aaPredicted RBP8.76□□□□□ -1.01
HCG18-244ENST00000602516 TMEM165Q9HC07 324 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 TRPV5Q9NQA5 729 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 ABCA3Q99758 1704 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 UBR2Q8IWV8 1755 aa8.76□□□□□ -1.01
HCG18-244ENST00000602516 PYGLP06737 847 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 TPP2P29144 1249 aaPredicted RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 HSPA1LP34931 641 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 PRIM1P49642 420 aaKnown RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 ZBED6P86452 979 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 NSUN2Q08J23 767 aaKnown RBP eCLIP8.75□□□□□ -1.01
HCG18-244ENST00000602516 COL19A1Q14993 1142 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 ACBD5Q5T8D3 534 aaPredicted RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 LARP1Q6PKG0 1096 aaKnown RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 TMEM110Q86TL2 294 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 GAS2L3Q86XJ1 694 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 RBM46Q8TBY0 533 aaKnown RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 BHMTQ93088 406 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 NEUROD6Q96NK8 337 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 TRIM7Q9C029 511 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 BMP2KQ9NSY1 1161 aaPredicted RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 SNRPA1P09661 255 aaKnown RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 GJA8P48165 433 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 MCM2P49736 904 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 SESN3P58005 492 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 ICA1Q05084 483 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 ERC1Q8IUD2 1116 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 SUCLG2Q96I99 432 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 IL25Q9H293 177 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 SOS2Q07890 1332 aaPredicted RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 MYO1BO43795 1136 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 SNUPNO95149 360 aaKnown RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 NUCB2P80303 420 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 LEKR1Q6ZMV7 388 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 METTL22Q9BUU2 404 aaPredicted RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 FAM53CQ9NYF3 392 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 PPP1R1BQ9UD71 204 aaPredicted RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 MKRN1Q9UHC7 482 aaKnown RBP8.75□□□□□ -1.01
HCG18-244ENST00000602516 PALD1Q9ULE6 856 aa8.75□□□□□ -1.01
HCG18-244ENST00000602516 COL15A1P39059 1388 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 NEURL1BA8MQ27 555 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 SGSM2O43147 1006 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 BBOX1O75936 387 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 GLRX3O76003 335 aaKnown RBP8.74□□□□□ -1.01
HCG18-244ENST00000602516 CYP11B2P19099 503 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 HSPA4P34932 840 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 PDE6BP35913 854 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 FILIP1LQ4L180 1135 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 CNTROBQ8N137 903 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 ANO2Q9NQ90 1003 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 USP16Q9Y5T5 823 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 PAPPAQ13219 1627 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 LRRC10BA6NIK2 292 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 SMC2O95347 1197 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 MYL1P05976 194 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 AIMP1Q12904 312 aaKnown RBP8.74□□□□□ -1.01
HCG18-244ENST00000602516 GCKRQ14397 625 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 SKOR2Q2VWA4 1001 aaPredicted RBP8.74□□□□□ -1.01
HCG18-244ENST00000602516 COPS6Q7L5N1 327 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 CCDC186Q7Z3E2 898 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
HCG18-244ENST00000602516 XAGE3Q8WTP9 111 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms