RNA–Protein interactions for RNA: ENST00000601762.5

FARP1-236, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-236ENST00000601762 GRIN3AQ8TCU5 1115 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 KIFC2Q96AC6 838 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 AVENQ9NQS1 362 aaPredicted RBP4.34□□□□□ -1.71
FARP1-236ENST00000601762 CACNA2D2Q9NY47 1150 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 FRRS1LQ9P0K9 344 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 GMIPQ9P107 970 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 CHPF2Q9P2E5 772 aa4.34□□□□□ -1.71
FARP1-236ENST00000601762 GMPR2Q9P2T1 348 aaKnown RBP4.34□□□□□ -1.71
FARP1-236ENST00000601762 POLR3KQ9Y2Y1 108 aaPredicted RBP4.34□□□□□ -1.71
FARP1-236ENST00000601762 DIAPH1O60610 1272 aaKnown RBP4.33□□□□□ -1.72
FARP1-236ENST00000601762 HTR3BO95264 441 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 ASMTLO95671 621 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 CYP11A1P05108 521 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 HCLS1P14317 486 aaPredicted RBP4.33□□□□□ -1.72
FARP1-236ENST00000601762 CDC27P30260 824 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 PDE4BQ07343 736 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 TBC1D8BQ0IIM8 1120 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 TKFCQ3LXA3 575 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 DALRD3Q5D0E6 543 aaKnown RBP4.33□□□□□ -1.72
FARP1-236ENST00000601762 MAP1SQ66K74 1059 aaPredicted RBP4.33□□□□□ -1.72
FARP1-236ENST00000601762 KANK3Q6NY19 840 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 SPATC1Q76KD6 591 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 HDXQ7Z353 690 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 PDZD3Q86UT5 571 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 CCDC155Q8N6L0 562 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 STK35Q8TDR2 534 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 TTC9Q92623 222 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 TNFRSF25Q93038 417 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 GTPBP3Q969Y2 492 aaKnown RBP4.33□□□□□ -1.72
FARP1-236ENST00000601762 ZNF837Q96EG3 531 aaPredicted RBP4.33□□□□□ -1.72
FARP1-236ENST00000601762 TRIM47Q96LD4 638 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 SPATA9Q9BWV2 254 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 KRT82Q9NSB4 513 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 PFDN2Q9UHV9 154 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 HCN2Q9UL51 889 aa4.33□□□□□ -1.72
FARP1-236ENST00000601762 C11orf95C9JLR9 678 aaPredicted RBP4.32□□□□□ -1.72
FARP1-236ENST00000601762 H3BRJ5 948 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 AGRPO00253 132 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 GFRA2O00451 464 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 GRIN3BO60391 1043 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 NAT2P11245 290 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 CPB1P15086 417 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 ITGA6P23229 1130 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 ARL4DP49703 201 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 PTPN11Q06124 597 aaPredicted RBP4.32□□□□□ -1.72
FARP1-236ENST00000601762 HP1BP3Q5SSJ5 553 aaPredicted RBP4.32□□□□□ -1.72
FARP1-236ENST00000601762 FAM117BQ6P1L5 589 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 VHLLQ6RSH7 139 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 ADAMTSL4Q6UY14 1074 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 RUFY4Q6ZNE9 571 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 FERMT3Q86UX7 667 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 ZBTB38Q8NAP3 1195 aaPredicted RBP4.32□□□□□ -1.72
FARP1-236ENST00000601762 CHAC2Q8WUX2 184 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 STAG1Q8WVM7 1258 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 WNT8BQ93098 351 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 MFSD3Q96ES6 412 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 ACSBG1Q96GR2 724 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 SGSM3Q96HU1 749 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 CCDC136Q96JN2 1154 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 SMG9Q9H0W8 520 aaKnown RBP4.32□□□□□ -1.72
FARP1-236ENST00000601762 HOMER2Q9NSB8 354 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 PCDHA4Q9UN74 947 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 SLC6A14Q9UN76 642 aa4.32□□□□□ -1.72
FARP1-236ENST00000601762 ADARB2-AS1A8MUL3 147 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 LCE2BO14633 110 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 TNFRSF10CO14798 259 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 RFPL3O75679 317 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 SNRPBP14678 240 aaKnown RBP4.31□□□□□ -1.72
FARP1-236ENST00000601762 CNGA1P29973 690 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 CCNFP41002 786 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 ZNF143P52747 638 aaPredicted RBP4.31□□□□□ -1.72
FARP1-236ENST00000601762 CTBSQ01459 385 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 BBS9Q3SYG4 887 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 WIPI1Q5MNZ9 446 aaPredicted RBP4.31□□□□□ -1.72
FARP1-236ENST00000601762 PERM1Q5SV97 790 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 CDCP2Q5VXM1 449 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 UNC5AQ6ZN44 842 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 NLRC3Q7RTR2 1065 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 NIM1KQ8IY84 436 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 NINJ1Q92982 152 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 CORO1BQ9BR76 489 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 LACRTQ9GZZ8 138 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 CAAP1Q9H8G2 361 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 GEMIN8Q9NWZ8 242 aaKnown RBP4.31□□□□□ -1.72
FARP1-236ENST00000601762 MAGEC2Q9UBF1 373 aaPredicted RBP4.31□□□□□ -1.72
FARP1-236ENST00000601762 REV1Q9UBZ9 1251 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 ADAM30Q9UKF2 790 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 FAN1Q9Y2M0 1017 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 ATP8A1Q9Y2Q0 1164 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 CD2APQ9Y5K6 639 aa4.31□□□□□ -1.72
FARP1-236ENST00000601762 UPK3BL1B0FP48 263 aa4.3□□□□□ -1.72
FARP1-236ENST00000601762 B2RBV5 119 aa4.3□□□□□ -1.72
FARP1-236ENST00000601762 ALG1L2C9J202 215 aa4.3□□□□□ -1.72
FARP1-236ENST00000601762 UPK3BL2E5RIL1 263 aa4.3□□□□□ -1.72
FARP1-236ENST00000601762 SOX1O00570 391 aaPredicted RBP4.3□□□□□ -1.72
FARP1-236ENST00000601762 SUSD5O60279 629 aa4.3□□□□□ -1.72
FARP1-236ENST00000601762 BMP4P12644 408 aa4.3□□□□□ -1.72
FARP1-236ENST00000601762 NME1P15531 152 aaKnown RBP4.3□□□□□ -1.72
FARP1-236ENST00000601762 PLCG1P19174 1290 aa4.3□□□□□ -1.72
FARP1-236ENST00000601762 ADH6P28332 368 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms