RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 PXYLP1Q8TE99 480 aa20.16■□□□□ 0.82
SSBP4-211ENST00000601614 PAWRQ96IZ0 340 aaKnown RBP20.16■□□□□ 0.82
SSBP4-211ENST00000601614 GDF15Q99988 308 aa20.16■□□□□ 0.82
SSBP4-211ENST00000601614 IRF5Q13568 498 aa20.15■□□□□ 0.82
SSBP4-211ENST00000601614 ZHX2Q9Y6X8 837 aa20.15■□□□□ 0.82
SSBP4-211ENST00000601614 KIF16BQ96L93 1317 aa20.15■□□□□ 0.82
SSBP4-211ENST00000601614 DDX60LQ5H9U9 1706 aaKnown RBP20.14■□□□□ 0.81
SSBP4-211ENST00000601614 WDR63Q8IWG1 891 aa20.14■□□□□ 0.81
SSBP4-211ENST00000601614 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.81
SSBP4-211ENST00000601614 AFG3L2Q9Y4W6 797 aa20.14■□□□□ 0.81
SSBP4-211ENST00000601614 TNPO2O14787 897 aaKnown RBP20.13■□□□□ 0.81
SSBP4-211ENST00000601614 PTPRAP18433 802 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 MNX1P50219 401 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-211ENST00000601614 PUM3Q15397 648 aaKnown RBP20.13■□□□□ 0.81
SSBP4-211ENST00000601614 GADL1Q6ZQY3 521 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 Q7L0L9 218 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 SH3BP5LQ7L8J4 393 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 SCYL3Q8IZE3 742 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 WDR66Q8TBY9 1149 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 USP40Q9NVE5 1235 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 PLXNB2O15031 1838 aa20.13■□□□□ 0.81
SSBP4-211ENST00000601614 IFIT1P09914 478 aaKnown RBP20.12■□□□□ 0.81
SSBP4-211ENST00000601614 FASTKD5Q7L8L6 764 aaKnown RBP20.12■□□□□ 0.81
SSBP4-211ENST00000601614 CCDC84Q86UT8 332 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-211ENST00000601614 TAOK2Q9UL54 1235 aa20.12■□□□□ 0.81
SSBP4-211ENST00000601614 ZMYND8Q9ULU4 1186 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-211ENST00000601614 RFX7Q2KHR2 1363 aa20.11■□□□□ 0.81
SSBP4-211ENST00000601614 BMP8BP34820 402 aa20.11■□□□□ 0.81
SSBP4-211ENST00000601614 C7orf61Q8IZ16 206 aa20.11■□□□□ 0.81
SSBP4-211ENST00000601614 SLC45A1Q9Y2W3 748 aa20.11■□□□□ 0.81
SSBP4-211ENST00000601614 LOC285556D6RIA3 1793 aa20.11■□□□□ 0.81
SSBP4-211ENST00000601614 RFX5P48382 616 aaPredicted RBP20.1■□□□□ 0.81
SSBP4-211ENST00000601614 RGS3P49796 1198 aa20.1■□□□□ 0.81
SSBP4-211ENST00000601614 NECAB2Q7Z6G3 386 aa20.1■□□□□ 0.81
SSBP4-211ENST00000601614 DEFB123Q8N688 67 aa20.1■□□□□ 0.81
SSBP4-211ENST00000601614 ANKRD13CQ8N6S4 541 aa20.1■□□□□ 0.81
SSBP4-211ENST00000601614 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.1■□□□□ 0.815e-6■■■□□ 19.2
SSBP4-211ENST00000601614 ATAD5Q96QE3 1844 aa20.1■□□□□ 0.81
SSBP4-211ENST00000601614 SMCR8Q8TEV9 937 aaPredicted RBP20.09■□□□□ 0.81
SSBP4-211ENST00000601614 LPIN2Q92539 896 aa20.09■□□□□ 0.81
SSBP4-211ENST00000601614 PICK1Q9NRD5 415 aa20.09■□□□□ 0.81
SSBP4-211ENST00000601614 DDTLA6NHG4 134 aaPredicted RBP20.08■□□□□ 0.81
SSBP4-211ENST00000601614 TRIM75PA6NK02 468 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 SLC5A1P13866 664 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 SYN1P17600 705 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 CAPN2P17655 700 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 ZEB1P37275 1124 aaPredicted RBP20.08■□□□□ 0.81
SSBP4-211ENST00000601614 MAP3K10Q02779 954 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 TRIM32Q13049 653 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 TREML2Q5T2D2 321 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 GPR153Q6NV75 609 aa20.08■□□□□ 0.81
SSBP4-211ENST00000601614 EYA2O00167 538 aa20.07■□□□□ 0.8
SSBP4-211ENST00000601614 LDHBP07195 334 aaKnown RBP20.07■□□□□ 0.8
SSBP4-211ENST00000601614 ATG9AQ7Z3C6 839 aa20.07■□□□□ 0.8
SSBP4-211ENST00000601614 IDI2Q9BXS1 227 aa20.07■□□□□ 0.8
SSBP4-211ENST00000601614 DDX4Q9NQI0 724 aaKnown RBP20.07■□□□□ 0.8
SSBP4-211ENST00000601614 AGTPBP1Q9UPW5 1226 aa20.07■□□□□ 0.8
SSBP4-211ENST00000601614 ENTPD3O75355 529 aa20.06■□□□□ 0.8
SSBP4-211ENST00000601614 COA7Q96BR5 231 aa20.06■□□□□ 0.8
SSBP4-211ENST00000601614 USP44Q9H0E7 712 aa20.06■□□□□ 0.8
SSBP4-211ENST00000601614 MTMR10Q9NXD2 777 aa20.06■□□□□ 0.8
SSBP4-211ENST00000601614 STXBP5LQ9Y2K9 1186 aa20.06■□□□□ 0.8
SSBP4-211ENST00000601614 GAKO14976 1311 aa20.05■□□□□ 0.8
SSBP4-211ENST00000601614 SALL1Q9NSC2 1324 aa20.05■□□□□ 0.8
SSBP4-211ENST00000601614 UNC80Q8N2C7 3258 aa20.05■□□□□ 0.8
SSBP4-211ENST00000601614 MAGEA10P43363 369 aaPredicted RBP20.05■□□□□ 0.8
SSBP4-211ENST00000601614 FAM110CQ1W6H9 321 aa20.05■□□□□ 0.8
SSBP4-211ENST00000601614 LRIT3Q3SXY7 679 aa20.05■□□□□ 0.8
SSBP4-211ENST00000601614 ANKLE1Q8NAG6 615 aa20.05■□□□□ 0.8
SSBP4-211ENST00000601614 CTNND1O60716 968 aaKnown RBP20.04■□□□□ 0.8
SSBP4-211ENST00000601614 HMGCRP04035 888 aa20.04■□□□□ 0.8
SSBP4-211ENST00000601614 PHKA1P46020 1223 aa20.04■□□□□ 0.8
SSBP4-211ENST00000601614 ZSCAN29Q8IWY8 852 aaPredicted RBP20.04■□□□□ 0.8
SSBP4-211ENST00000601614 GJD2Q9UKL4 321 aa20.04■□□□□ 0.8
SSBP4-211ENST00000601614 LRRFIP2Q9Y608 721 aaKnown RBP20.04■□□□□ 0.8
SSBP4-211ENST00000601614 TDHQ8IZJ6 230 aa20.03■□□□□ 0.8
SSBP4-211ENST00000601614 RPTORQ8N122 1335 aa20.02■□□□□ 0.8
SSBP4-211ENST00000601614 FAM196BA6NMK8 535 aa20.02■□□□□ 0.8
SSBP4-211ENST00000601614 MRPL50Q8N5N7 158 aaKnown RBP20.02■□□□□ 0.8
SSBP4-211ENST00000601614 COL25A1Q9BXS0 654 aaPredicted RBP20.02■□□□□ 0.8
SSBP4-211ENST00000601614 NBPF3Q9H094 633 aa20.02■□□□□ 0.8
SSBP4-211ENST00000601614 PFASO15067 1338 aa20.02■□□□□ 0.79
SSBP4-211ENST00000601614 PICALMQ13492 652 aa20.01■□□□□ 0.79
SSBP4-211ENST00000601614 ATP2B3Q16720 1220 aa20.01■□□□□ 0.79
SSBP4-211ENST00000601614 TRIB2Q92519 343 aa20.01■□□□□ 0.79
SSBP4-211ENST00000601614 SIL1Q9H173 461 aa20.01■□□□□ 0.79
SSBP4-211ENST00000601614 C11orf49Q9H6J7 331 aa20.01■□□□□ 0.79
SSBP4-211ENST00000601614 FRMPD3Q5JV73 1810 aa20■□□□□ 0.79
SSBP4-211ENST00000601614 PROCA1Q8NCQ7 364 aaPredicted RBP20■□□□□ 0.79
SSBP4-211ENST00000601614 MRS2Q9HD23 443 aa20■□□□□ 0.79
SSBP4-211ENST00000601614 HMX1Q9NP08 348 aaPredicted RBP20■□□□□ 0.79
SSBP4-211ENST00000601614 OGDHLQ9ULD0 1010 aa20■□□□□ 0.79
SSBP4-211ENST00000601614 DENND2AQ9ULE3 1009 aa20■□□□□ 0.79
SSBP4-211ENST00000601614 SIPA1L1O43166 1804 aa19.99■□□□□ 0.79
SSBP4-211ENST00000601614 ADORA1P30542 326 aa19.99■□□□□ 0.79
SSBP4-211ENST00000601614 SPP2Q13103 211 aa19.99■□□□□ 0.79
SSBP4-211ENST00000601614 RRP1BQ14684 758 aaKnown RBP19.99■□□□□ 0.79
SSBP4-211ENST00000601614 PNMA3Q9UL41 463 aa19.99■□□□□ 0.79
SSBP4-211ENST00000601614 PEX10O60683 326 aa19.98■□□□□ 0.79
SSBP4-211ENST00000601614 BTDP43251 543 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms