RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 RASSF4Q9H2L5 321 aa10.63□□□□□ -0.71
LINC00343-209ENST00000601607 BIN2Q9UBW5 565 aaPredicted RBP10.63□□□□□ -0.71
LINC00343-209ENST00000601607 TRIM33Q9UPN9 1127 aa10.63□□□□□ -0.71
LINC00343-209ENST00000601607 ROBO2Q9HCK4 1378 aa10.63□□□□□ -0.71
LINC00343-209ENST00000601607 UTRNP46939 3433 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 PXDNQ92626 1479 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 VPS72Q15906 364 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 CEP135Q66GS9 1140 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 PMEPA1Q969W9 287 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 NACC1Q96RE7 527 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 SEMA6BQ9H3T3 888 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 SALL4Q9UJQ4 1053 aa10.62□□□□□ -0.71
LINC00343-209ENST00000601607 CCDC9Q9Y3X0 531 aaKnown RBP10.62□□□□□ -0.71
LINC00343-209ENST00000601607 SPHKAPQ2M3C7 1700 aa10.61□□□□□ -0.71
LINC00343-209ENST00000601607 VPS8Q8N3P4 1428 aa10.61□□□□□ -0.71
LINC00343-209ENST00000601607 SMNDC1O75940 238 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC00343-209ENST00000601607 KCNA1Q09470 495 aa10.61□□□□□ -0.71
LINC00343-209ENST00000601607 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
LINC00343-209ENST00000601607 IL22RA1Q8N6P7 574 aa10.61□□□□□ -0.71
LINC00343-209ENST00000601607 IVNS1ABPQ9Y6Y0 642 aa10.61□□□□□ -0.71
LINC00343-209ENST00000601607 ADGRL2O95490 1459 aa10.61□□□□□ -0.71
LINC00343-209ENST00000601607 EREGO14944 169 aa10.6□□□□□ -0.71
LINC00343-209ENST00000601607 GRIK4Q16099 956 aa10.6□□□□□ -0.71
LINC00343-209ENST00000601607 PBX4Q9BYU1 374 aa10.6□□□□□ -0.71
LINC00343-209ENST00000601607 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.6□□□□□ -0.71
LINC00343-209ENST00000601607 BRWD3Q6RI45 1802 aa10.6□□□□□ -0.71
LINC00343-209ENST00000601607 ACPPP15309 386 aa10.59□□□□□ -0.71
LINC00343-209ENST00000601607 FMR1NBQ8N0W7 255 aaPredicted RBP10.59□□□□□ -0.71
LINC00343-209ENST00000601607 TMC1Q8TDI8 760 aa10.59□□□□□ -0.71
LINC00343-209ENST00000601607 LACRTQ9GZZ8 138 aa10.59□□□□□ -0.71
LINC00343-209ENST00000601607 ELNP15502 786 aa10.58□□□□□ -0.72
LINC00343-209ENST00000601607 PDE3BQ13370 1112 aa10.58□□□□□ -0.72
LINC00343-209ENST00000601607 EZH2Q15910 746 aaKnown RBP10.58□□□□□ -0.72
LINC00343-209ENST00000601607 DTWD1Q8N5C7 304 aa10.57□□□□□ -0.72
LINC00343-209ENST00000601607 CITED4Q96RK1 184 aa10.57□□□□□ -0.72
LINC00343-209ENST00000601607 ZFYVE28Q9HCC9 887 aa10.57□□□□□ -0.72
LINC00343-209ENST00000601607 E9PCH4 1651 aa10.57□□□□□ -0.72
LINC00343-209ENST00000601607 TRPA1O75762 1119 aa10.56□□□□□ -0.72
LINC00343-209ENST00000601607 PDIA4P13667 645 aaKnown RBP10.56□□□□□ -0.72
LINC00343-209ENST00000601607 CACTIN-AS1Q8N1I8 211 aa10.56□□□□□ -0.72
LINC00343-209ENST00000601607 FAM129BQ96TA1 746 aa10.56□□□□□ -0.72
LINC00343-209ENST00000601607 DZANK1Q9NVP4 752 aa10.56□□□□□ -0.72
LINC00343-209ENST00000601607 DISP2A7MBM2 1401 aa10.56□□□□□ -0.72
LINC00343-209ENST00000601607 SPATA31A3Q5VYP0 1347 aa10.56□□□□□ -0.72
LINC00343-209ENST00000601607 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
LINC00343-209ENST00000601607 LRPPRCP42704 1394 aaKnown RBP10.55□□□□□ -0.72
LINC00343-209ENST00000601607 POLR3DP05423 398 aaPredicted RBP10.55□□□□□ -0.72
LINC00343-209ENST00000601607 EDN3P14138 238 aa10.55□□□□□ -0.72
LINC00343-209ENST00000601607 ITGB7P26010 798 aa10.55□□□□□ -0.72
LINC00343-209ENST00000601607 ADAMTSL4Q6UY14 1074 aa10.55□□□□□ -0.72
LINC00343-209ENST00000601607 FBXO11Q86XK2 927 aa10.55□□□□□ -0.72
LINC00343-209ENST00000601607 HHIPQ96QV1 700 aa10.55□□□□□ -0.72
LINC00343-209ENST00000601607 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
LINC00343-209ENST00000601607 CEP350Q5VT06 3117 aa10.55□□□□□ -0.72
LINC00343-209ENST00000601607 USP32Q8NFA0 1604 aa10.55□□□□□ -0.72
LINC00343-209ENST00000601607 HFM1A2PYH4 1435 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 DEAF1O75398 565 aaPredicted RBP10.54□□□□□ -0.72
LINC00343-209ENST00000601607 PTPRAP18433 802 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 CDC27P30260 824 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 RSPO4Q2I0M5 234 aaPredicted RBP10.54□□□□□ -0.72
LINC00343-209ENST00000601607 ZMYM1Q5SVZ6 1142 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 CAMKK2Q96RR4 588 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 OSMRQ99650 979 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 RBCK1Q9BYM8 510 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 LATS2Q9NRM7 1088 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 PPP1R1BQ9UD71 204 aaPredicted RBP10.54□□□□□ -0.72
LINC00343-209ENST00000601607 PPME1Q9Y570 386 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 IQGAP3Q86VI3 1631 aa10.54□□□□□ -0.72
LINC00343-209ENST00000601607 PRAG1Q86YV5 1406 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 NFKBIEO00221 500 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 PDE2AO00408 941 aaPredicted RBP10.53□□□□□ -0.72
LINC00343-209ENST00000601607 GPR182O15218 404 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 NEFLP07196 543 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 SELPP16109 830 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 CDC25BP30305 580 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 ORC1Q13415 861 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 ZKSCAN3Q9BRR0 538 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 MUC3BQ9H195 1237 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 SH2B1Q9NRF2 756 aaPredicted RBP10.53□□□□□ -0.72
LINC00343-209ENST00000601607 DCTN4Q9UJW0 460 aa10.53□□□□□ -0.72
LINC00343-209ENST00000601607 NUP155O75694 1391 aa10.52□□□□□ -0.72
LINC00343-209ENST00000601607 FAM177BA6PVY3 158 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 FAM50AQ14320 339 aaKnown RBP10.52□□□□□ -0.73
LINC00343-209ENST00000601607 NKAPLQ5M9Q1 402 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 USPL1Q5W0Q7 1092 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 TXNDC11Q6PKC3 985 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 NIF3L1Q9GZT8 377 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 TPSG1Q9NRR2 321 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 NEXMIFQ5QGS0 1516 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 CDC42BPGQ6DT37 1551 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
LINC00343-209ENST00000601607 FAM83GA6ND36 823 aa10.51□□□□□ -0.73
LINC00343-209ENST00000601607 C9orf172C9J069 976 aa10.51□□□□□ -0.73
LINC00343-209ENST00000601607 PATL2C9JE40 543 aaKnown RBP10.51□□□□□ -0.73
LINC00343-209ENST00000601607 LINC01387J3KSC0 135 aa10.51□□□□□ -0.73
LINC00343-209ENST00000601607 IGHA2P01877 340 aa10.51□□□□□ -0.73
LINC00343-209ENST00000601607 MAPK1P28482 360 aa10.51□□□□□ -0.73
LINC00343-209ENST00000601607 C1QTNF8P60827 252 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms