RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 GORASP1Q9BQQ3 440 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 NUP58Q9BVL2 599 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 SLMAPQ14BN4 828 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 IQCGQ9H095 443 aaKnown RBP11.12□□□□□ -0.63
NFKB1-212ENST00000600343 EBF2Q9HAK2 575 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 NOD2Q9HC29 1040 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 FANCLQ9NW38 375 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 GOLGA6L10A6NI86 522 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 OPA1O60313 960 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 LINGO3P0C6S8 592 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 PAX3P23760 479 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 SKOR1P84550 965 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 TWISTNBQ3B726 338 aaPredicted RBP11.12□□□□□ -0.63
NFKB1-212ENST00000600343 SELENOOQ9BVL4 669 aa11.12□□□□□ -0.63
NFKB1-212ENST00000600343 MTX1Q13505 466 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 SPECC1Q5M775 1068 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 RBM17Q96I25 401 aaKnown RBP11.11□□□□□ -0.63
NFKB1-212ENST00000600343 LZTS2Q9BRK4 669 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 MYO1AQ9UBC5 1043 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 U3KPZ7 1027 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-212ENST00000600343 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 GPATCH8Q9UKJ3 1502 aaKnown RBP11.11□□□□□ -0.63
NFKB1-212ENST00000600343 TMEM232C9JQI7 657 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 NCAPHQ15003 741 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 MTHFD1LQ6UB35 978 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 DDX54Q8TDD1 881 aaKnown RBP11.11□□□□□ -0.63
NFKB1-212ENST00000600343 CUL5Q93034 780 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
NFKB1-212ENST00000600343 EPN3Q9H201 632 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 TTC37Q6PGP7 1564 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 ATP6V1G2O95670 118 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 ATP1A2P50993 1020 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 CUL3Q13618 768 aa11.11□□□□□ -0.63
NFKB1-212ENST00000600343 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
NFKB1-212ENST00000600343 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 HECW2Q9P2P5 1572 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 B4DLN1 442 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 H3BQV1 296 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 GSPT2Q8IYD1 628 aaKnown RBP11.1□□□□□ -0.63
NFKB1-212ENST00000600343 MEIS3Q99687 375 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 TSPYL2Q9H2G4 693 aaPredicted RBP11.1□□□□□ -0.63
NFKB1-212ENST00000600343 LIN7AO14910 233 aaPredicted RBP11.1□□□□□ -0.63
NFKB1-212ENST00000600343 ATP6V1G1O75348 118 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 ANP32DO95626 131 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 USP14P54578 494 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 ADKP55263 362 aaKnown RBP11.1□□□□□ -0.63
NFKB1-212ENST00000600343 MSL1Q68DK7 614 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 KIAA1468Q9P260 1216 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 A0A1B0GVL5 298 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 MGRN1O60291 552 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 LSP1P33241 339 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 HDLBPQ00341 1268 aaKnown RBP11.1□□□□□ -0.63
NFKB1-212ENST00000600343 RESTQ13127 1097 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 ADCK5Q3MIX3 580 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 Q6ZUG5 572 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 CCDC170Q8IYT3 715 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 ENGASEQ8NFI3 743 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 ATRIPQ8WXE1 791 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 RUFY1Q96T51 708 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 NAPGQ99747 312 aaPredicted RBP11.1□□□□□ -0.63
NFKB1-212ENST00000600343 GGA2Q9UJY4 613 aa11.1□□□□□ -0.63
NFKB1-212ENST00000600343 MADDQ8WXG6 1647 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 A0A1B0GVG6 124 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 ATP4AP20648 1035 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 MAGEA10P43363 369 aaPredicted RBP11.09□□□□□ -0.63
NFKB1-212ENST00000600343 CTCFP49711 727 aaPredicted RBP11.09□□□□□ -0.63
NFKB1-212ENST00000600343 HDGFL1Q5TGJ6 251 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 SDCCAG8Q86SQ7 713 aaPredicted RBP11.09□□□□□ -0.63
NFKB1-212ENST00000600343 SLC35F6Q8N357 371 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 GALNT15Q8N3T1 639 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 MIPOL1Q8TD10 442 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 RANBP17Q9H2T7 1088 aaKnown RBP11.09□□□□□ -0.63
NFKB1-212ENST00000600343 NBPF7P0C2Y1 421 aaPredicted RBP11.09□□□□□ -0.63
NFKB1-212ENST00000600343 MYBL1P10243 752 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 G3BP1Q13283 466 aaKnown RBP eCLIP11.09□□□□□ -0.63
NFKB1-212ENST00000600343 RASA3Q14644 834 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 NCAPH2Q6IBW4 605 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 SLX1AQ9BQ83 275 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 DNAAF2Q9NVR5 837 aaKnown RBP11.09□□□□□ -0.63
NFKB1-212ENST00000600343 ZMYND10O75800 440 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 ME1P48163 572 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 NLRP12P59046 1061 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 BLMHQ13867 455 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 MTF1Q14872 753 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 ZNF570Q96NI8 536 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 CCT8L2Q96SF2 557 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 ZSWIM6Q9HCJ5 1215 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
NFKB1-212ENST00000600343 PPFIA3O75145 1194 aa11.08□□□□□ -0.64
NFKB1-212ENST00000600343 SFSWAPQ12872 951 aaKnown RBP11.08□□□□□ -0.64
NFKB1-212ENST00000600343 AKNAD1Q5T1N1 836 aa11.08□□□□□ -0.64
NFKB1-212ENST00000600343 DDX46Q7L014 1031 aaKnown RBP11.08□□□□□ -0.64
NFKB1-212ENST00000600343 NLRP14Q86W24 1093 aa11.08□□□□□ -0.64
NFKB1-212ENST00000600343 ATL2Q8NHH9 583 aa11.08□□□□□ -0.64
NFKB1-212ENST00000600343 ZFAND2BQ8WV99 257 aa11.08□□□□□ -0.64
NFKB1-212ENST00000600343 CDC5LQ99459 802 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms