RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 TPH2Q8IWU9 490 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 LMNTD2Q8IXW0 634 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 PARD3BQ8TEW8 1205 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 GJA10Q969M2 543 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 CCDC47Q96A33 483 aaKnown RBP6.33□□□□□ -1.4
PAF1-208ENST00000598594 CCDC74AQ96AQ1 378 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 EIF2AK1Q9BQI3 630 aaKnown RBP6.33□□□□□ -1.4
PAF1-208ENST00000598594 TRIM56Q9BRZ2 755 aaKnown RBP6.33□□□□□ -1.4
PAF1-208ENST00000598594 SAGE1Q9NXZ1 904 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 IP6K2Q9UHH9 426 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 ODF2LQ9ULJ1 636 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 PPT2Q9UMR5 302 aa6.33□□□□□ -1.4
PAF1-208ENST00000598594 PPP1R12BO60237 982 aaPredicted RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 FAM153BP0C7A2 387 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 NCAM1P13591 858 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 TDO2P48775 406 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 GTF2A2P52657 109 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 EIF6P56537 245 aaKnown RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 KRT72Q14CN4 511 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 GJC2Q5T442 439 aaPredicted RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 SWT1Q5T5J6 900 aaKnown RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 RNF219Q5W0B1 726 aaPredicted RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 MZT2BQ6NZ67 158 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 NXPE4Q6UWF7 544 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 SAMD7Q7Z3H4 446 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 TRIM22Q8IYM9 498 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 ARMC2Q8NEN0 867 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 RPGRQ92834 1020 aaKnown RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 NKD1Q969G9 470 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 MTRQ99707 1265 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 CENPOQ9BU64 300 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 TARS2Q9BW92 718 aaKnown RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 CXorf56Q9H5V9 222 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 PHTF1Q9UMS5 762 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 SUPT16HQ9Y5B9 1047 aaKnown RBP6.32□□□□□ -1.4
PAF1-208ENST00000598594 PCDHB11Q9Y5F2 797 aa6.32□□□□□ -1.4
PAF1-208ENST00000598594 TMEM229AB2RXF0 380 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 RFPL3O75679 317 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 MICAL2O94851 1124 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 U2AF1L5P0DN76 240 aaPredicted RBP6.31□□□□□ -1.4
PAF1-208ENST00000598594 OAS2P29728 719 aaKnown RBP6.31□□□□□ -1.4
PAF1-208ENST00000598594 ADD2P35612 726 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 TSPAN7P41732 249 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 U2AF1Q01081 240 aaKnown RBP eCLIP6.31□□□□□ -1.4
PAF1-208ENST00000598594 STRN3Q13033 797 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 TBX2Q13207 712 aaPredicted RBP6.31□□□□□ -1.4
PAF1-208ENST00000598594 ELF2Q15723 593 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 MINDY4Q4G0A6 757 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 PRPF40BQ6NWY9 871 aaKnown RBP6.31□□□□□ -1.4
PAF1-208ENST00000598594 CNNM4Q6P4Q7 775 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 NELL1Q92832 810 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 TNIP3Q96KP6 325 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 FMNL2Q96PY5 1086 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 TRIM8Q9BZR9 551 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 SRCIN1Q9C0H9 1055 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 NLRC4Q9NPP4 1024 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 LUC7LQ9NQ29 371 aaKnown RBP6.31□□□□□ -1.4
PAF1-208ENST00000598594 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
PAF1-208ENST00000598594 PGAP2Q9UHJ9 254 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 TRHDEQ9UKU6 1024 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 DMTF1Q9Y222 760 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 PCDHGB3Q9Y5G1 929 aa6.31□□□□□ -1.4
PAF1-208ENST00000598594 TNKSO95271 1327 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 A6NHS1 94 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 C9IYK1 514 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 F5H423 210 aaPredicted RBP6.3□□□□□ -1.4
PAF1-208ENST00000598594 GREM1O60565 184 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 DDAH1O94760 285 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 PCSK2P16519 638 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 FLT3P36888 993 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 ZAP70P43403 619 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 GIPRP48546 466 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 CCT5P48643 541 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 NBPF14Q5TI25 921 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 SH3RF1Q7Z6J0 888 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 NKAPQ8N5F7 415 aaKnown RBP6.3□□□□□ -1.4
PAF1-208ENST00000598594 CEP120Q8N960 986 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 TBC1D20Q96BZ9 403 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 YTHDC1Q96MU7 727 aaKnown RBP6.3□□□□□ -1.4
PAF1-208ENST00000598594 CRBNQ96SW2 442 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 GGNBP2Q9H3C7 697 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 SH3GLB2Q9NR46 395 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 SPEF1Q9Y4P9 236 aa6.3□□□□□ -1.4
PAF1-208ENST00000598594 FAM170AA1A519 330 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 J3KRW8 73 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 GABRDO14764 452 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 BACH1O14867 736 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 PMM2O15305 246 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 CFHP08603 1231 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 LMNB1P20700 586 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 GGCXP38435 758 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 GRM3Q14832 879 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 GRIN2CQ14957 1233 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 CCDC85BQ15834 202 aaPredicted RBP6.29□□□□□ -1.4
PAF1-208ENST00000598594 PTPRNQ16849 979 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 NBPF9Q3BBW0 867 aa6.29□□□□□ -1.4
PAF1-208ENST00000598594 ERICH6BQ5W0A0 696 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms