RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-222	ENST00000598256	ZNF70	Q9UC06	446 aa	Predicted RBP	19.03	■□□□□ 0.64
LTBP4-222	ENST00000598256	PATL2	C9JE40	543 aa	Known RBP	19.02	■□□□□ 0.64
LTBP4-222	ENST00000598256	TDO2	P48775	406 aa		19.02	■□□□□ 0.64
LTBP4-222	ENST00000598256	CACNB3	P54284	484 aa		19.02	■□□□□ 0.64
LTBP4-222	ENST00000598256	LSG1	Q9H089	658 aa	Known RBP	19.02	■□□□□ 0.64
LTBP4-222	ENST00000598256	NAPB	Q9H115	298 aa		19.02	■□□□□ 0.64
LTBP4-222	ENST00000598256	SIPA1L1	O43166	1804 aa		19.02	■□□□□ 0.63
LTBP4-222	ENST00000598256	FLT1	P17948	1338 aa		19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	GSG1L2	A8MUP6	293 aa		19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	WDHD1	O75717	1129 aa	Predicted RBP	19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	PTH1R	Q03431	593 aa		19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	USP50	Q70EL3	339 aa	Predicted RBP	19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	MAPKAPK5	Q8IW41	473 aa		19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	BACH2	Q9BYV9	841 aa		19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	TAF1D	Q9H5J8	278 aa	Predicted RBP	19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	ATP8A2	Q9NTI2	1148 aa		19.01	■□□□□ 0.63
LTBP4-222	ENST00000598256	TCP10L2	B9ZVM9	353 aa		19	■□□□□ 0.63
LTBP4-222	ENST00000598256	SEC24B	O95487	1268 aa		19	■□□□□ 0.63
LTBP4-222	ENST00000598256	EAPP	Q56P03	285 aa	Predicted RBP	19	■□□□□ 0.63
LTBP4-222	ENST00000598256	IFNL3	Q8IZI9	196 aa		19	■□□□□ 0.63
LTBP4-222	ENST00000598256	IDI2	Q9BXS1	227 aa		19	■□□□□ 0.63
LTBP4-222	ENST00000598256	DCP1A	Q9NPI6	582 aa	Predicted RBP	19	■□□□□ 0.63
LTBP4-222	ENST00000598256	GGA3	Q9NZ52	723 aa		19	■□□□□ 0.63
LTBP4-222	ENST00000598256	ASTN2	O75129	1339 aa	Predicted RBP	19	■□□□□ 0.63
LTBP4-222	ENST00000598256	ZMYM6	O95789	1325 aa		19	■□□□□ 0.63
LTBP4-222	ENST00000598256	FOXP2	O15409	715 aa		18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	TNNI2	P48788	182 aa		18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	HIRA	P54198	1017 aa	Predicted RBP	18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	NFIA	Q12857	509 aa		18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	TNFAIP1	Q13829	316 aa		18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	ANGEL2	Q5VTE6	544 aa	Known RBP	18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	PNMA8A	Q86V59	439 aa	Predicted RBP	18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	AMOTL1	Q8IY63	956 aa		18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	UPF2	Q9HAU5	1272 aa	Known RBP	18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	DDX4	Q9NQI0	724 aa	Known RBP	18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	MCM9	Q9NXL9	1143 aa		18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256		U3KPZ7	1027 aa	Predicted RBP	18.99	■□□□□ 0.63
LTBP4-222	ENST00000598256	COL2A1	P02458	1487 aa	Predicted RBP	18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	TCP10	Q12799	353 aa		18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	GIMAP6	Q6P9H5	292 aa		18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	APOBEC3F	Q8IUX4	373 aa	Known RBP	18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	MAP4K1	Q92918	833 aa		18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	OSBPL5	Q9H0X9	879 aa	Predicted RBP	18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	CTNNA3	Q9UI47	895 aa		18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	RBM8A	Q9Y5S9	174 aa	Known RBP	18.98	■□□□□ 0.63
LTBP4-222	ENST00000598256	EPB41L2	O43491	1005 aa	Known RBP	18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	ENTPD3	O75355	529 aa		18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	NPM3	O75607	178 aa	Known RBP	18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	MCC	P23508	829 aa		18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	FKBP1C	Q5VVH2	108 aa		18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	FAM198A	Q9UFP1	575 aa		18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	SAP30BP	Q9UHR5	308 aa	Known RBP	18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	PITPNM2	Q9BZ72	1349 aa		18.97	■□□□□ 0.63
LTBP4-222	ENST00000598256	FGA	P02671	866 aa		18.96	■□□□□ 0.63
LTBP4-222	ENST00000598256	POLR3D	P05423	398 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-222	ENST00000598256	ALX1	Q15699	326 aa		18.96	■□□□□ 0.63
LTBP4-222	ENST00000598256	SLC4A8	Q2Y0W8	1093 aa		18.96	■□□□□ 0.63
LTBP4-222	ENST00000598256	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.96	■□□□□ 0.63
LTBP4-222	ENST00000598256	DCPS	Q96C86	337 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-222	ENST00000598256	MKRN1	Q9UHC7	482 aa	Known RBP	18.96	■□□□□ 0.63
LTBP4-222	ENST00000598256	ATAD5	Q96QE3	1844 aa		18.95	■□□□□ 0.62
LTBP4-222	ENST00000598256	CNTNAP1	P78357	1384 aa		18.95	■□□□□ 0.62
LTBP4-222	ENST00000598256	HLA-DOA	P06340	250 aa		18.95	■□□□□ 0.62
LTBP4-222	ENST00000598256	IMMT	Q16891	758 aa	Known RBP	18.95	■□□□□ 0.62
LTBP4-222	ENST00000598256	FAM83A	Q86UY5	434 aa		18.95	■□□□□ 0.62
LTBP4-222	ENST00000598256	USP26	Q9BXU7	913 aa		18.95	■□□□□ 0.62
LTBP4-222	ENST00000598256	CLEC11A	Q9Y240	323 aa		18.95	■□□□□ 0.62
LTBP4-222	ENST00000598256	MINDY4B	A8MYZ0	360 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	USP17L12	C9JPN9	530 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	USP17L21	D6R901	530 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	POTEI	P0CG38	1075 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	POTEJ	P0CG39	1038 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	RNF20	Q5VTR2	975 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	CTR9	Q6PD62	1173 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	ZC3H15	Q8WU90	426 aa	Known RBP	18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	FAM151A	Q8WW52	585 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	CREBZF	Q9NS37	354 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	PALD1	Q9ULE6	856 aa		18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	SCAF8	Q9UPN6	1271 aa	Known RBP	18.94	■□□□□ 0.62
LTBP4-222	ENST00000598256	ATRNL1	Q5VV63	1379 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	ZNF213	O14771	459 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	FOXN1	O15353	648 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	HAND2	P61296	217 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	PPARA	Q07869	468 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	RASA3	Q14644	834 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	SBK1	Q52WX2	424 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	TTC6	Q86TZ1	520 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	SULF1	Q8IWU6	871 aa		18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	DHX36	Q9H2U1	1008 aa	Known RBP	18.93	■□□□□ 0.62
LTBP4-222	ENST00000598256	CYP2D7	A0A087X1C5	515 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	CYP2D6	P10635	497 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	HSPA4	P34932	840 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	NECTIN1	Q15223	517 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	CREB3L3	Q68CJ9	461 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	ZFPM1	Q8IX07	1006 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	TMEM39B	Q9GZU3	492 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	PPP2R3B	Q9Y5P8	575 aa		18.92	■□□□□ 0.62
LTBP4-222	ENST00000598256	TRPM7	Q96QT4	1865 aa		18.92	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms