RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 ERC1Q8IUD2 1116 aa28.23■■■□□ 2.11
SSBP4-205ENST00000598159 DDX19BQ9UMR2 479 aa28.23■■■□□ 2.11
SSBP4-205ENST00000598159 RHBDL3P58872 404 aa28.22■■■□□ 2.11
SSBP4-205ENST00000598159 HSP90AB4PQ58FF6 505 aa28.22■■■□□ 2.11
SSBP4-205ENST00000598159 NOL9Q5SY16 702 aaKnown RBP28.22■■■□□ 2.11
SSBP4-205ENST00000598159 CHMP4BQ9H444 224 aaKnown RBP28.22■■■□□ 2.11
SSBP4-205ENST00000598159 ZFYVE28Q9HCC9 887 aa28.22■■■□□ 2.11
SSBP4-205ENST00000598159 MAP3K10Q02779 954 aa28.21■■■□□ 2.11
SSBP4-205ENST00000598159 FBXO46Q6PJ61 603 aaPredicted RBP28.21■■■□□ 2.11
SSBP4-205ENST00000598159 RPAP2Q8IXW5 612 aaPredicted RBP28.21■■■□□ 2.11
SSBP4-205ENST00000598159 EAF2Q96CJ1 260 aaPredicted RBP28.21■■■□□ 2.11
SSBP4-205ENST00000598159 ERO1AQ96HE7 468 aa28.21■■■□□ 2.11
SSBP4-205ENST00000598159 ZCCHC17Q9NP64 241 aaKnown RBP28.21■■■□□ 2.11
SSBP4-205ENST00000598159 DDX4Q9NQI0 724 aaKnown RBP28.21■■■□□ 2.11
SSBP4-205ENST00000598159 SNRKQ9NRH2 765 aa28.21■■■□□ 2.11
SSBP4-205ENST00000598159 PICALMQ13492 652 aa28.2■■■□□ 2.1
SSBP4-205ENST00000598159 TAF1CQ15572 869 aaPredicted RBP28.2■■■□□ 2.1
SSBP4-205ENST00000598159 SH3BP5LQ7L8J4 393 aa28.2■■■□□ 2.1
SSBP4-205ENST00000598159 CCDC8Q9H0W5 538 aaPredicted RBP28.2■■■□□ 2.1
SSBP4-205ENST00000598159 DBNLQ9UJU6 430 aaKnown RBP28.2■■■□□ 2.1
SSBP4-205ENST00000598159 HPS5Q9UPZ3 1129 aa28.2■■■□□ 2.1
SSBP4-205ENST00000598159 COG6Q9Y2V7 657 aa28.2■■■□□ 2.1
SSBP4-205ENST00000598159 RFX7Q2KHR2 1363 aa28.2■■■□□ 2.1
SSBP4-205ENST00000598159 DDTLA6NHG4 134 aaPredicted RBP28.19■■■□□ 2.1
SSBP4-205ENST00000598159 PHF20L1A8MW92 1017 aa28.19■■■□□ 2.1
SSBP4-205ENST00000598159 SP3Q02447 781 aa28.19■■■□□ 2.1
SSBP4-205ENST00000598159 FAM43AQ8N2R8 423 aa28.19■■■□□ 2.1
SSBP4-205ENST00000598159 NOL10Q9BSC4 688 aaKnown RBP28.19■■■□□ 2.1
SSBP4-205ENST00000598159 CYP2E1P05181 493 aaPredicted RBP28.18■■■□□ 2.1
SSBP4-205ENST00000598159 ZBTB40Q9NUA8 1239 aa28.18■■■□□ 2.1
SSBP4-205ENST00000598159 EXOC6BQ9Y2D4 811 aa28.18■■■□□ 2.1
SSBP4-205ENST00000598159 ATRNL1Q5VV63 1379 aa28.17■■■□□ 2.1
SSBP4-205ENST00000598159 NAA16Q6N069 864 aaPredicted RBP28.17■■■□□ 2.1
SSBP4-205ENST00000598159 KCNH4Q9UQ05 1017 aa28.17■■■□□ 2.1
SSBP4-205ENST00000598159 BTBD19C9JJ37 291 aa28.16■■■□□ 2.1
SSBP4-205ENST00000598159 TBC1D12O60347 775 aa28.16■■■□□ 2.1
SSBP4-205ENST00000598159 HMMRO75330 724 aa28.16■■■□□ 2.1
SSBP4-205ENST00000598159 BAG3O95817 575 aa28.16■■■□□ 2.1
SSBP4-205ENST00000598159 ZAP70P43403 619 aa28.16■■■□□ 2.1
SSBP4-205ENST00000598159 MLLT1Q03111 559 aaPredicted RBP28.16■■■□□ 2.1
SSBP4-205ENST00000598159 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.16■■■□□ 2.1
SSBP4-205ENST00000598159 TRIM17Q9Y577 477 aa28.16■■■□□ 2.1
SSBP4-205ENST00000598159 PLCG2P16885 1265 aa28.15■■■□□ 2.1
SSBP4-205ENST00000598159 OTOP1Q7RTM1 612 aa28.15■■■□□ 2.1
SSBP4-205ENST00000598159 SCYL3Q8IZE3 742 aa28.15■■■□□ 2.1
SSBP4-205ENST00000598159 TLR7Q9NYK1 1049 aaKnown RBP28.15■■■□□ 2.1
SSBP4-205ENST00000598159 DOCK2Q92608 1830 aa28.15■■■□□ 2.1
SSBP4-205ENST00000598159 CXCL11O14625 94 aa28.14■■■□□ 2.1
SSBP4-205ENST00000598159 CTNND1O60716 968 aaKnown RBP28.14■■■□□ 2.1
SSBP4-205ENST00000598159 PPP4CP60510 307 aa28.14■■■□□ 2.1
SSBP4-205ENST00000598159 ARHGEF6Q15052 776 aa28.14■■■□□ 2.1
SSBP4-205ENST00000598159 CD99L2Q8TCZ2 262 aa28.14■■■□□ 2.1
SSBP4-205ENST00000598159 PICK1Q9NRD5 415 aa28.14■■■□□ 2.1
SSBP4-205ENST00000598159 TLR2O60603 784 aa28.13■■■□□ 2.09
SSBP4-205ENST00000598159 PDE3AQ14432 1141 aa28.13■■■□□ 2.09
SSBP4-205ENST00000598159 AACSQ86V21 672 aa28.13■■■□□ 2.09
SSBP4-205ENST00000598159 TEX11Q8IYF3 940 aa28.13■■■□□ 2.09
SSBP4-205ENST00000598159 RHPN1Q8TCX5 695 aa28.13■■■□□ 2.09
SSBP4-205ENST00000598159 ANKRD23Q86SG2 305 aa28.12■■■□□ 2.09
SSBP4-205ENST00000598159 OSBPL5Q9H0X9 879 aaPredicted RBP28.12■■■□□ 2.09
SSBP4-205ENST00000598159 EFCC1Q9HA90 598 aa28.12■■■□□ 2.09
SSBP4-205ENST00000598159 PTPRAP18433 802 aa28.11■■■□□ 2.09
SSBP4-205ENST00000598159 SH3RF3Q8TEJ3 882 aaPredicted RBP28.11■■■□□ 2.09
SSBP4-205ENST00000598159 KIF1BPQ96EK5 621 aa28.11■■■□□ 2.09
SSBP4-205ENST00000598159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.11■■■□□ 2.09
SSBP4-205ENST00000598159 PIH1D3Q9NQM4 214 aaKnown RBP28.11■■■□□ 2.09
SSBP4-205ENST00000598159 AATFQ9NY61 560 aaKnown RBP eCLIP28.11■■■□□ 2.09
SSBP4-205ENST00000598159 ZHX2Q9Y6X8 837 aa28.11■■■□□ 2.09
SSBP4-205ENST00000598159 SIRT2Q8IXJ6 389 aa28.1■■■□□ 2.09
SSBP4-205ENST00000598159 CLASRPQ8N2M8 674 aaKnown RBP28.1■■■□□ 2.09
SSBP4-205ENST00000598159 COL2A1P02458 1487 aaPredicted RBP28.09■■■□□ 2.09
SSBP4-205ENST00000598159 RAB11FIP3O75154 756 aa28.09■■■□□ 2.09
SSBP4-205ENST00000598159 DHX36Q9H2U1 1008 aaKnown RBP28.09■■■□□ 2.09
SSBP4-205ENST00000598159 IL1RAPL2Q9NP60 686 aa28.09■■■□□ 2.09
SSBP4-205ENST00000598159 PTPN22Q9Y2R2 807 aa28.09■■■□□ 2.09
SSBP4-205ENST00000598159 AFG3L2Q9Y4W6 797 aa28.09■■■□□ 2.09
SSBP4-205ENST00000598159 MYO5AQ9Y4I1 1855 aaKnown RBP28.08■■■□□ 2.09
SSBP4-205ENST00000598159 PDHXO00330 501 aa28.08■■■□□ 2.09
SSBP4-205ENST00000598159 SOX10P56693 466 aa28.08■■■□□ 2.09
SSBP4-205ENST00000598159 TMED8Q6PL24 325 aaPredicted RBP28.08■■■□□ 2.09
SSBP4-205ENST00000598159 SLURP2P0DP57 97 aa28.07■■■□□ 2.08
SSBP4-205ENST00000598159 MOGSQ13724 837 aa28.07■■■□□ 2.08
SSBP4-205ENST00000598159 FASTKD5Q7L8L6 764 aaKnown RBP28.07■■■□□ 2.08
SSBP4-205ENST00000598159 ADGRA1Q86SQ6 560 aa28.07■■■□□ 2.08
SSBP4-205ENST00000598159 PI4KBQ9UBF8 816 aa28.07■■■□□ 2.08
SSBP4-205ENST00000598159 IDH1O75874 414 aaKnown RBP28.06■■■□□ 2.08
SSBP4-205ENST00000598159 CYP7A1P22680 504 aa28.06■■■□□ 2.08
SSBP4-205ENST00000598159 KIF22Q14807 665 aa28.06■■■□□ 2.08
SSBP4-205ENST00000598159 TGFBRAP1Q8WUH2 860 aa28.06■■■□□ 2.08
SSBP4-205ENST00000598159 HERC5Q9UII4 1024 aaKnown RBP28.06■■■□□ 2.08
SSBP4-205ENST00000598159 MAP3K12Q12852 859 aa28.05■■■□□ 2.08
SSBP4-205ENST00000598159 MAST2Q6P0Q8 1798 aa28.05■■■□□ 2.08
SSBP4-205ENST00000598159 C17orf99Q6UX52 265 aa28.05■■■□□ 2.08
SSBP4-205ENST00000598159 CERS3Q8IU89 383 aa28.05■■■□□ 2.08
SSBP4-205ENST00000598159 A0A0G2JLL6 359 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-205ENST00000598159 APBB1O00213 710 aa28.04■■■□□ 2.08
SSBP4-205ENST00000598159 IFIT2P09913 472 aaKnown RBP28.04■■■□□ 2.08
SSBP4-205ENST00000598159 C20orf194Q5TEA3 1177 aa28.04■■■□□ 2.08
SSBP4-205ENST00000598159 PRRT2Q7Z6L0 340 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-205ENST00000598159 FOXP4Q8IVH2 680 aaPredicted RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms