RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 FGFR2P21802 821 aa13.77□□□□□ -0.21
ZNF548-207ENST00000597400 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-207ENST00000597400 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.21
ZNF548-207ENST00000597400 RABL6Q3YEC7 729 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-207ENST00000597400 METTL24Q5JXM2 366 aa13.77□□□□□ -0.21
ZNF548-207ENST00000597400 PRRT2Q7Z6L0 340 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-207ENST00000597400 CRISPLD2Q9H0B8 497 aa13.77□□□□□ -0.21
ZNF548-207ENST00000597400 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.77□□□□□ -0.21
ZNF548-207ENST00000597400 SIPA1L1O43166 1804 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 PHF20L1A8MW92 1017 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 ALDH1L1O75891 902 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 PRDX5P30044 214 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 MAST2Q6P0Q8 1798 aa13.76□□□□□ -0.21
ZNF548-207ENST00000597400 MUC3AQ02505 3323 aa13.75□□□□□ -0.21
ZNF548-207ENST00000597400 TFRCP02786 760 aaKnown RBP13.75□□□□□ -0.21
ZNF548-207ENST00000597400 IRF5Q13568 498 aa13.75□□□□□ -0.21
ZNF548-207ENST00000597400 CCDC84Q86UT8 332 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-207ENST00000597400 C7orf61Q8IZ16 206 aa13.75□□□□□ -0.21
ZNF548-207ENST00000597400 PXYLP1Q8TE99 480 aa13.75□□□□□ -0.21
ZNF548-207ENST00000597400 SRCIN1Q9C0H9 1055 aa13.75□□□□□ -0.21
ZNF548-207ENST00000597400 ZMYND8Q9ULU4 1186 aaPredicted RBP13.75□□□□□ -0.21
ZNF548-207ENST00000597400 KIF16BQ96L93 1317 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 CXCL11O14625 94 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
ZNF548-207ENST00000597400 PTPRAP18433 802 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 BMP8BP34820 402 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 GADL1Q6ZQY3 521 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 SH3BP5LQ7L8J4 393 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 DEFB123Q8N688 67 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 ZHX2Q9Y6X8 837 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 CDK5RAP2Q96SN8 1893 aa13.74□□□□□ -0.21
ZNF548-207ENST00000597400 SYN1P17600 705 aa13.73□□□□□ -0.21
ZNF548-207ENST00000597400 TRIM32Q13049 653 aa13.73□□□□□ -0.21
ZNF548-207ENST00000597400 SCYL3Q8IZE3 742 aa13.73□□□□□ -0.21
ZNF548-207ENST00000597400 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.73□□□□□ -0.21
ZNF548-207ENST00000597400 TAOK2Q9UL54 1235 aa13.73□□□□□ -0.21
ZNF548-207ENST00000597400 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
ZNF548-207ENST00000597400 LTBP2Q14767 1821 aa13.72□□□□□ -0.21
ZNF548-207ENST00000597400 PUM3Q15397 648 aaKnown RBP13.72□□□□□ -0.21
ZNF548-207ENST00000597400 TREML2Q5T2D2 321 aa13.72□□□□□ -0.21
ZNF548-207ENST00000597400 MAGEA10P43363 369 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-207ENST00000597400 RFX5P48382 616 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-207ENST00000597400 RGS3P49796 1198 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 FASTKD5Q7L8L6 764 aaKnown RBP13.71□□□□□ -0.21
ZNF548-207ENST00000597400 NECAB2Q7Z6G3 386 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 ANKRD13CQ8N6S4 541 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 WDR66Q8TBY9 1149 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-207ENST00000597400 USP40Q9NVE5 1235 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 MTMR10Q9NXD2 777 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 STXBP5LQ9Y2K9 1186 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 SLC45A1Q9Y2W3 748 aa13.71□□□□□ -0.21
ZNF548-207ENST00000597400 COL2A1P02458 1487 aaPredicted RBP13.71□□□□□ -0.21
ZNF548-207ENST00000597400 PFASO15067 1338 aa13.7□□□□□ -0.22
ZNF548-207ENST00000597400 DDTLA6NHG4 134 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-207ENST00000597400 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
ZNF548-207ENST00000597400 IFIT1P09914 478 aaKnown RBP13.7□□□□□ -0.22
ZNF548-207ENST00000597400 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
ZNF548-207ENST00000597400 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
ZNF548-207ENST00000597400 WDR63Q8IWG1 891 aa13.7□□□□□ -0.22
ZNF548-207ENST00000597400 SMCR8Q8TEV9 937 aaPredicted RBP13.7□□□□□ -0.22
ZNF548-207ENST00000597400 DDX4Q9NQI0 724 aaKnown RBP13.7□□□□□ -0.22
ZNF548-207ENST00000597400 MAP3K10Q02779 954 aa13.69□□□□□ -0.22
ZNF548-207ENST00000597400 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
ZNF548-207ENST00000597400 TDHQ8IZJ6 230 aa13.69□□□□□ -0.22
ZNF548-207ENST00000597400 PICK1Q9NRD5 415 aa13.69□□□□□ -0.22
ZNF548-207ENST00000597400 AGTPBP1Q9UPW5 1226 aa13.69□□□□□ -0.22
ZNF548-207ENST00000597400 FOCADQ5VW36 1801 aa13.69□□□□□ -0.22
ZNF548-207ENST00000597400 GAKO14976 1311 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 HMGCRP04035 888 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 LDHBP07195 334 aaKnown RBP13.68□□□□□ -0.22
ZNF548-207ENST00000597400 FAM110CQ1W6H9 321 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 ANKLE1Q8NAG6 615 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 LPIN2Q92539 896 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
ZNF548-207ENST00000597400 SALL1Q9NSC2 1324 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 EYA2O00167 538 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 ENTPD3O75355 529 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 SLC5A1P13866 664 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 CAPN2P17655 700 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-207ENST00000597400 PHKA1P46020 1223 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 TRIB2Q92519 343 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 COA7Q96BR5 231 aa13.67□□□□□ -0.22
ZNF548-207ENST00000597400 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
ZNF548-207ENST00000597400 RPTORQ8N122 1335 aa13.66□□□□□ -0.22
ZNF548-207ENST00000597400 PEX10O60683 326 aa13.66□□□□□ -0.22
ZNF548-207ENST00000597400 GUCD1Q96NT3 240 aa13.66□□□□□ -0.22
ZNF548-207ENST00000597400 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
ZNF548-207ENST00000597400 USP44Q9H0E7 712 aa13.66□□□□□ -0.22
ZNF548-207ENST00000597400 C11orf49Q9H6J7 331 aa13.66□□□□□ -0.22
ZNF548-207ENST00000597400 OGDHLQ9ULD0 1010 aa13.66□□□□□ -0.22
ZNF548-207ENST00000597400 CTNND1O60716 968 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms