RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 CRHR2Q13324 411 aa31.16■■■□□ 2.58
ZNF558-203ENST00000595786 SNAPC2Q13487 334 aa31.16■■■□□ 2.58
ZNF558-203ENST00000595786 NOL9Q5SY16 702 aaKnown RBP31.16■■■□□ 2.58
ZNF558-203ENST00000595786 LRP2BPQ9P2M1 347 aa31.16■■■□□ 2.58
ZNF558-203ENST00000595786 DDX19BQ9UMR2 479 aa31.16■■■□□ 2.58
ZNF558-203ENST00000595786 RHBDL3P58872 404 aa31.15■■■□□ 2.58
ZNF558-203ENST00000595786 HSP90AB4PQ58FF6 505 aa31.15■■■□□ 2.58
ZNF558-203ENST00000595786 IRF6O14896 467 aa31.14■■■□□ 2.58
ZNF558-203ENST00000595786 RPAP2Q8IXW5 612 aaPredicted RBP31.14■■■□□ 2.58
ZNF558-203ENST00000595786 FBXO46Q6PJ61 603 aaPredicted RBP31.13■■■□□ 2.57
ZNF558-203ENST00000595786 ERO1AQ96HE7 468 aa31.13■■■□□ 2.57
ZNF558-203ENST00000595786 ATRNL1Q5VV63 1379 aa31.13■■■□□ 2.57
ZNF558-203ENST00000595786 SH3BP5LQ7L8J4 393 aa31.12■■■□□ 2.57
ZNF558-203ENST00000595786 ZSCAN29Q8IWY8 852 aaPredicted RBP31.12■■■□□ 2.57
ZNF558-203ENST00000595786 EAF2Q96CJ1 260 aaPredicted RBP31.12■■■□□ 2.57
ZNF558-203ENST00000595786 ZFYVE28Q9HCC9 887 aa31.12■■■□□ 2.57
ZNF558-203ENST00000595786 DDX4Q9NQI0 724 aaKnown RBP31.12■■■□□ 2.57
ZNF558-203ENST00000595786 DBNLQ9UJU6 430 aaKnown RBP31.12■■■□□ 2.57
ZNF558-203ENST00000595786 ZBTB40Q9NUA8 1239 aa31.11■■■□□ 2.57
ZNF558-203ENST00000595786 HPS5Q9UPZ3 1129 aa31.11■■■□□ 2.57
ZNF558-203ENST00000595786 PHF20L1A8MW92 1017 aa31.1■■■□□ 2.57
ZNF558-203ENST00000595786 SP3Q02447 781 aa31.1■■■□□ 2.57
ZNF558-203ENST00000595786 TAF1CQ15572 869 aaPredicted RBP31.1■■■□□ 2.57
ZNF558-203ENST00000595786 SNRKQ9NRH2 765 aa31.1■■■□□ 2.57
ZNF558-203ENST00000595786 KCNH4Q9UQ05 1017 aa31.1■■■□□ 2.57
ZNF558-203ENST00000595786 DDTLA6NHG4 134 aaPredicted RBP31.09■■■□□ 2.57
ZNF558-203ENST00000595786 CYP2E1P05181 493 aaPredicted RBP31.09■■■□□ 2.57
ZNF558-203ENST00000595786 PICALMQ13492 652 aa31.09■■■□□ 2.57
ZNF558-203ENST00000595786 FAM43AQ8N2R8 423 aa31.09■■■□□ 2.57
ZNF558-203ENST00000595786 NOL10Q9BSC4 688 aaKnown RBP31.09■■■□□ 2.57
ZNF558-203ENST00000595786 CCDC8Q9H0W5 538 aaPredicted RBP31.09■■■□□ 2.57
ZNF558-203ENST00000595786 COG6Q9Y2V7 657 aa31.09■■■□□ 2.57
ZNF558-203ENST00000595786 TBC1D12O60347 775 aa31.08■■■□□ 2.57
ZNF558-203ENST00000595786 HMMRO75330 724 aa31.08■■■□□ 2.57
ZNF558-203ENST00000595786 BAG3O95817 575 aa31.08■■■□□ 2.57
ZNF558-203ENST00000595786 NAA16Q6N069 864 aaPredicted RBP31.08■■■□□ 2.57
ZNF558-203ENST00000595786 EXOC6BQ9Y2D4 811 aa31.08■■■□□ 2.57
ZNF558-203ENST00000595786 COL2A1P02458 1487 aaPredicted RBP31.08■■■□□ 2.57
ZNF558-203ENST00000595786 DOCK2Q92608 1830 aa31.08■■■□□ 2.57
ZNF558-203ENST00000595786 PLCG2P16885 1265 aa31.07■■■□□ 2.56
ZNF558-203ENST00000595786 PPP4CP60510 307 aa31.07■■■□□ 2.56
ZNF558-203ENST00000595786 PDE3AQ14432 1141 aa31.07■■■□□ 2.56
ZNF558-203ENST00000595786 BTBD19C9JJ37 291 aa31.06■■■□□ 2.56
ZNF558-203ENST00000595786 CXCL11O14625 94 aa31.06■■■□□ 2.56
ZNF558-203ENST00000595786 ZAP70P43403 619 aa31.06■■■□□ 2.56
ZNF558-203ENST00000595786 ARHGEF6Q15052 776 aa31.06■■■□□ 2.56
ZNF558-203ENST00000595786 TMED8Q6PL24 325 aaPredicted RBP31.06■■■□□ 2.56
ZNF558-203ENST00000595786 OTOP1Q7RTM1 612 aa31.06■■■□□ 2.56
ZNF558-203ENST00000595786 SCYL3Q8IZE3 742 aa31.06■■■□□ 2.56
ZNF558-203ENST00000595786 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.06■■■□□ 2.56
ZNF558-203ENST00000595786 CTNND1O60716 968 aaKnown RBP31.05■■■□□ 2.56
ZNF558-203ENST00000595786 MLLT1Q03111 559 aaPredicted RBP31.05■■■□□ 2.56
ZNF558-203ENST00000595786 TLR7Q9NYK1 1049 aaKnown RBP31.05■■■□□ 2.56
ZNF558-203ENST00000595786 TRIM17Q9Y577 477 aa31.05■■■□□ 2.56
ZNF558-203ENST00000595786 TLR2O60603 784 aa31.04■■■□□ 2.56
ZNF558-203ENST00000595786 ANKRD23Q86SG2 305 aa31.04■■■□□ 2.56
ZNF558-203ENST00000595786 TEX11Q8IYF3 940 aa31.04■■■□□ 2.56
ZNF558-203ENST00000595786 RHPN1Q8TCX5 695 aa31.04■■■□□ 2.56
ZNF558-203ENST00000595786 OSBPL5Q9H0X9 879 aaPredicted RBP31.04■■■□□ 2.56
ZNF558-203ENST00000595786 PICK1Q9NRD5 415 aa31.04■■■□□ 2.56
ZNF558-203ENST00000595786 AACSQ86V21 672 aa31.03■■■□□ 2.56
ZNF558-203ENST00000595786 CD99L2Q8TCZ2 262 aa31.03■■■□□ 2.56
ZNF558-203ENST00000595786 KIF1BPQ96EK5 621 aa31.02■■■□□ 2.56
ZNF558-203ENST00000595786 EFCC1Q9HA90 598 aa31.02■■■□□ 2.56
ZNF558-203ENST00000595786 RAB11FIP3O75154 756 aa31.01■■■□□ 2.55
ZNF558-203ENST00000595786 PTPRAP18433 802 aa31.01■■■□□ 2.55
ZNF558-203ENST00000595786 CERS3Q8IU89 383 aa31.01■■■□□ 2.55
ZNF558-203ENST00000595786 SIRT2Q8IXJ6 389 aa31.01■■■□□ 2.55
ZNF558-203ENST00000595786 SH3RF3Q8TEJ3 882 aaPredicted RBP31.01■■■□□ 2.55
ZNF558-203ENST00000595786 DHX36Q9H2U1 1008 aaKnown RBP31.01■■■□□ 2.55
ZNF558-203ENST00000595786 MAST2Q6P0Q8 1798 aa31.01■■■□□ 2.55
ZNF558-203ENST00000595786 CLASRPQ8N2M8 674 aaKnown RBP31■■■□□ 2.55
ZNF558-203ENST00000595786 PIH1D3Q9NQM4 214 aaKnown RBP31■■■□□ 2.55
ZNF558-203ENST00000595786 AATFQ9NY61 560 aaKnown RBP eCLIP31■■■□□ 2.55
ZNF558-203ENST00000595786 ZHX2Q9Y6X8 837 aa31■■■□□ 2.55
ZNF558-203ENST00000595786 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.99■■■□□ 2.55
ZNF558-203ENST00000595786 PTPN22Q9Y2R2 807 aa30.99■■■□□ 2.55
ZNF558-203ENST00000595786 MOGSQ13724 837 aa30.98■■■□□ 2.55
ZNF558-203ENST00000595786 FASTKD5Q7L8L6 764 aaKnown RBP30.98■■■□□ 2.55
ZNF558-203ENST00000595786 HERC5Q9UII4 1024 aaKnown RBP30.98■■■□□ 2.55
ZNF558-203ENST00000595786 AFG3L2Q9Y4W6 797 aa30.98■■■□□ 2.55
ZNF558-203ENST00000595786 IL1RAPL2Q9NP60 686 aa30.97■■■□□ 2.55
ZNF558-203ENST00000595786 PI4KBQ9UBF8 816 aa30.97■■■□□ 2.55
ZNF558-203ENST00000595786 MYO5AQ9Y4I1 1855 aaKnown RBP30.96■■■□□ 2.55
ZNF558-203ENST00000595786 PDHXO00330 501 aa30.96■■■□□ 2.55
ZNF558-203ENST00000595786 ADGRA1Q86SQ6 560 aa30.96■■■□□ 2.55
ZNF558-203ENST00000595786 A0A0G2JLL6 359 aaPredicted RBP30.95■■■□□ 2.55
ZNF558-203ENST00000595786 IDH1O75874 414 aaKnown RBP30.95■■■□□ 2.55
ZNF558-203ENST00000595786 CYP7A1P22680 504 aa30.95■■■□□ 2.55
ZNF558-203ENST00000595786 SOX10P56693 466 aa30.95■■■□□ 2.55
ZNF558-203ENST00000595786 MAP3K12Q12852 859 aa30.95■■■□□ 2.55
ZNF558-203ENST00000595786 C17orf99Q6UX52 265 aa30.95■■■□□ 2.55
ZNF558-203ENST00000595786 PRRT2Q7Z6L0 340 aaPredicted RBP30.95■■■□□ 2.55
ZNF558-203ENST00000595786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.95■■■□□ 2.55
ZNF558-203ENST00000595786 TBC1D2Q9BYX2 928 aa30.95■■■□□ 2.55
ZNF558-203ENST00000595786 KIF22Q14807 665 aa30.94■■■□□ 2.54
ZNF558-203ENST00000595786 TTF1Q15361 905 aaPredicted RBP30.94■■■□□ 2.54
ZNF558-203ENST00000595786 FOXP4Q8IVH2 680 aaPredicted RBP30.94■■■□□ 2.54
ZNF558-203ENST00000595786 TGFBRAP1Q8WUH2 860 aa30.94■■■□□ 2.54
ZNF558-203ENST00000595786 DOCK1Q14185 1865 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms