RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
LIG1-208ENST00000595758 UBE2Q2LH0YL09 131 aa17.32■□□□□ 0.36
LIG1-208ENST00000595758 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
LIG1-208ENST00000595758 ANGEL1Q9UNK9 670 aaKnown RBP17.32■□□□□ 0.36
LIG1-208ENST00000595758 RASSF10A6NK89 507 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 MBD4O95243 580 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 USP5P45974 858 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 MAPKAPK5Q8IW41 473 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 APPBP2Q92624 585 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 CRNKL1Q9BZJ0 848 aaKnown RBP17.31■□□□□ 0.36
LIG1-208ENST00000595758 OSBPL5Q9H0X9 879 aaPredicted RBP17.31■□□□□ 0.36
LIG1-208ENST00000595758 ARMT1Q9H993 441 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 MKRN1Q9UHC7 482 aaKnown RBP17.31■□□□□ 0.36
LIG1-208ENST00000595758 FZD1Q9UP38 647 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 SSC5DA1L4H1 1573 aa17.31■□□□□ 0.36
LIG1-208ENST00000595758 DDTLA6NHG4 134 aaPredicted RBP17.3■□□□□ 0.36
LIG1-208ENST00000595758 USP2O75604 605 aaPredicted RBP17.3■□□□□ 0.36
LIG1-208ENST00000595758 IREB2P48200 963 aaKnown RBP17.3■□□□□ 0.36
LIG1-208ENST00000595758 DCAF15Q66K64 600 aa17.3■□□□□ 0.36
LIG1-208ENST00000595758 PAXIP1Q6ZW49 1069 aaPredicted RBP17.3■□□□□ 0.36
LIG1-208ENST00000595758 LCORLQ8N3X6 602 aa17.3■□□□□ 0.36
LIG1-208ENST00000595758 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
LIG1-208ENST00000595758 AIDAQ96BJ3 306 aa17.3■□□□□ 0.36
LIG1-208ENST00000595758 HHIPL1Q96JK4 782 aa17.3■□□□□ 0.36
LIG1-208ENST00000595758 CSRNP1Q96S65 589 aa17.3■□□□□ 0.36
LIG1-208ENST00000595758 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
LIG1-208ENST00000595758 PAPPA2Q9BXP8 1791 aa17.3■□□□□ 0.36
LIG1-208ENST00000595758 FLT1P17948 1338 aa17.29■□□□□ 0.36
LIG1-208ENST00000595758 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
LIG1-208ENST00000595758 LDLRAD1Q5T700 205 aa17.29■□□□□ 0.36
LIG1-208ENST00000595758 MIGA2Q7L4E1 593 aa17.29■□□□□ 0.36
LIG1-208ENST00000595758 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
LIG1-208ENST00000595758 DNAJC5GQ8N7S2 189 aa17.29■□□□□ 0.36
LIG1-208ENST00000595758 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
LIG1-208ENST00000595758 ATRNL1Q5VV63 1379 aa17.28■□□□□ 0.36
LIG1-208ENST00000595758 MYH7P12883 1935 aa17.28■□□□□ 0.36
LIG1-208ENST00000595758 ZMYM1Q5SVZ6 1142 aa17.28■□□□□ 0.36
LIG1-208ENST00000595758 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
LIG1-208ENST00000595758 RGMBQ6NW40 437 aa17.28■□□□□ 0.36
LIG1-208ENST00000595758 DHX36Q9H2U1 1008 aaKnown RBP17.28■□□□□ 0.36
LIG1-208ENST00000595758 SAP30BPQ9UHR5 308 aaKnown RBP17.28■□□□□ 0.36
LIG1-208ENST00000595758 AK9Q5TCS8 1911 aa17.27■□□□□ 0.36
LIG1-208ENST00000595758 COL2A1P02458 1487 aaPredicted RBP17.27■□□□□ 0.36
LIG1-208ENST00000595758 UNCXA6NJT0 531 aa17.27■□□□□ 0.36
LIG1-208ENST00000595758 ECE1P42892 770 aa17.27■□□□□ 0.36
LIG1-208ENST00000595758 ZNF157P51786 506 aaPredicted RBP17.27■□□□□ 0.36
LIG1-208ENST00000595758 CYP4F22Q6NT55 531 aa17.27■□□□□ 0.36
LIG1-208ENST00000595758 KLRG1Q96E93 195 aa17.27■□□□□ 0.36
LIG1-208ENST00000595758 STRBPQ96SI9 672 aaKnown RBP17.27■□□□□ 0.36
LIG1-208ENST00000595758 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.36
LIG1-208ENST00000595758 PALD1Q9ULE6 856 aa17.27■□□□□ 0.36
LIG1-208ENST00000595758 M0R2C6 588 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 PRKAB2O43741 272 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 VEGFBP49765 207 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 GRM1Q13255 1194 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 SDR42E1Q8WUS8 393 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 CAPNS2Q96L46 248 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 PI4KBQ9UBF8 816 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
LIG1-208ENST00000595758 GPAA1O43292 621 aa17.25■□□□□ 0.35
LIG1-208ENST00000595758 HLA-DOAP06340 250 aa17.25■□□□□ 0.35
LIG1-208ENST00000595758 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
LIG1-208ENST00000595758 MAP3K10Q02779 954 aa17.25■□□□□ 0.35
LIG1-208ENST00000595758 ANKRD13AQ8IZ07 590 aa17.25■□□□□ 0.35
LIG1-208ENST00000595758 SLC10A4Q96EP9 437 aa17.25■□□□□ 0.35
LIG1-208ENST00000595758 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
LIG1-208ENST00000595758 SEC62Q99442 399 aaKnown RBP17.25■□□□□ 0.35
LIG1-208ENST00000595758 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
LIG1-208ENST00000595758 ATP8A2Q9NTI2 1148 aa17.25■□□□□ 0.35
LIG1-208ENST00000595758 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.25■□□□□ 0.35
LIG1-208ENST00000595758 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
LIG1-208ENST00000595758 TBC1D12O60347 775 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 GNAT2P19087 354 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 SDSP20132 328 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.24■□□□□ 0.35
LIG1-208ENST00000595758 TTC6Q86TZ1 520 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 SKAP1Q86WV1 359 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 FOXP4Q8IVH2 680 aaPredicted RBP17.24■□□□□ 0.35
LIG1-208ENST00000595758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIG1-208ENST00000595758 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 CLMNQ96JQ2 1002 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIG1-208ENST00000595758 HELLSQ9NRZ9 838 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 MCM9Q9NXL9 1143 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 ZNF112Q9UJU3 913 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 CSADQ9Y600 493 aa17.24■□□□□ 0.35
LIG1-208ENST00000595758 CDK5RAP2Q96SN8 1893 aa17.23■□□□□ 0.35
LIG1-208ENST00000595758 HIP1O00291 1037 aa17.23■□□□□ 0.35
LIG1-208ENST00000595758 POLR3DP05423 398 aaPredicted RBP17.23■□□□□ 0.35
LIG1-208ENST00000595758 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
LIG1-208ENST00000595758 SLC4A8Q2Y0W8 1093 aa17.23■□□□□ 0.35
LIG1-208ENST00000595758 ZKSCAN4Q969J2 545 aaPredicted RBP17.23■□□□□ 0.35
LIG1-208ENST00000595758 FAM227BQ96M60 508 aa17.23■□□□□ 0.35
LIG1-208ENST00000595758 TRIM34Q9BYJ4 488 aa17.23■□□□□ 0.35
LIG1-208ENST00000595758 HERC5Q9UII4 1024 aaKnown RBP17.23■□□□□ 0.35
LIG1-208ENST00000595758 FOCADQ5VW36 1801 aa17.22■□□□□ 0.35
LIG1-208ENST00000595758 FAM196BA6NMK8 535 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms