RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 WNK4Q96J92 1243 aa16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 ELP3Q9H9T3 547 aa16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 PIH1D3Q9NQM4 214 aaKnown RBP16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.24
TMEM38A-202ENST00000595452 CDK5RAP2Q96SN8 1893 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 GOLIM4O00461 696 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 WDHD1O75717 1129 aaPredicted RBP16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 RHBDL3P58872 404 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 VGLL4Q14135 290 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 MAGEB6Q8N7X4 407 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 GCC1Q96CN9 775 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 OPTNQ96CV9 577 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 TRIM34Q9BYJ4 488 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 ECHDC1Q9NTX5 307 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
TMEM38A-202ENST00000595452 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 PPP4CP60510 307 aa16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 ZSCAN25Q6NSZ9 544 aa16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 ERO1BQ86YB8 467 aa16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 ZNF384Q8TF68 577 aa16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 ZIC5Q96T25 663 aa16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 OSBPL5Q9H0X9 879 aaPredicted RBP16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
TMEM38A-202ENST00000595452 DOCK1Q14185 1865 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 SPDYE5A6NIY4 337 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 TRPA1O75762 1119 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 TM4SF4P48230 202 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 LRRFIP1Q32MZ4 808 aaKnown RBP16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 SLC9C2Q5TAH2 1124 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 MIGA2Q7L4E1 593 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 SH3RF3Q8TEJ3 882 aaPredicted RBP16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 HAUS7Q99871 368 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 BOLA2Q9H3K6 86 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 MYH1P12882 1939 aa16.55■□□□□ 0.24
TMEM38A-202ENST00000595452 ERC2O15083 957 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 HLA-DOAP06340 250 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 USP5P45974 858 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 GTF2A2P52657 109 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 TNS4Q8IZW8 715 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 RWDD1Q9H446 243 aaPredicted RBP16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 ANTXR1Q9H6X2 564 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 DDX4Q9NQI0 724 aaKnown RBP16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 RNF186Q9NXI6 227 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 HERC5Q9UII4 1024 aaKnown RBP16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 SUPT16HQ9Y5B9 1047 aaKnown RBP16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 NDUFB9Q9Y6M9 179 aa16.54■□□□□ 0.24
TMEM38A-202ENST00000595452 TTC41PQ6P2S7 1318 aa16.53■□□□□ 0.24
TMEM38A-202ENST00000595452 PPATQ06203 517 aa16.53■□□□□ 0.24
TMEM38A-202ENST00000595452 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
TMEM38A-202ENST00000595452 TSKSQ9UJT2 592 aa16.53■□□□□ 0.24
TMEM38A-202ENST00000595452 SNCAIPQ9Y6H5 919 aa16.53■□□□□ 0.24
TMEM38A-202ENST00000595452 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 FLT1P17948 1338 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 MAGEB6P1A0A0J9YX57 407 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 TBC1D12O60347 775 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 PDE6AP16499 860 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 PPIL2Q13356 520 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 NOL9Q5SY16 702 aaKnown RBP16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 COL13A1Q5TAT6 717 aaPredicted RBP16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 CRACR2BQ8N4Y2 399 aaPredicted RBP16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 MIGA1Q8NAN2 632 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 CRNKL1Q9BZJ0 848 aaKnown RBP16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 PI4KBQ9UBF8 816 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 ZNF112Q9UJU3 913 aa16.52■□□□□ 0.24
TMEM38A-202ENST00000595452 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
TMEM38A-202ENST00000595452 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 CETPP11597 493 aa16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 ADGRA1Q86SQ6 560 aa16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 IFNL1Q8IU54 200 aa16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 MAPKAPK5Q8IW41 473 aa16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 ZFPM1Q8IX07 1006 aa16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
TMEM38A-202ENST00000595452 ZNF532Q9HCE3 1301 aa16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 CCL15-CCL14A0A0B4J2E2 113 aa16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 CTNND1O60716 968 aaKnown RBP16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 GLRX3O76003 335 aaKnown RBP16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 INPP5BP32019 993 aa16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 CCL15Q16663 113 aa16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 AMOTL1Q8IY63 956 aa16.5■□□□□ 0.23
TMEM38A-202ENST00000595452 DYNLL1P63167 89 aaKnown RBP16.49■□□□□ 0.23
TMEM38A-202ENST00000595452 SH3BP5LQ7L8J4 393 aa16.49■□□□□ 0.23
TMEM38A-202ENST00000595452 TTC6Q86TZ1 520 aa16.49■□□□□ 0.23
TMEM38A-202ENST00000595452 CFHR5Q9BXR6 569 aa16.49■□□□□ 0.23
TMEM38A-202ENST00000595452 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
TMEM38A-202ENST00000595452 ZCCHC17Q9NP64 241 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms