RNA–Protein interactions for RNA: ENST00000593336.3

LINC01828-204, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-204ENST00000593336 USP16Q9Y5T5 823 aa6.99□□□□□ -1.29
LINC01828-204ENST00000593336 SOS1Q07889 1333 aaPredicted RBP6.99□□□□□ -1.29
LINC01828-204ENST00000593336 KCPQ6ZWJ8 1503 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 PTCD1O75127 700 aaKnown RBP6.98□□□□□ -1.29
LINC01828-204ENST00000593336 SNRPA1P09661 255 aaKnown RBP6.98□□□□□ -1.29
LINC01828-204ENST00000593336 VAC14Q08AM6 782 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 G2E3Q7L622 706 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 KRT27Q7Z3Y8 459 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 FMNL2Q96PY5 1086 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 SERTAD1Q9UHV2 236 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 NOB1Q9ULX3 412 aaKnown RBP6.98□□□□□ -1.29
LINC01828-204ENST00000593336 PCDHGA11Q9Y5H2 935 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 WNK3Q9BYP7 1800 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 TOGARAM1Q9Y4F4 1720 aa6.98□□□□□ -1.29
LINC01828-204ENST00000593336 RGS12O14924 1447 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 RLBP1P12271 317 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 EIF2S2P20042 333 aaKnown RBP6.97□□□□□ -1.29
LINC01828-204ENST00000593336 IRX6P78412 446 aaPredicted RBP6.97□□□□□ -1.29
LINC01828-204ENST00000593336 SEMA3FQ13275 785 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 PROSER3Q2NL68 480 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 LRP10Q7Z4F1 713 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 TTC5Q8N0Z6 440 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 SYTL4Q96C24 671 aaPredicted RBP6.97□□□□□ -1.29
LINC01828-204ENST00000593336 SMC4Q9NTJ3 1288 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 SCHIP1Q9P0W5 487 aaPredicted RBP6.97□□□□□ -1.29
LINC01828-204ENST00000593336 SIPA1L3O60292 1781 aaPredicted RBP6.97□□□□□ -1.29
LINC01828-204ENST00000593336 SCN11AQ9UI33 1791 aa6.97□□□□□ -1.29
LINC01828-204ENST00000593336 KDM3BQ7LBC6 1761 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 APBA3O96018 575 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 TEAD4Q15561 434 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 RSPO4Q2I0M5 234 aaPredicted RBP6.96□□□□□ -1.3
LINC01828-204ENST00000593336 HDGFL1Q5TGJ6 251 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 CCDC30Q5VVM6 783 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 BICDL1Q6ZP65 573 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 FAM196AQ6ZSG2 479 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 SYT9Q86SS6 491 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 DNAJC10Q8IXB1 793 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 ARHGAP45Q92619 1136 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 FRAT1Q92837 279 aaPredicted RBP6.96□□□□□ -1.3
LINC01828-204ENST00000593336 TNFRSF25Q93038 417 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 NACC1Q96RE7 527 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 PHAXQ9H814 394 aaKnown RBP6.96□□□□□ -1.3
LINC01828-204ENST00000593336 GDPD2Q9HCC8 539 aa6.96□□□□□ -1.3
LINC01828-204ENST00000593336 EML1O00423 815 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 ANXA1P04083 346 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 A1BGP04217 495 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 CYP19A1P11511 503 aaPredicted RBP6.95□□□□□ -1.3
LINC01828-204ENST00000593336 TRIM27P14373 513 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 ITPK1Q13572 414 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 PDE3AQ14432 1141 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 ZKSCAN2Q63HK3 967 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 ATF7IPQ6VMQ6 1270 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 PANK1Q8TE04 598 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 DDX21Q9NR30 783 aaKnown RBP eCLIP6.95□□□□□ -1.3
LINC01828-204ENST00000593336 CHPF2Q9P2E5 772 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 DBF4Q9UBU7 674 aaPredicted RBP6.95□□□□□ -1.3
LINC01828-204ENST00000593336 GTF3C3Q9Y5Q9 886 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 USP3Q9Y6I4 520 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 PALLDQ8WX93 1383 aa6.95□□□□□ -1.3
LINC01828-204ENST00000593336 PAPPAQ13219 1627 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 LOC102724428A0A0B4J2F2 783 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 TRIM37O94972 964 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 PIP4K2AP48426 406 aaPredicted RBP6.94□□□□□ -1.3
LINC01828-204ENST00000593336 KCNQ4P56696 695 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 SIK1P57059 783 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 FLIIQ13045 1269 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 EML3Q32P44 896 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 INTS5Q6P9B9 1019 aaKnown RBP6.94□□□□□ -1.3
LINC01828-204ENST00000593336 EXOC6Q8TAG9 804 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 SMARCC1Q92922 1105 aaPredicted RBP6.94□□□□□ -1.3
LINC01828-204ENST00000593336 CLUAP1Q96AJ1 413 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 TEX13AQ9BXU3 409 aaPredicted RBP6.94□□□□□ -1.3
LINC01828-204ENST00000593336 NOD1Q9Y239 953 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 KIF16BQ96L93 1317 aa6.94□□□□□ -1.3
LINC01828-204ENST00000593336 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
LINC01828-204ENST00000593336 F6X3S4 739 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 IPO8O15397 1037 aaKnown RBP6.93□□□□□ -1.3
LINC01828-204ENST00000593336 ABL2P42684 1182 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 EPHA4P54764 986 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 COL9A3Q14050 684 aaPredicted RBP6.93□□□□□ -1.3
LINC01828-204ENST00000593336 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
LINC01828-204ENST00000593336 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.93□□□□□ -1.3
LINC01828-204ENST00000593336 ZDHHC1Q8WTX9 485 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 C7orf43Q8WVR3 580 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 CRBNQ96SW2 442 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 STK31Q9BXU1 1019 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 TPSG1Q9NRR2 321 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 HYPKQ9NX55 129 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 ABCC4O15439 1325 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 PTPRCP08575 1304 aa6.93□□□□□ -1.3
LINC01828-204ENST00000593336 M0R082 166 aa6.92□□□□□ -1.3
LINC01828-204ENST00000593336 MYL6BP14649 208 aa6.92□□□□□ -1.3
LINC01828-204ENST00000593336 TXLNAP40222 546 aa6.92□□□□□ -1.3
LINC01828-204ENST00000593336 INTS3Q68E01 1043 aaKnown RBP6.92□□□□□ -1.3
LINC01828-204ENST00000593336 COPS6Q7L5N1 327 aa6.92□□□□□ -1.3
LINC01828-204ENST00000593336 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
LINC01828-204ENST00000593336 LINC00116Q8NCU8 138 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms