RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 COA7Q96BR5 231 aa12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 COL25A1Q9BXS0 654 aaPredicted RBP12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 SRCIN1Q9C0H9 1055 aa12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 ZMYND8Q9ULU4 1186 aaPredicted RBP12.75□□□□□ -0.37
SMCO4P1-201ENST00000592909 ATRNL1Q5VV63 1379 aa12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 UTYO14607 1347 aa12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 IFIT1P09914 478 aaKnown RBP12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 NBPF7P0C2Y1 421 aaPredicted RBP12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 MAP3K10Q02779 954 aa12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 USP40Q9NVE5 1235 aa12.74□□□□□ -0.37
SMCO4P1-201ENST00000592909 RPTORQ8N122 1335 aa12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 MAGEA10P43363 369 aaPredicted RBP12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 EXOSC9Q06265 439 aaKnown RBP12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 DIXDC1Q155Q3 683 aa12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 ZFPM1Q8IX07 1006 aa12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 ANKRD13CQ8N6S4 541 aa12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 TAOK2Q9UL54 1235 aa12.73□□□□□ -0.37
SMCO4P1-201ENST00000592909 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 ENTPD3O75355 529 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 HMGCRP04035 888 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 SYN1P17600 705 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 SLC4A10Q6U841 1118 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 ANKRD44Q8N8A2 993 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 IDI2Q9BXS1 227 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 BICC1Q9H694 974 aaKnown RBP12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 C11orf49Q9H6J7 331 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 HMX1Q9NP08 348 aaPredicted RBP12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 GJD2Q9UKL4 321 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
SMCO4P1-201ENST00000592909 CACNA1FO60840 1977 aa12.71□□□□□ -0.37
SMCO4P1-201ENST00000592909 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.71□□□□□ -0.37
SMCO4P1-201ENST00000592909 LPIN2Q92539 896 aa12.71□□□□□ -0.37
SMCO4P1-201ENST00000592909 UBE2OQ9C0C9 1292 aaKnown RBP12.71□□□□□ -0.37
SMCO4P1-201ENST00000592909 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
SMCO4P1-201ENST00000592909 OGDHLQ9ULD0 1010 aa12.71□□□□□ -0.37
SMCO4P1-201ENST00000592909 LRRFIP2Q9Y608 721 aaKnown RBP12.71□□□□□ -0.37
SMCO4P1-201ENST00000592909 TRIM75PA6NK02 468 aa12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 LDHBP07195 334 aaKnown RBP12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 SLC5A1P13866 664 aa12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 PRDX5P30044 214 aa12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 ZEB1P37275 1124 aaPredicted RBP12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 FAM109BQ6ICB4 259 aaPredicted RBP12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 SH3BP5LQ7L8J4 393 aa12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 KLHDC4Q8TBB5 520 aa12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 MGAMO43451 1857 aa12.7□□□□□ -0.38
SMCO4P1-201ENST00000592909 SALL1Q9NSC2 1324 aa12.69□□□□□ -0.38
SMCO4P1-201ENST00000592909 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
SMCO4P1-201ENST00000592909 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
SMCO4P1-201ENST00000592909 RGS3P49796 1198 aa12.69□□□□□ -0.38
SMCO4P1-201ENST00000592909 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
SMCO4P1-201ENST00000592909 SPINK5Q9NQ38 1064 aaPredicted RBP12.69□□□□□ -0.38
SMCO4P1-201ENST00000592909 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 EYA2O00167 538 aa12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 ZBTB22O15209 634 aa12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 TRIM32Q13049 653 aa12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 TREML2Q5T2D2 321 aa12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 MAP3K21Q5TCX8 1036 aa12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 ALPK3Q96L96 1907 aa12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 RFX7Q2KHR2 1363 aa12.68□□□□□ -0.38
SMCO4P1-201ENST00000592909 GAKO14976 1311 aa12.67□□□□□ -0.38
SMCO4P1-201ENST00000592909 PFASO15067 1338 aa12.67□□□□□ -0.38
SMCO4P1-201ENST00000592909 TBC1D12O60347 775 aa12.67□□□□□ -0.38
SMCO4P1-201ENST00000592909 COL6A1P12109 1028 aa12.67□□□□□ -0.38
SMCO4P1-201ENST00000592909 ZSCAN29Q8IWY8 852 aaPredicted RBP12.67□□□□□ -0.38
SMCO4P1-201ENST00000592909 GUCD1Q96NT3 240 aa12.67□□□□□ -0.38
SMCO4P1-201ENST00000592909 GNL3LQ9NVN8 582 aaKnown RBP12.67□□□□□ -0.38
SMCO4P1-201ENST00000592909 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 SEMA3EO15041 775 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 SLURP2P0DP57 97 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 XRCC5P13010 732 aaKnown RBP12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 RFX5P48382 616 aaPredicted RBP12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 CCDC184Q52MB2 194 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 CCDC84Q86UT8 332 aaPredicted RBP12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 TRIB2Q92519 343 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 FAM163AQ96GL9 167 aaPredicted RBP12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 TBC1D2Q9BYX2 928 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 MORF4L1Q9UBU8 362 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 DENND2AQ9ULE3 1009 aa12.66□□□□□ -0.38
SMCO4P1-201ENST00000592909 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
SMCO4P1-201ENST00000592909 SPP2Q13103 211 aa12.65□□□□□ -0.38
SMCO4P1-201ENST00000592909 ATG9AQ7Z3C6 839 aa12.65□□□□□ -0.38
SMCO4P1-201ENST00000592909 ZGPATQ8N5A5 531 aaKnown RBP12.65□□□□□ -0.38
SMCO4P1-201ENST00000592909 ZNF280CQ8ND82 737 aa12.65□□□□□ -0.38
SMCO4P1-201ENST00000592909 OSBPL5Q9H0X9 879 aaPredicted RBP12.65□□□□□ -0.38
SMCO4P1-201ENST00000592909 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
SMCO4P1-201ENST00000592909 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 CYP2B6P20813 491 aa12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 MDM2Q00987 491 aaPredicted RBP12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 SH3D19Q5HYK7 790 aa12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 SLF2Q8IX21 1173 aa12.64□□□□□ -0.39
SMCO4P1-201ENST00000592909 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms