RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SMCR8Q8TEV9 937 aaPredicted RBP24.5■■□□□ 1.51
PRKCSH-216ENST00000592445 DEFB118Q96PH6 123 aa24.5■■□□□ 1.51
PRKCSH-216ENST00000592445 TAOK2Q9UL54 1235 aa24.5■■□□□ 1.51
PRKCSH-216ENST00000592445 LRRFIP2Q9Y608 721 aaKnown RBP24.5■■□□□ 1.51
PRKCSH-216ENST00000592445 PTPRCP08575 1304 aa24.5■■□□□ 1.51
PRKCSH-216ENST00000592445 RFX5P48382 616 aaPredicted RBP24.49■■□□□ 1.51
PRKCSH-216ENST00000592445 RGS3P49796 1198 aa24.49■■□□□ 1.51
PRKCSH-216ENST00000592445 PXYLP1Q8TE99 480 aa24.49■■□□□ 1.51
PRKCSH-216ENST00000592445 AFG3L2Q9Y4W6 797 aa24.49■■□□□ 1.51
PRKCSH-216ENST00000592445 MGAMO43451 1857 aa24.49■■□□□ 1.51
PRKCSH-216ENST00000592445 A0A1W2PPC1 479 aa24.48■■□□□ 1.51
PRKCSH-216ENST00000592445 ATP2B3Q16720 1220 aa24.48■■□□□ 1.51
PRKCSH-216ENST00000592445 DENND2AQ9ULE3 1009 aa24.48■■□□□ 1.51
PRKCSH-216ENST00000592445 SLC45A1Q9Y2W3 748 aa24.48■■□□□ 1.51
PRKCSH-216ENST00000592445 DLL1O00548 723 aa24.47■■□□□ 1.51
PRKCSH-216ENST00000592445 ANP32CO43423 234 aa24.47■■□□□ 1.51
PRKCSH-216ENST00000592445 ENTPD3O75355 529 aa24.47■■□□□ 1.51
PRKCSH-216ENST00000592445 CAPN2P17655 700 aa24.47■■□□□ 1.51
PRKCSH-216ENST00000592445 ATG9AQ7Z3C6 839 aa24.47■■□□□ 1.51
PRKCSH-216ENST00000592445 SIL1Q9H173 461 aa24.47■■□□□ 1.51
PRKCSH-216ENST00000592445 ATRNL1Q5VV63 1379 aa24.46■■□□□ 1.51
PRKCSH-216ENST00000592445 SALL1Q9NSC2 1324 aa24.46■■□□□ 1.51
PRKCSH-216ENST00000592445 TRIM75PA6NK02 468 aa24.46■■□□□ 1.51
PRKCSH-216ENST00000592445 IRF5Q13568 498 aa24.46■■□□□ 1.51
PRKCSH-216ENST00000592445 IDI2Q9BXS1 227 aa24.46■■□□□ 1.51
PRKCSH-216ENST00000592445 CEP126Q9P2H0 1117 aa24.46■■□□□ 1.51
PRKCSH-216ENST00000592445 FAM9BQ8IZU0 186 aa24.45■■□□□ 1.5
PRKCSH-216ENST00000592445 COA7Q96BR5 231 aa24.45■■□□□ 1.5
PRKCSH-216ENST00000592445 STAP2Q9UGK3 403 aa24.45■■□□□ 1.5
PRKCSH-216ENST00000592445 SEMA3EO15041 775 aa24.44■■□□□ 1.5
PRKCSH-216ENST00000592445 CTNND1O60716 968 aaKnown RBP24.44■■□□□ 1.5
PRKCSH-216ENST00000592445 DZIP1Q86YF9 867 aaKnown RBP24.44■■□□□ 1.5
PRKCSH-216ENST00000592445 ZGPATQ8N5A5 531 aaKnown RBP24.44■■□□□ 1.5
PRKCSH-216ENST00000592445 ANKRD13CQ8N6S4 541 aa24.44■■□□□ 1.5
PRKCSH-216ENST00000592445 PAK6Q9NQU5 681 aaPredicted RBP24.44■■□□□ 1.5
PRKCSH-216ENST00000592445 DOCK2Q92608 1830 aa24.43■■□□□ 1.5
PRKCSH-216ENST00000592445 SOX1O00570 391 aaPredicted RBP24.43■■□□□ 1.5
PRKCSH-216ENST00000592445 PHKA1P46020 1223 aa24.43■■□□□ 1.5
PRKCSH-216ENST00000592445 SH3BP5LQ7L8J4 393 aa24.43■■□□□ 1.5
PRKCSH-216ENST00000592445 PAWRQ96IZ0 340 aaKnown RBP24.43■■□□□ 1.5
PRKCSH-216ENST00000592445 FBXO3Q9UK99 471 aa24.43■■□□□ 1.5
PRKCSH-216ENST00000592445 DDTLA6NHG4 134 aaPredicted RBP24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 CIAO1O76071 339 aa24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 PICALMQ13492 652 aa24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 NECAB2Q7Z6G3 386 aa24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 SLF2Q8IX21 1173 aa24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 LRCH3Q96II8 777 aa24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 AGTPBP1Q9UPW5 1226 aa24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 COL6A3P12111 3177 aa24.42■■□□□ 1.5
PRKCSH-216ENST00000592445 LAMA3Q16787 3333 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 GAKO14976 1311 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 SLURP2P0DP57 97 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 MAP3K10Q02779 954 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 SSH1Q8WYL5 1049 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 CRISPLD2Q9H0B8 497 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 ABCF2Q9UG63 623 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 PNMA3Q9UL41 463 aa24.41■■□□□ 1.5
PRKCSH-216ENST00000592445 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.4■■□□□ 1.53e-6■■■■□ 19.8
PRKCSH-216ENST00000592445 A0A0C4DFX4 3053 aa24.39■■□□□ 1.5
PRKCSH-216ENST00000592445 UBTFL1P0CB47 393 aaPredicted RBP24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 IL15P40933 162 aaPredicted RBP24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 BTDP43251 543 aa24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 TREML2Q5T2D2 321 aa24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 CCDC84Q86UT8 332 aaPredicted RBP24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 DIS3LQ8TF46 1054 aaKnown RBP24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 DDX4Q9NQI0 724 aaKnown RBP24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 RFX7Q2KHR2 1363 aa24.39■■□□□ 1.49
PRKCSH-216ENST00000592445 MYH2Q9UKX2 1941 aa24.38■■□□□ 1.49
PRKCSH-216ENST00000592445 ADORA1P30542 326 aa24.38■■□□□ 1.49
PRKCSH-216ENST00000592445 FAM110CQ1W6H9 321 aa24.38■■□□□ 1.49
PRKCSH-216ENST00000592445 CCDC102BQ68D86 513 aa24.38■■□□□ 1.49
PRKCSH-216ENST00000592445 DOCK1Q14185 1865 aa24.37■■□□□ 1.49
PRKCSH-216ENST00000592445 SPTY2D1Q68D10 685 aaPredicted RBP24.37■■□□□ 1.49
PRKCSH-216ENST00000592445 C7orf61Q8IZ16 206 aa24.37■■□□□ 1.49
PRKCSH-216ENST00000592445 ANKLE1Q8NAG6 615 aa24.36■■□□□ 1.49
PRKCSH-216ENST00000592445 PROCA1Q8NCQ7 364 aaPredicted RBP24.36■■□□□ 1.49
PRKCSH-216ENST00000592445 FAM163AQ96GL9 167 aaPredicted RBP24.36■■□□□ 1.49
PRKCSH-216ENST00000592445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.36■■□□□ 1.49
PRKCSH-216ENST00000592445 ZNF521Q96K83 1311 aa24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 PTPRFP10586 1907 aa24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 HMGCRP04035 888 aa24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 GCLCP48506 637 aaPredicted RBP24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 SPP2Q13103 211 aa24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 RASGRF1Q13972 1273 aa24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 ZMYND8Q9ULU4 1186 aaPredicted RBP24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 PA2G4Q9UQ80 394 aaKnown RBP24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 MROH7-TTC4A0A0A0MT08 1334 aa24.35■■□□□ 1.49
PRKCSH-216ENST00000592445 PHIPQ8WWQ0 1821 aa24.34■■□□□ 1.49
PRKCSH-216ENST00000592445 FAM196BA6NMK8 535 aa24.34■■□□□ 1.49
PRKCSH-216ENST00000592445 PABPC4Q13310 644 aaKnown RBP eCLIP24.34■■□□□ 1.49
PRKCSH-216ENST00000592445 ZBTB22O15209 634 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 TBC1D12O60347 775 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 BMP8BP34820 402 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 TIMM10P62072 90 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 ERICH6Q7L0X2 663 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 ZNF280CQ8ND82 737 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 GDF15Q99988 308 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 NBPF3Q9H094 633 aa24.33■■□□□ 1.49
PRKCSH-216ENST00000592445 HMX1Q9NP08 348 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms