RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ZNF394Q53GI3 561 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 SGO2Q562F6 1265 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 C9orf131Q5VYM1 1079 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 CDPF1Q6NVV7 123 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 LRFN4Q6PJG9 635 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 METTL16Q86W50 562 aaKnown RBP5.75□□□□□ -1.49
VMP1-212ENST00000591782 FAM20CQ8IXL6 584 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 JARID2Q92833 1246 aaPredicted RBP5.75□□□□□ -1.49
VMP1-212ENST00000591782 FANCD2OSQ96PS1 177 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 GSX1Q9H4S2 264 aaPredicted RBP5.75□□□□□ -1.49
VMP1-212ENST00000591782 FAM105AQ9NUU6 356 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 PCDHGB7Q9Y5F8 929 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 CSADQ9Y600 493 aa5.75□□□□□ -1.49
VMP1-212ENST00000591782 E9PSI1 815 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 RAB6AP20340 208 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 GARTP22102 1010 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 USP11P51784 963 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 RSPO4Q2I0M5 234 aaPredicted RBP5.74□□□□□ -1.49
VMP1-212ENST00000591782 NKAPLQ5M9Q1 402 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 SNAP47Q5SQN1 464 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 BNC2Q6ZN30 1099 aaPredicted RBP5.74□□□□□ -1.49
VMP1-212ENST00000591782 PRR23CQ6ZRP0 262 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 USP48Q86UV5 1035 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 C12orf40Q86WS4 652 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 GOLM1Q8NBJ4 401 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 ELMO3Q96BJ8 720 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 KCNF1Q9H3M0 494 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 DISC1Q9NRI5 854 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 HIF3AQ9Y2N7 669 aa5.74□□□□□ -1.49
VMP1-212ENST00000591782 F13A1P00488 732 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 MAP4P27816 1152 aaKnown RBP5.73□□□□□ -1.49
VMP1-212ENST00000591782 RXRBP28702 533 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 EIF4A3P38919 411 aaKnown RBP5.73□□□□□ -1.49
VMP1-212ENST00000591782 ERVK-24P63145 666 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 RACK1P63244 317 aaKnown RBP5.73□□□□□ -1.49
VMP1-212ENST00000591782 TTLL4Q14679 1199 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 PPM1JQ5JR12 505 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 WIPI1Q5MNZ9 446 aaPredicted RBP5.73□□□□□ -1.49
VMP1-212ENST00000591782 FBXL19Q6PCT2 694 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 FBLIM1Q8WUP2 373 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 PLPPR2Q96GM1 343 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 ATXN3LQ9H3M9 355 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 ADAMTS1Q9UHI8 967 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 RAXQ9Y2V3 346 aa5.73□□□□□ -1.49
VMP1-212ENST00000591782 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.72□□□□□ -1.49
VMP1-212ENST00000591782 PRAMEF27A3QJZ7 478 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 FAM221AA4D161 298 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 NEFMP07197 916 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 FURINP09958 794 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 HCLS1P14317 486 aaPredicted RBP5.72□□□□□ -1.49
VMP1-212ENST00000591782 TCF3P15923 654 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 RPL6Q02878 288 aaKnown RBP5.72□□□□□ -1.49
VMP1-212ENST00000591782 RING1Q06587 406 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 BEND4Q6ZU67 534 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 HDXQ7Z353 690 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 CCDC84Q86UT8 332 aaPredicted RBP5.72□□□□□ -1.49
VMP1-212ENST00000591782 NT5DC4Q86YG4 428 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 ZNF296Q8WUU4 475 aaPredicted RBP5.72□□□□□ -1.49
VMP1-212ENST00000591782 GATAD2BQ8WXI9 593 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 EZH1Q92800 747 aaPredicted RBP5.72□□□□□ -1.49
VMP1-212ENST00000591782 SEMA6CQ9H3T2 930 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 ACSS3Q9H6R3 686 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 PIDD1Q9HB75 910 aa5.72□□□□□ -1.49
VMP1-212ENST00000591782 HMX2A2RU54 273 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 GFRA2O00451 464 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 DYRK3O43781 588 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 RNGTTO60942 597 aaKnown RBP5.71□□□□□ -1.5
VMP1-212ENST00000591782 CILPO75339 1184 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 NFICP08651 508 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 H2AFB1P0C5Y9 115 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 H2AFB2P0C5Z0 115 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 NTF4P34130 210 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 NFKBIBQ15653 356 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 ZBTB37Q5TC79 503 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 CYFIP1Q7L576 1253 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 CLEC10AQ8IUN9 316 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 RNF214Q8ND24 703 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 FBXO27Q8NI29 283 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 YIPF2Q9BWQ6 316 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 LGR6Q9HBX8 967 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 KCNQ5Q9NR82 932 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 PICK1Q9NRD5 415 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 STOML1Q9UBI4 398 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 DDX41Q9UJV9 622 aaKnown RBP5.71□□□□□ -1.5
VMP1-212ENST00000591782 DAGLAQ9Y4D2 1042 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 SUPT16HQ9Y5B9 1047 aaKnown RBP5.71□□□□□ -1.5
VMP1-212ENST00000591782 SNCAIPQ9Y6H5 919 aa5.71□□□□□ -1.5
VMP1-212ENST00000591782 FAM95CA0A1B0GW59 222 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 GREM1O60565 184 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 BPNT1O95861 308 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 RAD51AP2Q09MP3 1159 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 FAM196AQ6ZSG2 479 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 SMYD4Q8IYR2 804 aaPredicted RBP5.7□□□□□ -1.5
VMP1-212ENST00000591782 ISL2Q96A47 359 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 FAM83CQ9BQN1 747 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 SPON2Q9BUD6 331 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 C7orf69Q9H7B7 122 aa5.7□□□□□ -1.5
VMP1-212ENST00000591782 TLR3O15455 904 aaKnown RBP5.69□□□□□ -1.5
VMP1-212ENST00000591782 DYNC1LI2O43237 492 aaPredicted RBP5.69□□□□□ -1.5
VMP1-212ENST00000591782 MPP2Q14168 576 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms