RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 C9orf131Q5VYM1 1079 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 B4GALNT3Q6L9W6 998 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 USP17L2Q6R6M4 530 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 USP17L1Q7RTZ2 530 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 PLEKHM2Q8IWE5 1019 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 NIM1KQ8IY84 436 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 ZNF687Q8N1G0 1237 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 TBC1D16Q8TBP0 767 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 SSH3Q8TE77 659 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 STK32AQ8WU08 396 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 EYA3Q99504 573 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 PRR14Q9BWN1 585 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 COPRSQ9NQ92 184 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.89□□□□□ -1.15
VPS4B-205ENST00000591383 MAP10Q9P2G4 905 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 POLLQ9UGP5 575 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 SCN9AQ15858 1988 aa7.89□□□□□ -1.15
VPS4B-205ENST00000591383 ZNF646O15015 1829 aaPredicted RBP7.89□□□□□ -1.15
VPS4B-205ENST00000591383 ZNF804BA4D1E1 1349 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 TK2O00142 265 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 SLC5A1P13866 664 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 TFCP2Q12800 502 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 ATP2B3Q16720 1220 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 ATG9AQ7Z3C6 839 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 SIRT2Q8IXJ6 389 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 RPAP2Q8IXW5 612 aaPredicted RBP7.88□□□□□ -1.15
VPS4B-205ENST00000591383 FAM174AQ8TBP5 190 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 THAP11Q96EK4 314 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 DBNDD1Q9H9R9 158 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 CEP126Q9P2H0 1117 aa7.88□□□□□ -1.15
VPS4B-205ENST00000591383 NOVA2Q9UNW9 492 aaKnown RBP7.88□□□□□ -1.15
VPS4B-205ENST00000591383 MAST2Q6P0Q8 1798 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 ZNF541Q9H0D2 1346 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 WTIPA6NIX2 430 aaPredicted RBP7.87□□□□□ -1.15
VPS4B-205ENST00000591383 USP17L5A8MUK1 530 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 ECE2O60344 883 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 IFIT1P09914 478 aaKnown RBP7.87□□□□□ -1.15
VPS4B-205ENST00000591383 JUNDP17535 347 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 PRELPP51888 382 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 KIAA2012Q0VF49 1180 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 PTPRNQ16849 979 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 ZNF804AQ7Z570 1209 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 VPS37DQ86XT2 251 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 ERC1Q8IUD2 1116 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 SCUBE3Q8IX30 993 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 VGLL2Q8N8G2 317 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 ZNF526Q8TF50 670 aaPredicted RBP7.87□□□□□ -1.15
VPS4B-205ENST00000591383 JDP2Q8WYK2 163 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 LEMD3Q9Y2U8 911 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 RIPOR2Q9Y4F9 1068 aa7.87□□□□□ -1.15
VPS4B-205ENST00000591383 PDE8BO95263 885 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 FMNL1O95466 1100 aaPredicted RBP7.86□□□□□ -1.15
VPS4B-205ENST00000591383 ADORA1P30542 326 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 GYG1P46976 350 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 AAMPQ13685 434 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 HSP90AB4PQ58FF6 505 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 GORABQ5T7V8 394 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 DEPDC4Q8N2C3 294 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 OTUD5Q96G74 571 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 RTFDC1Q9BY42 306 aaPredicted RBP7.86□□□□□ -1.15
VPS4B-205ENST00000591383 ZC3H12CQ9C0D7 883 aaKnown RBP7.86□□□□□ -1.15
VPS4B-205ENST00000591383 IL1RAPL2Q9NP60 686 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 IQSEC3Q9UPP2 1182 aaPredicted RBP7.86□□□□□ -1.15
VPS4B-205ENST00000591383 ADAMTSL1Q8N6G6 1762 aa7.86□□□□□ -1.15
VPS4B-205ENST00000591383 COL1A1P02452 1464 aaPredicted RBP7.86□□□□□ -1.15
VPS4B-205ENST00000591383 A0A1B0GUL7 405 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 FAM196BA6NMK8 535 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 SMARCA5O60264 1052 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-205ENST00000591383 FRAT2O75474 233 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-205ENST00000591383 RAD17O75943 681 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 SASH1O94885 1247 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 CTHP32929 405 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 APLP1P51693 650 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 CHAF1AQ13111 956 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-205ENST00000591383 UBE4AQ14139 1066 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 TNNI3KQ59H18 835 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 PHLDB3Q6NSJ2 640 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 AACSQ86V21 672 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 LPIN2Q92539 896 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 KIF1BPQ96EK5 621 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 NEUROD6Q96NK8 337 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 TLR7Q9NYK1 1049 aaKnown RBP7.85□□□□□ -1.15
VPS4B-205ENST00000591383 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
VPS4B-205ENST00000591383 JAG2Q9Y219 1238 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 AKAP2Q9Y2D5 859 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 GJA3Q9Y6H8 435 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.85□□□□□ -1.15
VPS4B-205ENST00000591383 FPGT-TNNI3KV9GXZ4 949 aa7.85□□□□□ -1.15
VPS4B-205ENST00000591383 YY1P25490 414 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 EMP3P54852 163 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 EIF6P56537 245 aaKnown RBP7.84□□□□□ -1.15
VPS4B-205ENST00000591383 PPP4CP60510 307 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 CRTC2Q53ET0 693 aaPredicted RBP7.84□□□□□ -1.15
VPS4B-205ENST00000591383 CAVIN4Q5BKX8 364 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 TXNRD3Q86VQ6 643 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 RHPN1Q8TCX5 695 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 LRRCC1Q9C099 1032 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 COA1Q9GZY4 146 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 RWDD1Q9H446 243 aaPredicted RBP7.84□□□□□ -1.15
VPS4B-205ENST00000591383 ZNRF3Q9ULT6 936 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms