RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 CCDC144CPQ8IYA2 1237 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 MYL10Q9BUA6 226 aa13.22□□□□□ -0.29
TPM4-213ENST00000591226 LIG1P18858 919 aa13.21□□□□□ -0.29
TPM4-213ENST00000591226 CDC27P30260 824 aa13.21□□□□□ -0.29
TPM4-213ENST00000591226 CRY2Q49AN0 593 aa13.21□□□□□ -0.29
TPM4-213ENST00000591226 ILDR1Q86SU0 546 aaPredicted RBP13.21□□□□□ -0.29
TPM4-213ENST00000591226 GPR101Q96P66 508 aaPredicted RBP13.21□□□□□ -0.29
TPM4-213ENST00000591226 ZKSCAN3Q9BRR0 538 aa13.21□□□□□ -0.29
TPM4-213ENST00000591226 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
TPM4-213ENST00000591226 MAST2Q6P0Q8 1798 aa13.21□□□□□ -0.29
TPM4-213ENST00000591226 XDHP47989 1333 aa13.21□□□□□ -0.29
TPM4-213ENST00000591226 ZBTB43O43298 467 aa13.21□□□□□ -0.3
TPM4-213ENST00000591226 LIFRP42702 1097 aa13.21□□□□□ -0.3
TPM4-213ENST00000591226 CEBPZQ03701 1054 aaKnown RBP13.21□□□□□ -0.3
TPM4-213ENST00000591226 RNF214Q8ND24 703 aa13.21□□□□□ -0.3
TPM4-213ENST00000591226 C8orf76Q96K31 380 aa13.21□□□□□ -0.3
TPM4-213ENST00000591226 GJB4Q9NTQ9 266 aa13.21□□□□□ -0.3
TPM4-213ENST00000591226 LEMD3Q9Y2U8 911 aa13.21□□□□□ -0.3
TPM4-213ENST00000591226 CYP2D7A0A087X1C5 515 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 PGBD1Q96JS3 809 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 RNF41Q9H4P4 317 aaPredicted RBP13.2□□□□□ -0.3
TPM4-213ENST00000591226 CFAP45Q9UL16 551 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 GOLGA8AA7E2F4 631 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 GPSM2P81274 684 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 AATFQ9NY61 560 aaKnown RBP eCLIP13.2□□□□□ -0.3
TPM4-213ENST00000591226 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
TPM4-213ENST00000591226 CCDC69A6NI79 296 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 POLRMTO00411 1230 aaKnown RBP13.19□□□□□ -0.3
TPM4-213ENST00000591226 GIMAP6Q6P9H5 292 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 FBXO18Q8NFZ0 1043 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 ANP32BQ92688 251 aaKnown RBP13.19□□□□□ -0.3
TPM4-213ENST00000591226 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 CCDC88AQ3V6T2 1871 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 LETM1O95202 739 aaPredicted RBP13.19□□□□□ -0.3
TPM4-213ENST00000591226 CCDC173Q0VFZ6 552 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 PHKBQ93100 1093 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 FAM217BQ9NTX9 383 aaPredicted RBP13.19□□□□□ -0.3
TPM4-213ENST00000591226 ECM29Q5VYK3 1845 aa13.19□□□□□ -0.3
TPM4-213ENST00000591226 CDKL5O76039 1030 aa13.18□□□□□ -0.3
TPM4-213ENST00000591226 RBM6P78332 1123 aaKnown RBP13.18□□□□□ -0.3
TPM4-213ENST00000591226 WTAPQ15007 396 aa13.18□□□□□ -0.3
TPM4-213ENST00000591226 SART3Q15020 963 aaKnown RBP13.18□□□□□ -0.3
TPM4-213ENST00000591226 ZNF827Q17R98 1081 aa13.18□□□□□ -0.3
TPM4-213ENST00000591226 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
TPM4-213ENST00000591226 DUOX1Q9NRD9 1551 aa13.18□□□□□ -0.3
TPM4-213ENST00000591226 NTRK3Q16288 839 aa13.18□□□□□ -0.3
TPM4-213ENST00000591226 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
TPM4-213ENST00000591226 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
TPM4-213ENST00000591226 PPP1R9BQ96SB3 815 aa13.18□□□□□ -0.3
TPM4-213ENST00000591226 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
TPM4-213ENST00000591226 UFL1O94874 794 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 EVX2Q03828 476 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 ZNF804AQ7Z570 1209 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 TDRD7Q8NHU6 1098 aaKnown RBP13.17□□□□□ -0.3
TPM4-213ENST00000591226 BICD2Q8TD16 824 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 ZNF396Q96N95 335 aaPredicted RBP13.17□□□□□ -0.3
TPM4-213ENST00000591226 CRNKL1Q9BZJ0 848 aaKnown RBP13.17□□□□□ -0.3
TPM4-213ENST00000591226 DACT1Q9NYF0 836 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 MYH2Q9UKX2 1941 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 ERICH2A1L162 156 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
TPM4-213ENST00000591226 ESR2Q92731 530 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 ALG1Q9BT22 464 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 RCOR1Q9UKL0 485 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 NID2Q14112 1375 aa13.17□□□□□ -0.3
TPM4-213ENST00000591226 KIF28PB7ZC32 967 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 USP17L12C9JPN9 530 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 USP17L21D6R901 530 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 GRIK5Q16478 980 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 ATL3Q6DD88 541 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 SYNE3Q6ZMZ3 975 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 WDR66Q8TBY9 1149 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 FUCA2Q9BTY2 467 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 NUP62CLQ9H1M0 184 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 PRDM1O75626 825 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 IARSP41252 1262 aaKnown RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 CAMK4Q16566 473 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 ZNF772Q68DY9 489 aaPredicted RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 C15orf52Q6ZUT6 534 aaKnown RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 TNKSO95271 1327 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 LAMB1P07942 1786 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 UBE2Q2LH0YL09 131 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 NR1I2O75469 434 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 POLR3DP05423 398 aaPredicted RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 KIF23Q02241 960 aaPredicted RBP13.16□□□□□ -0.3
TPM4-213ENST00000591226 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
TPM4-213ENST00000591226 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 APBA3O96018 575 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 CYP2D6P10635 497 aa13.15□□□□□ -0.3
TPM4-213ENST00000591226 ATP2B4P23634 1241 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms