RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 MFSD6Q6ZSS7 791 aa20.64■□□□□ 0.89
CXXC1-212ENST00000589940 AGBL3Q8NEM8 1001 aa20.64■□□□□ 0.89
CXXC1-212ENST00000589940 TMX3Q96JJ7 454 aa20.64■□□□□ 0.89
CXXC1-212ENST00000589940 RNF41Q9H4P4 317 aaPredicted RBP20.64■□□□□ 0.89
CXXC1-212ENST00000589940 CNNM2Q9H8M5 875 aa20.64■□□□□ 0.89
CXXC1-212ENST00000589940 LIMCH1Q9UPQ0 1083 aa20.64■□□□□ 0.89
CXXC1-212ENST00000589940 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 MAPKAPK5Q8IW41 473 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 ADAMTSL1Q8N6G6 1762 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 NEDD4P46934 1319 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 CYP2D7A0A087X1C5 515 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 MCM5P33992 734 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 TNIP1Q15025 636 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 USP40Q9NVE5 1235 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 FLT1P17948 1338 aa20.63■□□□□ 0.89
CXXC1-212ENST00000589940 RBM5P52756 815 aaKnown RBP eCLIP20.62■□□□□ 0.89
CXXC1-212ENST00000589940 TOB2Q14106 344 aaPredicted RBP20.62■□□□□ 0.89
CXXC1-212ENST00000589940 CDC42EP5Q6NZY7 148 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 KRT23Q9C075 422 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 ZBTB12Q9Y330 459 aaPredicted RBP20.62■□□□□ 0.89
CXXC1-212ENST00000589940 TACC3Q9Y6A5 838 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 HSP90AA1P07900 732 aaKnown RBP20.62■□□□□ 0.89
CXXC1-212ENST00000589940 USP17L8P0C7I0 530 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 Q6ZUG5 572 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 AMOTL1Q8IY63 956 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 SPRYD3Q8NCJ5 442 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 HDAC9Q9UKV0 1011 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 WDR19Q8NEZ3 1342 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 CDK5RAP2Q96SN8 1893 aa20.62■□□□□ 0.89
CXXC1-212ENST00000589940 NAV1Q8NEY1 1877 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 FZD9O00144 591 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 PCP11498 1178 aaKnown RBP20.61■□□□□ 0.89
CXXC1-212ENST00000589940 OGFOD1Q8N543 542 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 INCENPQ9NQS7 918 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 LAMB1P07942 1786 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 B4E1Z4 1266 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 SMIM22K7EJ46 135 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 PRC1O43663 620 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 WDHD1O75717 1129 aaPredicted RBP20.61■□□□□ 0.89
CXXC1-212ENST00000589940 FGD1P98174 961 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 CFAP100Q494V2 611 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 C12orf60Q5U649 245 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 FBXL16Q8N461 479 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 LARP6Q9BRS8 491 aaKnown RBP20.61■□□□□ 0.89
CXXC1-212ENST00000589940 LRRC2Q9BYS8 371 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 AGXT2Q9BYV1 514 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 PCDHAC2Q9Y5I4 1007 aa20.61■□□□□ 0.89
CXXC1-212ENST00000589940 SLC3A2P08195 630 aaKnown RBP20.6■□□□□ 0.89
CXXC1-212ENST00000589940 CYP2D6P10635 497 aa20.6■□□□□ 0.89
CXXC1-212ENST00000589940 ANTXR2P58335 489 aa20.6■□□□□ 0.89
CXXC1-212ENST00000589940 CHST3Q7LGC8 479 aa20.6■□□□□ 0.89
CXXC1-212ENST00000589940 ZSCAN31Q96LW9 406 aaPredicted RBP20.6■□□□□ 0.89
CXXC1-212ENST00000589940 FGRP09769 529 aa20.59■□□□□ 0.89
CXXC1-212ENST00000589940 LMNB1P20700 586 aa20.59■□□□□ 0.89
CXXC1-212ENST00000589940 EIF6P56537 245 aaKnown RBP20.59■□□□□ 0.89
CXXC1-212ENST00000589940 STK11IPQ8N1F8 1099 aa20.59■□□□□ 0.89
CXXC1-212ENST00000589940 FOCADQ5VW36 1801 aa20.59■□□□□ 0.89
CXXC1-212ENST00000589940 DDX60LQ5H9U9 1706 aaKnown RBP20.59■□□□□ 0.89
CXXC1-212ENST00000589940 CUL4AQ13619 759 aa20.59■□□□□ 0.89
CXXC1-212ENST00000589940 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
CXXC1-212ENST00000589940 TOMM22Q9NS69 142 aa20.59■□□□□ 0.89
CXXC1-212ENST00000589940 SAP30BPQ9UHR5 308 aaKnown RBP20.59■□□□□ 0.89
CXXC1-212ENST00000589940 TPCN1Q9ULQ1 816 aa20.59■□□□□ 0.89
CXXC1-212ENST00000589940 ROBO3Q96MS0 1386 aa20.58■□□□□ 0.89
CXXC1-212ENST00000589940 POLR3DP05423 398 aaPredicted RBP20.58■□□□□ 0.89
CXXC1-212ENST00000589940 EVX2Q03828 476 aa20.58■□□□□ 0.89
CXXC1-212ENST00000589940 CYB5R4Q7L1T6 521 aa20.58■□□□□ 0.89
CXXC1-212ENST00000589940 NKX2-3Q8TAU0 364 aa20.58■□□□□ 0.89
CXXC1-212ENST00000589940 BRF1Q92994 677 aa20.58■□□□□ 0.89
CXXC1-212ENST00000589940 KDM4AO75164 1064 aa20.58■□□□□ 0.88
CXXC1-212ENST00000589940 YBX3P16989 372 aaKnown RBP eCLIP20.58■□□□□ 0.88
CXXC1-212ENST00000589940 RPS12P25398 132 aaKnown RBP20.58■□□□□ 0.88
CXXC1-212ENST00000589940 PICALMQ13492 652 aa20.58■□□□□ 0.88
CXXC1-212ENST00000589940 RRP12Q5JTH9 1297 aaKnown RBP20.58■□□□□ 0.88
CXXC1-212ENST00000589940 SLKQ9H2G2 1235 aaPredicted RBP20.58■□□□□ 0.88
CXXC1-212ENST00000589940 DDX4Q9NQI0 724 aaKnown RBP20.58■□□□□ 0.88
CXXC1-212ENST00000589940 MMP14P50281 582 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 PDE4BQ07343 736 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 SLC4A8Q2Y0W8 1093 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 ZSWIM5Q9P217 1185 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.57■□□□□ 0.88
CXXC1-212ENST00000589940 SPDYE2BA6NHP3 402 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 ORC4O43929 436 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 LARGE1O95461 756 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 SPDYE6P0CI01 402 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 ME3Q16798 604 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 ESR2Q92731 530 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 PRMT6Q96LA8 375 aaPredicted RBP20.57■□□□□ 0.88
CXXC1-212ENST00000589940 IDI2Q9BXS1 227 aa20.57■□□□□ 0.88
CXXC1-212ENST00000589940 PLCD1P51178 756 aa20.56■□□□□ 0.88
CXXC1-212ENST00000589940 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
CXXC1-212ENST00000589940 TMEM87BQ96K49 555 aa20.56■□□□□ 0.88
CXXC1-212ENST00000589940 FOXD4L1Q9NU39 408 aa20.56■□□□□ 0.88
CXXC1-212ENST00000589940 ECM29Q5VYK3 1845 aa20.56■□□□□ 0.88
CXXC1-212ENST00000589940 NFIAQ12857 509 aa20.55■□□□□ 0.88
CXXC1-212ENST00000589940 MTMR14Q8NCE2 650 aa20.55■□□□□ 0.88
CXXC1-212ENST00000589940 INTS4Q96HW7 963 aaKnown RBP20.55■□□□□ 0.88
CXXC1-212ENST00000589940 OSBPL5Q9H0X9 879 aaPredicted RBP20.55■□□□□ 0.88
CXXC1-212ENST00000589940 NPM3O75607 178 aaKnown RBP20.55■□□□□ 0.88
CXXC1-212ENST00000589940 PRDM1O75626 825 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms