RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 RALGAPBQ86X10 1494 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 GLI3P10071 1580 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 SPHKAPQ2M3C7 1700 aa7.66□□□□□ -1.18
SMAD4-208ENST00000589706 RGS20O76081 388 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 HOXD8P13378 290 aaPredicted RBP7.65□□□□□ -1.18
SMAD4-208ENST00000589706 PTSQ03393 145 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 MAP3K11Q16584 847 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 PKDCCQ504Y2 493 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 CRIPAKQ8N1N5 446 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 CEP120Q8N960 986 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMAD4-208ENST00000589706 PTPRUQ92729 1446 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 BHMTQ93088 406 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 SLC30A3Q99726 388 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 CEP44Q9C0F1 390 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 DZANK1Q9NVP4 752 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 HCN2Q9UL51 889 aa7.65□□□□□ -1.18
SMAD4-208ENST00000589706 NOS1P29475 1434 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 CEP162Q5TB80 1403 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 SOBPA7XYQ1 873 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 TRPA1O75762 1119 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 DBN1Q16643 649 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 TPTE2Q6XPS3 522 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 DHX32Q7L7V1 743 aaKnown RBP7.64□□□□□ -1.19
SMAD4-208ENST00000589706 ZNF296Q8WUU4 475 aaPredicted RBP7.64□□□□□ -1.19
SMAD4-208ENST00000589706 ABHD17AQ96GS6 310 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 EAF1Q96JC9 268 aaPredicted RBP7.64□□□□□ -1.19
SMAD4-208ENST00000589706 SPACA7Q96KW9 195 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 MYO5BQ9ULV0 1848 aa7.64□□□□□ -1.19
SMAD4-208ENST00000589706 COL22A1Q8NFW1 1626 aaPredicted RBP7.63□□□□□ -1.19
SMAD4-208ENST00000589706 DUOX2Q9NRD8 1548 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 KANK1Q14678 1352 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 GRIA4P48058 902 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 SPRED3Q2MJR0 410 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 TAF7LQ5H9L4 462 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 TRIM22Q8IYM9 498 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 PHC3Q8NDX5 983 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 NSUN5Q96P11 429 aaKnown RBP7.63□□□□□ -1.19
SMAD4-208ENST00000589706 ORAI2Q96SN7 254 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 ZSWIM4Q9H7M6 989 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 ATP13A2Q9NQ11 1180 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 MARF1Q9Y4F3 1742 aaKnown RBP7.63□□□□□ -1.19
SMAD4-208ENST00000589706 LAMC1P11047 1609 aa7.63□□□□□ -1.19
SMAD4-208ENST00000589706 TRPM2O94759 1503 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 EHBP1L1Q8N3D4 1523 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 MYOM2P54296 1465 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 METTL12A8MUP2 240 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 NFKBIEO00221 500 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 SSBP05455 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 CELA3AP09093 270 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 CD33P20138 364 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 ITPKAP23677 461 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 NASPP49321 788 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 LIG3P49916 1009 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 NRLP54845 237 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 EZH2Q15910 746 aaKnown RBP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 FBXL19Q6PCT2 694 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 RAB44Q7Z6P3 723 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 TMEM102Q8N9M5 508 aaPredicted RBP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 NXPE3Q969Y0 559 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 GMCL1Q96IK5 515 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 RHOVQ96L33 236 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 NT5C1AQ9BXI3 368 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 OSBPL2Q9H1P3 480 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 KCNQ5Q9NR82 932 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 EFR3BQ9Y2G0 817 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 TMA7Q9Y2S6 64 aaKnown RBP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 NOP58Q9Y2X3 529 aaKnown RBP7.62□□□□□ -1.19
SMAD4-208ENST00000589706 C1orf167Q5SNV9 1468 aa7.62□□□□□ -1.19
SMAD4-208ENST00000589706 A0A096LPE4 126 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 LOC102724428A0A0B4J2F2 783 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 A0A1W2PPZ6 126 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 TLDC2A0PJX2 215 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 PF4P02776 101 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 SIK1P57059 783 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 FAM160A1Q05DH4 1040 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 CKAP2LQ8IYA6 745 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 CCDC155Q8N6L0 562 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 NECAB3Q96P71 396 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-208ENST00000589706 HHIPQ96QV1 700 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 BHLHE41Q9C0J9 482 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-208ENST00000589706 PIF1Q9H611 641 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 RRP7BPQ9NSQ0 103 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 GINM1Q9NU53 330 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 ATXN7L1Q9ULK2 861 aaPredicted RBP7.61□□□□□ -1.19
SMAD4-208ENST00000589706 TLR6Q9Y2C9 796 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 ADGRL3Q9HAR2 1447 aa7.61□□□□□ -1.19
SMAD4-208ENST00000589706 CAMTA1Q9Y6Y1 1673 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 NINLQ9Y2I6 1382 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 GARTP22102 1010 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 GPLD1P80108 840 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 LMNB2Q03252 620 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 NFX1Q12986 1120 aaKnown RBP7.6□□□□□ -1.19
SMAD4-208ENST00000589706 CAMK2GQ13555 558 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-208ENST00000589706 COL9A2Q14055 689 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-208ENST00000589706 VPS72Q15906 364 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 RPS26P11Q5JNZ5 115 aaPredicted RBP7.6□□□□□ -1.19
SMAD4-208ENST00000589706 TRPM4Q8TD43 1214 aa7.6□□□□□ -1.19
SMAD4-208ENST00000589706 SPON1Q9HCB6 807 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms