RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 LAS1LQ9Y4W2 734 aaKnown RBP7.84□□□□□ -1.15
VPS25-204ENST00000589577 ATAD5Q96QE3 1844 aa7.84□□□□□ -1.15
VPS25-204ENST00000589577 USP34Q70CQ2 3546 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 PLXNA1Q9UIW2 1896 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 CFAP54Q96N23 3096 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 NEURL1BA8MQ27 555 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 GYG1P46976 350 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 POTEEQ6S8J3 1075 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 GADL1Q6ZQY3 521 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 ALYREFQ86V81 257 aaKnown RBP7.83□□□□□ -1.16
VPS25-204ENST00000589577 SMCR8Q8TEV9 937 aaPredicted RBP7.83□□□□□ -1.16
VPS25-204ENST00000589577 HOOK2Q96ED9 719 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 ZDHHC15Q96MV8 337 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 C1QTNF1Q9BXJ1 281 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 THEGQ9P2T0 379 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 TRIM35Q9UPQ4 493 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 AFG3L2Q9Y4W6 797 aa7.83□□□□□ -1.16
VPS25-204ENST00000589577 PHF20L1A8MW92 1017 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 PTPRAP18433 802 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 CCND3P30281 292 aaPredicted RBP7.82□□□□□ -1.16
VPS25-204ENST00000589577 HDLBPQ00341 1268 aaKnown RBP7.82□□□□□ -1.16
VPS25-204ENST00000589577 CACNB2Q08289 660 aaPredicted RBP7.82□□□□□ -1.16
VPS25-204ENST00000589577 LMOD3Q0VAK6 560 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 TREML2Q5T2D2 321 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 FASTKD5Q7L8L6 764 aaKnown RBP7.82□□□□□ -1.16
VPS25-204ENST00000589577 GBF1Q92538 1859 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 TEKT1Q969V4 418 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.82□□□□□ -1.16
VPS25-204ENST00000589577 HCN4Q9Y3Q4 1203 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 DAGLAQ9Y4D2 1042 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 ZHX2Q9Y6X8 837 aa7.82□□□□□ -1.16
VPS25-204ENST00000589577 PI4KAP2A4QPH2 592 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 ATN1P54259 1190 aaPredicted RBP7.81□□□□□ -1.16
VPS25-204ENST00000589577 EPHB4P54760 987 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 MRPS5P82675 430 aaKnown RBP7.81□□□□□ -1.16
VPS25-204ENST00000589577 NFIAQ12857 509 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 PI4KAP1Q8N8J0 262 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 FAM151AQ8WW52 585 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 BADQ92934 168 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 FAM84BQ96KN1 310 aaPredicted RBP7.81□□□□□ -1.16
VPS25-204ENST00000589577 SENP6Q9GZR1 1112 aaPredicted RBP7.81□□□□□ -1.16
VPS25-204ENST00000589577 EPHX3Q9H6B9 360 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 C11orf16Q9NQ32 467 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 MBIPQ9NS73 344 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 AGTPBP1Q9UPW5 1226 aa7.81□□□□□ -1.16
VPS25-204ENST00000589577 ANKRD18BA2A2Z9 1011 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 SLURP2P0DP57 97 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 CYP2B6P20813 491 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 DNAJB2P25686 324 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 RTP1P59025 263 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 TCP10Q12799 353 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 CCL14Q16627 93 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 KSR2Q6VAB6 950 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 CCDC84Q86UT8 332 aaPredicted RBP7.8□□□□□ -1.16
VPS25-204ENST00000589577 SCYL3Q8IZE3 742 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 PPM1EQ8WY54 764 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 PNNQ9H307 717 aaKnown RBP7.8□□□□□ -1.16
VPS25-204ENST00000589577 TMOD2Q9NZR1 351 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 IQSEC3Q9UPP2 1182 aaPredicted RBP7.8□□□□□ -1.16
VPS25-204ENST00000589577 LRRC37A2A6NM11 1700 aa7.8□□□□□ -1.16
VPS25-204ENST00000589577 TRIM43BA6NCK2 446 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 TRIM75PA6NK02 468 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 ELL2O00472 640 aaPredicted RBP7.79□□□□□ -1.16
VPS25-204ENST00000589577 PLIN1O60240 522 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 PEX10O60683 326 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 DDX58O95786 925 aaKnown RBP7.79□□□□□ -1.16
VPS25-204ENST00000589577 XRCC5P13010 732 aaKnown RBP7.79□□□□□ -1.16
VPS25-204ENST00000589577 BMP1P13497 986 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 ITGB8P26012 769 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 HIBADHP31937 336 aaKnown RBP7.79□□□□□ -1.16
VPS25-204ENST00000589577 FOXO4P98177 505 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 ADGRE1Q14246 886 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 GCKRQ14397 625 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 NEUROD2Q15784 382 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 AKNAD1Q5T1N1 836 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 SH3RF1Q7Z6J0 888 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 ZFPM1Q8IX07 1006 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 USP6NLQ92738 828 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 TRIM43Q96BQ3 446 aaPredicted RBP7.79□□□□□ -1.16
VPS25-204ENST00000589577 ZNF594Q96JF6 807 aaPredicted RBP7.79□□□□□ -1.16
VPS25-204ENST00000589577 MRIQ9BWK5 157 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 ZNF576Q9H609 170 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 PDLIM7Q9NR12 457 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 FAM198AQ9UFP1 575 aa7.79□□□□□ -1.16
VPS25-204ENST00000589577 C5orf42Q9H799 3197 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 ZNF853P0CG23 659 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 CHAF1AQ13111 956 aaPredicted RBP7.78□□□□□ -1.16
VPS25-204ENST00000589577 PDE3AQ14432 1141 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 HHIPL2Q6UWX4 724 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 C8orf58Q8NAV2 365 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 KHSRPQ92945 711 aaKnown RBP eCLIP7.78□□□□□ -1.16
VPS25-204ENST00000589577 RNPC3Q96LT9 517 aaKnown RBP7.78□□□□□ -1.16
VPS25-204ENST00000589577 MORF4L1Q9UBU8 362 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 PRKAG2Q9UGJ0 569 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 ATP11BQ9Y2G3 1177 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 RFX7Q2KHR2 1363 aa7.78□□□□□ -1.16
VPS25-204ENST00000589577 ZKSCAN1P17029 563 aaPredicted RBP7.77□□□□□ -1.17
VPS25-204ENST00000589577 GCLCP48506 637 aaPredicted RBP7.77□□□□□ -1.17
VPS25-204ENST00000589577 MRE11P49959 708 aa7.77□□□□□ -1.17
VPS25-204ENST00000589577 KCNQ1P51787 676 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms