RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PRRT2Q7Z6L0 340 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-211ENST00000589528 ZGPATQ8N5A5 531 aaKnown RBP18.97■□□□□ 0.63
ACTN4-211ENST00000589528 TAOK2Q9UL54 1235 aa18.97■□□□□ 0.63
ACTN4-211ENST00000589528 RANBP2P49792 3224 aaKnown RBP18.97■□□□□ 0.63
ACTN4-211ENST00000589528 TNPO2O14787 897 aaKnown RBP18.96■□□□□ 0.63
ACTN4-211ENST00000589528 EVI5O60447 810 aa18.96■□□□□ 0.63
ACTN4-211ENST00000589528 TFRCP02786 760 aaKnown RBP18.96■□□□□ 0.63
ACTN4-211ENST00000589528 PTPRAP18433 802 aa18.96■□□□□ 0.63
ACTN4-211ENST00000589528 RFX5P48382 616 aaPredicted RBP18.96■□□□□ 0.63
ACTN4-211ENST00000589528 ATG9AQ7Z3C6 839 aa18.96■□□□□ 0.63
ACTN4-211ENST00000589528 DZIP1Q86YF9 867 aaKnown RBP18.96■□□□□ 0.63
ACTN4-211ENST00000589528 ZFPM1Q8IX07 1006 aa18.96■□□□□ 0.63
ACTN4-211ENST00000589528 SALL1Q9NSC2 1324 aa18.96■□□□□ 0.63
ACTN4-211ENST00000589528 SEMA3EO15041 775 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 ENTPD3O75355 529 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 SGPL1O95470 568 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 UBTFL1P0CB47 393 aaPredicted RBP18.95■□□□□ 0.62
ACTN4-211ENST00000589528 FLT3LGP49771 235 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 UBE2Q1Q7Z7E8 422 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 SLF2Q8IX21 1173 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 FBXO3Q9UK99 471 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 SLC45A1Q9Y2W3 748 aa18.95■□□□□ 0.62
ACTN4-211ENST00000589528 TRIM75PA6NK02 468 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 PHF20L1A8MW92 1017 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 CIAO1O76071 339 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 INHAP05111 366 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 ELNP15502 786 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 PHKA1P46020 1223 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 SSH1Q8WYL5 1049 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 COA7Q96BR5 231 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 IDI2Q9BXS1 227 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 ABCF2Q9UG63 623 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 AFG3L2Q9Y4W6 797 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 PHIPQ8WWQ0 1821 aa18.94■□□□□ 0.62
ACTN4-211ENST00000589528 ZBTB7BO15156 539 aaPredicted RBP18.93■□□□□ 0.62
ACTN4-211ENST00000589528 PICALMQ13492 652 aa18.93■□□□□ 0.62
ACTN4-211ENST00000589528 PXYLP1Q8TE99 480 aa18.93■□□□□ 0.62
ACTN4-211ENST00000589528 CTNND1O60716 968 aaKnown RBP18.92■□□□□ 0.62
ACTN4-211ENST00000589528 CAPN2P17655 700 aa18.92■□□□□ 0.62
ACTN4-211ENST00000589528 IL15P40933 162 aaPredicted RBP18.92■□□□□ 0.62
ACTN4-211ENST00000589528 DEFB118Q96PH6 123 aa18.92■□□□□ 0.62
ACTN4-211ENST00000589528 PNMA3Q9UL41 463 aa18.92■□□□□ 0.62
ACTN4-211ENST00000589528 HDAC5Q9UQL6 1122 aa18.92■□□□□ 0.62
ACTN4-211ENST00000589528 ATRNL1Q5VV63 1379 aa18.92■□□□□ 0.62
ACTN4-211ENST00000589528 E9PSI1 815 aa18.91■□□□□ 0.62
ACTN4-211ENST00000589528 IRF5Q13568 498 aa18.91■□□□□ 0.62
ACTN4-211ENST00000589528 SPTY2D1Q68D10 685 aaPredicted RBP18.91■□□□□ 0.62
ACTN4-211ENST00000589528 CCDC102BQ68D86 513 aa18.91■□□□□ 0.62
ACTN4-211ENST00000589528 ANKRD13CQ8N6S4 541 aa18.91■□□□□ 0.62
ACTN4-211ENST00000589528 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
ACTN4-211ENST00000589528 ZNF521Q96K83 1311 aa18.91■□□□□ 0.62
ACTN4-211ENST00000589528 A0A1W2PPC1 479 aa18.9■□□□□ 0.62
ACTN4-211ENST00000589528 DDTLA6NHG4 134 aaPredicted RBP18.9■□□□□ 0.62
ACTN4-211ENST00000589528 BTDP43251 543 aa18.9■□□□□ 0.62
ACTN4-211ENST00000589528 AGTPBP1Q9UPW5 1226 aa18.9■□□□□ 0.62
ACTN4-211ENST00000589528 GAKO14976 1311 aa18.9■□□□□ 0.62
ACTN4-211ENST00000589528 ATAD5Q96QE3 1844 aa18.9■□□□□ 0.62
ACTN4-211ENST00000589528 ALDH1L2Q3SY69 923 aa18.89■□□□□ 0.61
ACTN4-211ENST00000589528 SH3BP5LQ7L8J4 393 aa18.89■□□□□ 0.61
ACTN4-211ENST00000589528 SLC17A8Q8NDX2 589 aa18.89■□□□□ 0.61
ACTN4-211ENST00000589528 PRO3102Q9H379 93 aa18.89■□□□□ 0.61
ACTN4-211ENST00000589528 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.89■□□□□ 0.611e-7■■■■□ 20.4
ACTN4-211ENST00000589528 ALPK3Q96L96 1907 aa18.88■□□□□ 0.61
ACTN4-211ENST00000589528 ADORA1P30542 326 aa18.88■□□□□ 0.61
ACTN4-211ENST00000589528 RASGRF1Q13972 1273 aa18.88■□□□□ 0.61
ACTN4-211ENST00000589528 DDX4Q9NQI0 724 aaKnown RBP18.88■□□□□ 0.61
ACTN4-211ENST00000589528 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.88■□□□□ 0.61
ACTN4-211ENST00000589528 PA2G4Q9UQ80 394 aaKnown RBP18.88■□□□□ 0.61
ACTN4-211ENST00000589528 MROH7-TTC4A0A0A0MT08 1334 aa18.87■□□□□ 0.61
ACTN4-211ENST00000589528 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
ACTN4-211ENST00000589528 FAM110CQ1W6H9 321 aa18.87■□□□□ 0.61
ACTN4-211ENST00000589528 RFX7Q2KHR2 1363 aa18.87■□□□□ 0.61
ACTN4-211ENST00000589528 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
ACTN4-211ENST00000589528 NECAB2Q7Z6G3 386 aa18.87■□□□□ 0.61
ACTN4-211ENST00000589528 CCDC84Q86UT8 332 aaPredicted RBP18.87■□□□□ 0.61
ACTN4-211ENST00000589528 PAWRQ96IZ0 340 aaKnown RBP18.87■□□□□ 0.61
ACTN4-211ENST00000589528 PAK6Q9NQU5 681 aaPredicted RBP18.87■□□□□ 0.61
ACTN4-211ENST00000589528 SLURP2P0DP57 97 aa18.86■□□□□ 0.61
ACTN4-211ENST00000589528 PABPC4Q13310 644 aaKnown RBP eCLIP18.86■□□□□ 0.611e-10■■■□□ 16.5
ACTN4-211ENST00000589528 TREML2Q5T2D2 321 aa18.86■□□□□ 0.61
ACTN4-211ENST00000589528 PROCA1Q8NCQ7 364 aaPredicted RBP18.86■□□□□ 0.61
ACTN4-211ENST00000589528 FAM163AQ96GL9 167 aaPredicted RBP18.86■□□□□ 0.61
ACTN4-211ENST00000589528 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.86■□□□□ 0.611e-7■■■■■ 28.5
ACTN4-211ENST00000589528 STAP2Q9UGK3 403 aa18.86■□□□□ 0.61
ACTN4-211ENST00000589528 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
ACTN4-211ENST00000589528 PDS5AQ29RF7 1337 aaKnown RBP18.85■□□□□ 0.61
ACTN4-211ENST00000589528 HMGCRP04035 888 aa18.85■□□□□ 0.61
ACTN4-211ENST00000589528 GCLCP48506 637 aaPredicted RBP18.85■□□□□ 0.61
ACTN4-211ENST00000589528 TIMM10P62072 90 aa18.85■□□□□ 0.61
ACTN4-211ENST00000589528 OSBPL5Q9H0X9 879 aaPredicted RBP18.85■□□□□ 0.61
ACTN4-211ENST00000589528 AKAP2Q9Y2D5 859 aa18.85■□□□□ 0.61
ACTN4-211ENST00000589528 LAMA3Q16787 3333 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 FAM196BA6NMK8 535 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 TBC1D12O60347 775 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 GSTO1P78417 241 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 MECOMQ03112 1051 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 SPP2Q13103 211 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 MVPQ14764 893 aaKnown RBP18.84■□□□□ 0.61
ACTN4-211ENST00000589528 C7orf61Q8IZ16 206 aa18.84■□□□□ 0.61
ACTN4-211ENST00000589528 TBC1D2Q9BYX2 928 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms