RNA–Protein interactions for RNA: ENST00000589466.1

LINC00906-204, long intergenic non-protein coding RNA 906, humanhuman

TSL 3

Gene LINC00906, Length 403 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00906-204ENST00000589466 NLRP3Q96P20 1036 aa7.85□□□□□ -1.15
LINC00906-204ENST00000589466 TSEN34Q9BSV6 310 aaKnown RBP7.85□□□□□ -1.15
LINC00906-204ENST00000589466 CHMP4AQ9BY43 222 aa7.85□□□□□ -1.15
LINC00906-204ENST00000589466 TNNQ9UQP3 1299 aa7.85□□□□□ -1.15
LINC00906-204ENST00000589466 MAP4K5Q9Y4K4 846 aa7.85□□□□□ -1.15
LINC00906-204ENST00000589466 SNED1Q8TER0 1413 aa7.85□□□□□ -1.15
LINC00906-204ENST00000589466 DDX60Q8IY21 1712 aaKnown RBP7.84□□□□□ -1.15
LINC00906-204ENST00000589466 TTLL8A6PVC2 850 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 RARSP54136 660 aaKnown RBP7.84□□□□□ -1.15
LINC00906-204ENST00000589466 MFAP1P55081 439 aaKnown RBP7.84□□□□□ -1.15
LINC00906-204ENST00000589466 CASP7P55210 303 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.84□□□□□ -1.15
LINC00906-204ENST00000589466 CCDC116Q8IYX3 515 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 LINS1Q8NG48 757 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 WHAMMQ8TF30 809 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 CELF1Q92879 486 aaKnown RBP7.84□□□□□ -1.15
LINC00906-204ENST00000589466 RBM17Q96I25 401 aaKnown RBP7.84□□□□□ -1.15
LINC00906-204ENST00000589466 COL25A1Q9BXS0 654 aaPredicted RBP7.84□□□□□ -1.15
LINC00906-204ENST00000589466 TRIM34Q9BYJ4 488 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 SEC31BQ9NQW1 1179 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 RNF181Q9P0P0 153 aa7.84□□□□□ -1.15
LINC00906-204ENST00000589466 ARFGEF1Q9Y6D6 1849 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 BCAR3O75815 825 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 GDF11O95390 407 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 CTSWP56202 376 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 SF3B3Q15393 1217 aaKnown RBP7.83□□□□□ -1.16
LINC00906-204ENST00000589466 CCDC93Q567U6 631 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 EPHA10Q5JZY3 1008 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 TMEM151AQ8N4L1 468 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 CRAMP1Q96RY5 1269 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 PPP1R12CQ9BZL4 782 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 ZNF277Q9NRM2 450 aaPredicted RBP7.83□□□□□ -1.16
LINC00906-204ENST00000589466 NOB1Q9ULX3 412 aaKnown RBP7.83□□□□□ -1.16
LINC00906-204ENST00000589466 LAMB2P55268 1798 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 CACNA1SQ13698 1873 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 COL4A5P29400 1685 aa7.83□□□□□ -1.16
LINC00906-204ENST00000589466 CDHR2Q9BYE9 1310 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 H7C1W4 665 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 PDE8AO60658 829 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 LMNB1P20700 586 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 ALDH1B1P30837 517 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 SOX11P35716 441 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 GRAPQ13588 217 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 ALDH1L2Q3SY69 923 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 PPP1R26Q5T8A7 1209 aaPredicted RBP7.82□□□□□ -1.16
LINC00906-204ENST00000589466 ZNF385CQ66K41 422 aaPredicted RBP7.82□□□□□ -1.16
LINC00906-204ENST00000589466 Q6ZVU0 165 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 DDX46Q7L014 1031 aaKnown RBP7.82□□□□□ -1.16
LINC00906-204ENST00000589466 CCDC155Q8N6L0 562 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 ARMC2Q8NEN0 867 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 HELBQ8NG08 1087 aaPredicted RBP7.82□□□□□ -1.16
LINC00906-204ENST00000589466 GRAPLQ8TC17 118 aaPredicted RBP7.82□□□□□ -1.16
LINC00906-204ENST00000589466 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
LINC00906-204ENST00000589466 YTHDC1Q96MU7 727 aaKnown RBP7.82□□□□□ -1.16
LINC00906-204ENST00000589466 GREM2Q9H772 168 aa7.82□□□□□ -1.16
LINC00906-204ENST00000589466 PTPRCP08575 1304 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
LINC00906-204ENST00000589466 GRM8O00222 908 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 CT47B1P0C2W7 299 aaPredicted RBP7.81□□□□□ -1.16
LINC00906-204ENST00000589466 NBPF7P0C2Y1 421 aaPredicted RBP7.81□□□□□ -1.16
LINC00906-204ENST00000589466 FKBP4Q02790 459 aaKnown RBP eCLIP7.81□□□□□ -1.16
LINC00906-204ENST00000589466 CTDSPL2Q05D32 466 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 TTLL11Q8NHH1 800 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 KAZALD1Q96I82 304 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 SUCLG2Q96I99 432 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 GPR101Q96P66 508 aaPredicted RBP7.81□□□□□ -1.16
LINC00906-204ENST00000589466 SRCIN1Q9C0H9 1055 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 ALG2Q9H553 416 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 HMX1Q9NP08 348 aaPredicted RBP7.81□□□□□ -1.16
LINC00906-204ENST00000589466 ATP6V0A2Q9Y487 856 aa7.81□□□□□ -1.16
LINC00906-204ENST00000589466 LTBP3Q9NS15 1303 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 DUOX1Q9NRD9 1551 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 SLC35F4A4IF30 521 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 WTIPA6NIX2 430 aaPredicted RBP7.8□□□□□ -1.16
LINC00906-204ENST00000589466 SPINT1O43278 529 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 ALDH1L1O75891 902 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 TRIM27P14373 513 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 FOXO4P98177 505 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 CCDC152Q4G0S7 254 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 SOGA3Q5TF21 947 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 FRAT1Q92837 279 aaPredicted RBP7.8□□□□□ -1.16
LINC00906-204ENST00000589466 AGBL1Q96MI9 1066 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 NMRK2Q9NPI5 230 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 C9orf78Q9NZ63 289 aaPredicted RBP7.8□□□□□ -1.16
LINC00906-204ENST00000589466 MTMR7Q9Y216 660 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 CHMP3Q9Y3E7 222 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 TAF1P21675 1872 aa7.8□□□□□ -1.16
LINC00906-204ENST00000589466 ZNF541Q9H0D2 1346 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 BBOX1O75936 387 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 ITGA6P23229 1130 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 IARSP41252 1262 aaKnown RBP7.79□□□□□ -1.16
LINC00906-204ENST00000589466 CTSOP43234 321 aaPredicted RBP7.79□□□□□ -1.16
LINC00906-204ENST00000589466 RPS8P62241 208 aaKnown RBP7.79□□□□□ -1.16
LINC00906-204ENST00000589466 GPSM2P81274 684 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 AOC3Q16853 763 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 LMBR1LQ6UX01 489 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 SP8Q8IXZ3 490 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 RTKN2Q8IZC4 609 aa7.79□□□□□ -1.16
LINC00906-204ENST00000589466 VWA5B2Q8N398 1253 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms