RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 DYMQ7RTS9 669 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 WDR18Q9BV38 432 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 PHLDB1Q86UU1 1377 aa4.87□□□□□ -1.63
ZNF540-207ENST00000589285 ARHGAP35Q9NRY4 1499 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 TLR3O15455 904 aaKnown RBP4.86□□□□□ -1.63
ZNF540-207ENST00000589285 APBA3O96018 575 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 GSTT1P30711 240 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 MRPL58Q14197 206 aaKnown RBP4.86□□□□□ -1.63
ZNF540-207ENST00000589285 SUZ12Q15022 739 aaKnown RBP4.86□□□□□ -1.63
ZNF540-207ENST00000589285 TTBK2Q6IQ55 1244 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 DAGLAQ9Y4D2 1042 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 CORINQ9Y5Q5 1042 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 PRAMEF27A3QJZ7 478 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 GRIN3BO60391 1043 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 CRKP46108 304 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 TNNI2P48788 182 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 NUTM2GQ5VZR2 741 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 TXNRD3Q86VQ6 643 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 KLHL23Q8NBE8 558 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 FBF1Q8TES7 1133 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 XAGE3Q8WTP9 111 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 KCNF1Q9H3M0 494 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 NFICP08651 508 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 GSTP1P09211 210 aaKnown RBP4.86□□□□□ -1.63
ZNF540-207ENST00000589285 BMP3P12645 472 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 ACTL7BQ9Y614 415 aa4.86□□□□□ -1.63
ZNF540-207ENST00000589285 MAGI3Q5TCQ9 1506 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 TFE3P19532 575 aaPredicted RBP4.85□□□□□ -1.63
ZNF540-207ENST00000589285 PLB1Q6P1J6 1458 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 CTTNBP2Q8WZ74 1663 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 NEFLP07196 543 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 CDK5R2Q13319 367 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 TTLL4Q14679 1199 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 UTP4Q969X6 686 aaKnown RBP4.85□□□□□ -1.63
ZNF540-207ENST00000589285 GAL3ST3Q96A11 431 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 RAD18Q9NS91 495 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 GGT7Q9UJ14 662 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 TRAK1Q9UPV9 953 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 U3KQE9 123 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 CFAP74Q9C0B2 1584 aa4.85□□□□□ -1.63
ZNF540-207ENST00000589285 ARAP3Q8WWN8 1544 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 FAM86C2PA6NEL3 165 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 NKG7Q16617 165 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 FDX2Q6P4F2 183 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 TRIM42Q8IWZ5 723 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 MRPL18Q9H0U6 180 aaKnown RBP4.84□□□□□ -1.63
ZNF540-207ENST00000589285 UBP1Q9NZI7 540 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 REREQ9P2R6 1566 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 KIF21BO75037 1637 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 AOC2O75106 756 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 RXRBP28702 533 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 RACK1P63244 317 aaKnown RBP4.84□□□□□ -1.63
ZNF540-207ENST00000589285 PLPPR2Q96GM1 343 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 CRELD1Q96HD1 420 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 TMPRSS13Q9BYE2 586 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 PCDHA4Q9UN74 947 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 MTUS2Q5JR59 1369 aa4.84□□□□□ -1.63
ZNF540-207ENST00000589285 PTPRGP23470 1445 aa4.84□□□□□ -1.64
ZNF540-207ENST00000589285 CARMIL2Q6F5E8 1435 aa4.84□□□□□ -1.64
ZNF540-207ENST00000589285 MSTNO14793 375 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 ADH5P11766 374 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 SPDYE3A6NKU9 549 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 GBP2P32456 591 aaPredicted RBP4.83□□□□□ -1.64
ZNF540-207ENST00000589285 ADMP35318 185 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 ZNF252P-AS1Q0IIN9 211 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 TAF1CQ15572 869 aaPredicted RBP4.83□□□□□ -1.64
ZNF540-207ENST00000589285 ZNF326Q5BKZ1 582 aaKnown RBP4.83□□□□□ -1.64
ZNF540-207ENST00000589285 FBXL19Q6PCT2 694 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 C2CD4AQ8NCU7 369 aaPredicted RBP4.83□□□□□ -1.64
ZNF540-207ENST00000589285 SEMA6BQ9H3T3 888 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 ABCC2Q92887 1545 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 ZNF644Q9H582 1327 aaPredicted RBP4.83□□□□□ -1.64
ZNF540-207ENST00000589285 PF4P02776 101 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 NEFMP07197 916 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 DZIP1LQ8IYY4 767 aaKnown RBP4.83□□□□□ -1.64
ZNF540-207ENST00000589285 MFSD14AQ96MC6 490 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 SSBP4Q9BWG4 385 aaPredicted RBP4.83□□□□□ -1.64
ZNF540-207ENST00000589285 SEMA6CQ9H3T2 930 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 DISC1Q9NRI5 854 aa4.83□□□□□ -1.64
ZNF540-207ENST00000589285 CDK13Q14004 1512 aaKnown RBP4.82□□□□□ -1.64
ZNF540-207ENST00000589285 RBM47A0AV96 593 aaKnown RBP4.82□□□□□ -1.64
ZNF540-207ENST00000589285 F13A1P00488 732 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 CYP11A1P05108 521 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 NTF4P34130 210 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 ARL4DP49703 201 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 LIG3P49916 1009 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 LRFN4Q6PJG9 635 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 DTWD1Q8N5C7 304 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 GOLM1Q8NBJ4 401 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 RNF208Q9H0X6 261 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 FBRSQ9HAH7 460 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 PCDHGC5Q9Y5F6 944 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 VPS8Q8N3P4 1428 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 TEX14Q8IWB6 1497 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 ABCA8O94911 1581 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 IQGAP2Q13576 1575 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 FANCCQ00597 558 aa4.82□□□□□ -1.64
ZNF540-207ENST00000589285 WIPI1Q5MNZ9 446 aaPredicted RBP4.82□□□□□ -1.64
ZNF540-207ENST00000589285 PLEKHD1A6NEE1 506 aa4.81□□□□□ -1.64
ZNF540-207ENST00000589285 TMPRSS2O15393 492 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms