RNA–Protein interactions for RNA: ENST00000588957.5

GFAP-215, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-215ENST00000588957 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
GFAP-215ENST00000588957 TCP10L2B9ZVM9 353 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 POLR3DP05423 398 aaPredicted RBP17.12■□□□□ 0.33
GFAP-215ENST00000588957 HSPD1P10809 573 aaKnown RBP17.12■□□□□ 0.33
GFAP-215ENST00000588957 RASA3Q14644 834 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 CHADLQ6NUI6 762 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 FOXP4Q8IVH2 680 aaPredicted RBP17.12■□□□□ 0.33
GFAP-215ENST00000588957 IFNL3Q8IZI9 196 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 OSBPL5Q9H0X9 879 aaPredicted RBP17.12■□□□□ 0.33
GFAP-215ENST00000588957 MCM9Q9NXL9 1143 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 PCDHAC2Q9Y5I4 1007 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
GFAP-215ENST00000588957 ZMYM6O95789 1325 aa17.12■□□□□ 0.33
GFAP-215ENST00000588957 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 TOMM70O94826 608 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 PICALMQ13492 652 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 SLFNL1Q499Z3 407 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 RNF20Q5VTR2 975 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
GFAP-215ENST00000588957 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
GFAP-215ENST00000588957 FLT1P17948 1338 aa17.11■□□□□ 0.33
GFAP-215ENST00000588957 MYH7P12883 1935 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 AK9Q5TCS8 1911 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 CHGBP05060 677 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 PCP11498 1178 aaKnown RBP17.1■□□□□ 0.33
GFAP-215ENST00000588957 MCCP23508 829 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 TCP10Q12799 353 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 DCAF15Q66K64 600 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 ZNF589Q86UQ0 364 aaPredicted RBP17.1■□□□□ 0.33
GFAP-215ENST00000588957 MAPKAPK5Q8IW41 473 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 ZNF784Q8NCA9 323 aaPredicted RBP17.1■□□□□ 0.33
GFAP-215ENST00000588957 SDR42E1Q8WUS8 393 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 FAM198AQ9UFP1 575 aa17.1■□□□□ 0.33
GFAP-215ENST00000588957 HERC5Q9UII4 1024 aaKnown RBP17.1■□□□□ 0.33
GFAP-215ENST00000588957 FGAP02671 866 aa17.09■□□□□ 0.33
GFAP-215ENST00000588957 NFIAQ12857 509 aa17.09■□□□□ 0.33
GFAP-215ENST00000588957 IMMTQ16891 758 aaKnown RBP17.09■□□□□ 0.33
GFAP-215ENST00000588957 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
GFAP-215ENST00000588957 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
GFAP-215ENST00000588957 MAP4K1Q92918 833 aa17.09■□□□□ 0.33
GFAP-215ENST00000588957 MKRN1Q9UHC7 482 aaKnown RBP17.09■□□□□ 0.33
GFAP-215ENST00000588957 COL2A1P02458 1487 aaPredicted RBP17.09■□□□□ 0.33
GFAP-215ENST00000588957 ATRNL1Q5VV63 1379 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 USP17L12C9JPN9 530 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 USP17L21D6R901 530 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 ZNF213O14771 459 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 PRKAB2O43741 272 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
GFAP-215ENST00000588957 TBC1D12O60347 775 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 CACNB3P54284 484 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 FSTL1Q12841 308 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 CRACR2BQ8N4Y2 399 aaPredicted RBP17.08■□□□□ 0.32
GFAP-215ENST00000588957 CSRNP1Q96S65 589 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 EHD4Q9H223 541 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 RNF41Q9H4P4 317 aaPredicted RBP17.08■□□□□ 0.32
GFAP-215ENST00000588957 SWAP70Q9UH65 585 aa17.08■□□□□ 0.32
GFAP-215ENST00000588957 KIF3CO14782 793 aa17.07■□□□□ 0.32
GFAP-215ENST00000588957 ZKSCAN1P17029 563 aaPredicted RBP17.07■□□□□ 0.32
GFAP-215ENST00000588957 PDE4BQ07343 736 aa17.07■□□□□ 0.32
GFAP-215ENST00000588957 C12orf60Q5U649 245 aa17.07■□□□□ 0.32
GFAP-215ENST00000588957 USP48Q86UV5 1035 aa17.07■□□□□ 0.32
GFAP-215ENST00000588957 DDX4Q9NQI0 724 aaKnown RBP17.07■□□□□ 0.32
GFAP-215ENST00000588957 SERPINB13Q9UIV8 391 aa17.07■□□□□ 0.32
GFAP-215ENST00000588957 MYO5AQ9Y4I1 1855 aaKnown RBP17.07■□□□□ 0.32
GFAP-215ENST00000588957 MAP1SQ66K74 1059 aaPredicted RBP17.06■□□□□ 0.32
GFAP-215ENST00000588957 CTR9Q6PD62 1173 aa17.06■□□□□ 0.32
GFAP-215ENST00000588957 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
GFAP-215ENST00000588957 ANAPC4Q9UJX5 808 aa17.06■□□□□ 0.32
GFAP-215ENST00000588957 PALD1Q9ULE6 856 aa17.06■□□□□ 0.32
GFAP-215ENST00000588957 ASTN2O75129 1339 aaPredicted RBP17.05■□□□□ 0.32
GFAP-215ENST00000588957 UNCXA6NJT0 531 aa17.05■□□□□ 0.32
GFAP-215ENST00000588957 MINDY4BA8MYZ0 360 aa17.05■□□□□ 0.32
GFAP-215ENST00000588957 FKBP1BP68106 108 aa17.05■□□□□ 0.32
GFAP-215ENST00000588957 VPS53Q5VIR6 699 aa17.05■□□□□ 0.32
GFAP-215ENST00000588957 TMEM39BQ9GZU3 492 aa17.05■□□□□ 0.32
GFAP-215ENST00000588957 GINM1Q9NU53 330 aa17.05■□□□□ 0.32
GFAP-215ENST00000588957 CNTNAP1P78357 1384 aa17.04■□□□□ 0.32
GFAP-215ENST00000588957 MAP3K10Q02779 954 aa17.04■□□□□ 0.32
GFAP-215ENST00000588957 PPARAQ07869 468 aa17.04■□□□□ 0.32
GFAP-215ENST00000588957 TRDNQ13061 729 aa17.04■□□□□ 0.32
GFAP-215ENST00000588957 KRT32Q14532 448 aa17.04■□□□□ 0.32
GFAP-215ENST00000588957 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
GFAP-215ENST00000588957 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
GFAP-215ENST00000588957 CCDC17Q96LX7 622 aa17.04■□□□□ 0.32
GFAP-215ENST00000588957 SAP30BPQ9UHR5 308 aaKnown RBP17.04■□□□□ 0.32
GFAP-215ENST00000588957 RBM8AQ9Y5S9 174 aaKnown RBP17.04■□□□□ 0.32
GFAP-215ENST00000588957 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
GFAP-215ENST00000588957 IREB2P48200 963 aaKnown RBP17.03■□□□□ 0.32
GFAP-215ENST00000588957 PPP4R3BQ5MIZ7 849 aa17.03■□□□□ 0.32
GFAP-215ENST00000588957 ARMC9Q7Z3E5 817 aa17.03■□□□□ 0.32
GFAP-215ENST00000588957 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
GFAP-215ENST00000588957 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
GFAP-215ENST00000588957 ZNF341Q9BYN7 854 aa17.03■□□□□ 0.32
GFAP-215ENST00000588957 GLIS2Q9BZE0 524 aaPredicted RBP17.03■□□□□ 0.32
GFAP-215ENST00000588957 CNNM2Q9H8M5 875 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms