RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 SLC45A1Q9Y2W3 748 aa13.88□□□□□ -0.19
CALR-206ENST00000588454 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
CALR-206ENST00000588454 ZHX2Q9Y6X8 837 aa13.88□□□□□ -0.19
CALR-206ENST00000588454 ATRNL1Q5VV63 1379 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 EYA2O00167 538 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 SOX1O00570 391 aaPredicted RBP13.87□□□□□ -0.19
CALR-206ENST00000588454 TFRCP02786 760 aaKnown RBP13.87□□□□□ -0.19
CALR-206ENST00000588454 INHAP05111 366 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 SLC5A1P13866 664 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 ELNP15502 786 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 PTPRAP18433 802 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 PRDX5P30044 214 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 RFX5P48382 616 aaPredicted RBP13.87□□□□□ -0.19
CALR-206ENST00000588454 MAP3K10Q02779 954 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 SCYL3Q8IZE3 742 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 CRISPLD2Q9H0B8 497 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 USP44Q9H0E7 712 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 PAK6Q9NQU5 681 aaPredicted RBP13.87□□□□□ -0.19
CALR-206ENST00000588454 DNAH12Q6ZR08 3092 aa13.87□□□□□ -0.19
CALR-206ENST00000588454 ENTPD3O75355 529 aa13.86□□□□□ -0.19
CALR-206ENST00000588454 LDHBP07195 334 aaKnown RBP13.86□□□□□ -0.19
CALR-206ENST00000588454 DEFB118Q96PH6 123 aa13.86□□□□□ -0.19
CALR-206ENST00000588454 IDI2Q9BXS1 227 aa13.86□□□□□ -0.19
CALR-206ENST00000588454 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
CALR-206ENST00000588454 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
CALR-206ENST00000588454 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
CALR-206ENST00000588454 SALL1Q9NSC2 1324 aa13.86□□□□□ -0.19
CALR-206ENST00000588454 TNPO2O14787 897 aaKnown RBP13.85□□□□□ -0.19
CALR-206ENST00000588454 RGS3P49796 1198 aa13.85□□□□□ -0.19
CALR-206ENST00000588454 GADL1Q6ZQY3 521 aa13.85□□□□□ -0.19
CALR-206ENST00000588454 ATG9AQ7Z3C6 839 aa13.85□□□□□ -0.19
CALR-206ENST00000588454 MRPL50Q8N5N7 158 aaKnown RBP13.85□□□□□ -0.19
CALR-206ENST00000588454 LRCH3Q96II8 777 aa13.85□□□□□ -0.19
CALR-206ENST00000588454 PAWRQ96IZ0 340 aaKnown RBP13.85□□□□□ -0.19
CALR-206ENST00000588454 PTPRFP10586 1907 aa13.85□□□□□ -0.19
CALR-206ENST00000588454 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
CALR-206ENST00000588454 ZBTB22O15209 634 aa13.84□□□□□ -0.19
CALR-206ENST00000588454 BMP8BP34820 402 aa13.84□□□□□ -0.19
CALR-206ENST00000588454 SH3BP5LQ7L8J4 393 aa13.84□□□□□ -0.19
CALR-206ENST00000588454 GDF15Q99988 308 aa13.84□□□□□ -0.19
CALR-206ENST00000588454 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
CALR-206ENST00000588454 LRRFIP2Q9Y608 721 aaKnown RBP13.84□□□□□ -0.19
CALR-206ENST00000588454 PTPRCP08575 1304 aa13.84□□□□□ -0.19
CALR-206ENST00000588454 MYH2Q9UKX2 1941 aa13.84□□□□□ -0.19
CALR-206ENST00000588454 PHIPQ8WWQ0 1821 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 CTNND1O60716 968 aaKnown RBP13.83□□□□□ -0.2
CALR-206ENST00000588454 GPR153Q6NV75 609 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 NECAB2Q7Z6G3 386 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 SMCR8Q8TEV9 937 aaPredicted RBP13.83□□□□□ -0.2
CALR-206ENST00000588454 COA7Q96BR5 231 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 DENND2AQ9ULE3 1009 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 GAKO14976 1311 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 DOCK2Q92608 1830 aa13.83□□□□□ -0.2
CALR-206ENST00000588454 DDTLA6NHG4 134 aaPredicted RBP13.82□□□□□ -0.2
CALR-206ENST00000588454 SEMA3EO15041 775 aa13.82□□□□□ -0.2
CALR-206ENST00000588454 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
CALR-206ENST00000588454 ANKLE1Q8NAG6 615 aa13.82□□□□□ -0.2
CALR-206ENST00000588454 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
CALR-206ENST00000588454 CEP126Q9P2H0 1117 aa13.82□□□□□ -0.2
CALR-206ENST00000588454 AGTPBP1Q9UPW5 1226 aa13.82□□□□□ -0.2
CALR-206ENST00000588454 RFX7Q2KHR2 1363 aa13.82□□□□□ -0.2
CALR-206ENST00000588454 TRIM75PA6NK02 468 aa13.81□□□□□ -0.2
CALR-206ENST00000588454 CIAO1O76071 339 aa13.81□□□□□ -0.2
CALR-206ENST00000588454 SLURP2P0DP57 97 aa13.81□□□□□ -0.2
CALR-206ENST00000588454 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
CALR-206ENST00000588454 FAM110CQ1W6H9 321 aa13.81□□□□□ -0.2
CALR-206ENST00000588454 ZSCAN29Q8IWY8 852 aaPredicted RBP13.81□□□□□ -0.2
CALR-206ENST00000588454 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
CALR-206ENST00000588454 DIS3LQ8TF46 1054 aaKnown RBP13.81□□□□□ -0.2
CALR-206ENST00000588454 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.81□□□□□ -0.24e-7■■□□□ 12.6
CALR-206ENST00000588454 CCER2I3L3R5 266 aa13.8□□□□□ -0.2
CALR-206ENST00000588454 TBC1D12O60347 775 aa13.8□□□□□ -0.2
CALR-206ENST00000588454 PHKA1P46020 1223 aa13.8□□□□□ -0.2
CALR-206ENST00000588454 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
CALR-206ENST00000588454 ZGPATQ8N5A5 531 aaKnown RBP13.8□□□□□ -0.2
CALR-206ENST00000588454 DDX4Q9NQI0 724 aaKnown RBP13.8□□□□□ -0.2
CALR-206ENST00000588454 GJD2Q9UKL4 321 aa13.8□□□□□ -0.2
CALR-206ENST00000588454 TAOK2Q9UL54 1235 aa13.8□□□□□ -0.2
CALR-206ENST00000588454 DOCK1Q14185 1865 aa13.8□□□□□ -0.2
CALR-206ENST00000588454 HMGCRP04035 888 aa13.79□□□□□ -0.2
CALR-206ENST00000588454 GCLCP48506 637 aaPredicted RBP13.79□□□□□ -0.2
CALR-206ENST00000588454 SLF2Q8IX21 1173 aa13.79□□□□□ -0.2
CALR-206ENST00000588454 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
CALR-206ENST00000588454 SIL1Q9H173 461 aa13.79□□□□□ -0.2
CALR-206ENST00000588454 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.79□□□□□ -0.2
CALR-206ENST00000588454 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
CALR-206ENST00000588454 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
CALR-206ENST00000588454 VCANP13611 3396 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 NPM3O75607 178 aaKnown RBP13.78□□□□□ -0.2
CALR-206ENST00000588454 LRIT3Q3SXY7 679 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 CCDC102BQ68D86 513 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 CCDC84Q86UT8 332 aaPredicted RBP13.78□□□□□ -0.2
CALR-206ENST00000588454 C7orf61Q8IZ16 206 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 SSH1Q8WYL5 1049 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 NBPF3Q9H094 633 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 PDS5AQ29RF7 1337 aaKnown RBP13.78□□□□□ -0.2
CALR-206ENST00000588454 ZNF521Q96K83 1311 aa13.78□□□□□ -0.2
CALR-206ENST00000588454 GPR75-ASB3A0A0A6YYF3 556 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms