RNA–Protein interactions for RNA: ENST00000587708.6

PSENEN-202, Transcript of presenilin enhancer, gamma-secretase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSENEN, Length 1,661 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSENEN-202ENST00000587708 CHD4Q14839 1912 aa20.53■□□□□ 0.88
PSENEN-202ENST00000587708 USP17L12C9JPN9 530 aa20.53■□□□□ 0.88
PSENEN-202ENST00000587708 USP17L21D6R901 530 aa20.53■□□□□ 0.88
PSENEN-202ENST00000587708 IFIT3O14879 490 aaKnown RBP20.53■□□□□ 0.88
PSENEN-202ENST00000587708 ORC4O43929 436 aa20.53■□□□□ 0.88
PSENEN-202ENST00000587708 NAP1L2Q9ULW6 460 aaPredicted RBP20.53■□□□□ 0.88
PSENEN-202ENST00000587708 GOLGA8BA8MQT2 603 aa20.52■□□□□ 0.88
PSENEN-202ENST00000587708 PDE4BQ07343 736 aa20.52■□□□□ 0.88
PSENEN-202ENST00000587708 SLC51AQ86UW1 340 aa20.52■□□□□ 0.88
PSENEN-202ENST00000587708 ZSCAN16Q9H4T2 348 aaPredicted RBP20.52■□□□□ 0.88
PSENEN-202ENST00000587708 LY9Q9HBG7 655 aa20.52■□□□□ 0.88
PSENEN-202ENST00000587708 GAKO14976 1311 aa20.52■□□□□ 0.87
PSENEN-202ENST00000587708 PTPDC1A2A3K4 754 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 CPLX1O14810 134 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 RIMBP2O15034 1052 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 USP5P45974 858 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 GTF2IP78347 998 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 CCT2P78371 535 aaKnown RBP20.51■□□□□ 0.87
PSENEN-202ENST00000587708 APOA5Q6Q788 366 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 MRIQ9BWK5 157 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 TOMM22Q9NS69 142 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 MKRN1Q9UHC7 482 aaKnown RBP20.51■□□□□ 0.87
PSENEN-202ENST00000587708 HPS5Q9UPZ3 1129 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 JAG2Q9Y219 1238 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 C10orf71Q711Q0 1435 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 VPS37CA5D8V6 355 aaPredicted RBP20.51■□□□□ 0.87
PSENEN-202ENST00000587708 CTDNEP1O95476 244 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 FOXD4L5Q5VV16 416 aaPredicted RBP20.51■□□□□ 0.87
PSENEN-202ENST00000587708 NFXL1Q6ZNB6 911 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 IQCA1Q86XH1 822 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 FOXD4L4Q8WXT5 416 aaPredicted RBP20.51■□□□□ 0.87
PSENEN-202ENST00000587708 UBAC1Q9BSL1 405 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 SLC12A7Q9Y666 1083 aa20.51■□□□□ 0.87
PSENEN-202ENST00000587708 DDX49Q9Y6V7 483 aaKnown RBP20.51■□□□□ 0.87
PSENEN-202ENST00000587708 NID2Q14112 1375 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 H3BQV1 296 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 ZBTB43O43298 467 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 JAK2O60674 1132 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
PSENEN-202ENST00000587708 MBD3O95983 291 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 NCLP19338 710 aaKnown RBP20.5■□□□□ 0.87
PSENEN-202ENST00000587708 METAP2P50579 478 aaKnown RBP eCLIP20.5■□□□□ 0.87
PSENEN-202ENST00000587708 WTAPQ15007 396 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 IFFO2Q5TF58 517 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 ZNF287Q9HBT7 754 aa20.5■□□□□ 0.87
PSENEN-202ENST00000587708 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
PSENEN-202ENST00000587708 CCDC196A0A1B0GTZ2 297 aa20.49■□□□□ 0.87
PSENEN-202ENST00000587708 CCDC178Q5BJE1 867 aa20.49■□□□□ 0.87
PSENEN-202ENST00000587708 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
PSENEN-202ENST00000587708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
PSENEN-202ENST00000587708 TACC3Q9Y6A5 838 aa20.49■□□□□ 0.87
PSENEN-202ENST00000587708 C12orf60Q5U649 245 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 MCM9Q9NXL9 1143 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 CHRNA5P30532 468 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 BTDP43251 543 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 DIXDC1Q155Q3 683 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 GRIK5Q16478 980 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 TTLL6Q8N841 843 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 SH3RF3Q8TEJ3 882 aaPredicted RBP20.48■□□□□ 0.87
PSENEN-202ENST00000587708 VPS33BQ9H267 617 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 NCOA5Q9HCD5 579 aaKnown RBP20.48■□□□□ 0.87
PSENEN-202ENST00000587708 INCENPQ9NQS7 918 aa20.48■□□□□ 0.87
PSENEN-202ENST00000587708 ISY1Q9ULR0 285 aaKnown RBP20.48■□□□□ 0.87
PSENEN-202ENST00000587708 ROBO3Q96MS0 1386 aa20.47■□□□□ 0.87
PSENEN-202ENST00000587708 MYH2Q9UKX2 1941 aa20.47■□□□□ 0.87
PSENEN-202ENST00000587708 STRIP1Q5VSL9 837 aa20.47■□□□□ 0.87
PSENEN-202ENST00000587708 ATL3Q6DD88 541 aa20.47■□□□□ 0.87
PSENEN-202ENST00000587708 HHIPL2Q6UWX4 724 aa20.47■□□□□ 0.87
PSENEN-202ENST00000587708 RTKN2Q8IZC4 609 aa20.47■□□□□ 0.87
PSENEN-202ENST00000587708 DDX11Q96FC9 970 aa20.47■□□□□ 0.87
PSENEN-202ENST00000587708 ZSCAN10Q96SZ4 725 aaPredicted RBP20.47■□□□□ 0.87
PSENEN-202ENST00000587708 HDLBPQ00341 1268 aaKnown RBP20.46■□□□□ 0.87
PSENEN-202ENST00000587708 CALM1P0DP23 149 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 CALM2P0DP24 149 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 CALM3P0DP25 149 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 KRT85P78386 507 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 SEC23AQ15436 765 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 SOGA3Q5TF21 947 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 CDC37L1Q7L3B6 337 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 SLX4Q8IY92 1834 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 LAMB1P07942 1786 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 GOLGA8AA7E2F4 631 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 RANBP6O60518 1105 aaKnown RBP20.45■□□□□ 0.86
PSENEN-202ENST00000587708 TGFB2P61812 414 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 KIAA2012Q0VF49 1180 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 DOK7Q18PE1 504 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 TEX11Q8IYF3 940 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 TGFBRAP1Q8WUH2 860 aa20.45■□□□□ 0.86
PSENEN-202ENST00000587708 SCAND2PQ9GZW5 306 aaPredicted RBP20.45■□□□□ 0.86
PSENEN-202ENST00000587708 ORC3Q9UBD5 711 aaPredicted RBP20.45■□□□□ 0.86
PSENEN-202ENST00000587708 BAZ2AQ9UIF9 1905 aaKnown RBP20.44■□□□□ 0.86
PSENEN-202ENST00000587708 FDPSP14324 419 aaKnown RBP20.44■□□□□ 0.86
PSENEN-202ENST00000587708 RHBDL3P58872 404 aa20.44■□□□□ 0.86
PSENEN-202ENST00000587708 NKX2-3Q8TAU0 364 aa20.44■□□□□ 0.86
PSENEN-202ENST00000587708 WASF1Q92558 559 aa20.44■□□□□ 0.86
PSENEN-202ENST00000587708 STK36Q9NRP7 1315 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms