RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 ZNF213O14771 459 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 FGAP02671 866 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 HMGB1P09429 215 aaKnown RBP12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 DYNLL1P63167 89 aaKnown RBP12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 NECTIN1Q15223 517 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 CCDC129Q6ZRS4 1044 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 APOBEC3FQ8IUX4 373 aaKnown RBP12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 KCNB2Q92953 911 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 TBC1D32Q96NH3 1257 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 IL25Q9H293 177 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 CNNM2Q9H8M5 875 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 DCP1AQ9NPI6 582 aaPredicted RBP12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 PPP2R3BQ9Y5P8 575 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 MYH1P12882 1939 aa12.31□□□□□ -0.44
CLPTM1-207ENST00000587537 ATRNL1Q5VV63 1379 aa12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 WDHD1O75717 1129 aaPredicted RBP12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 DDNO94850 711 aaPredicted RBP12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 CHGBP05060 677 aa12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 HLA-DOAP06340 250 aa12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 PSMA5P28066 241 aa12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 PTH1RQ03431 593 aa12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 PRMT6Q96LA8 375 aaPredicted RBP12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 FLT1P17948 1338 aa12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
CLPTM1-207ENST00000587537 SEC24BO95487 1268 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 PDE4BQ07343 736 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 TRDNQ13061 729 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 SLFNL1Q499Z3 407 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 VPS53Q5VIR6 699 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 CREB3L3Q68CJ9 461 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 FAM151AQ8WW52 585 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 TM6SF1Q9BZW5 370 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 OSBPL5Q9H0X9 879 aaPredicted RBP12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 EHD4Q9H223 541 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 MCM9Q9NXL9 1143 aa12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 ZNF70Q9UC06 446 aaPredicted RBP12.29□□□□□ -0.44
CLPTM1-207ENST00000587537 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 SLC27A2O14975 620 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 FOXP2O15409 715 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 POLR3DP05423 398 aaPredicted RBP12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 C12orf60Q5U649 245 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 MTA3Q9BTC8 594 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 KRT23Q9C075 422 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 TDRD3Q9H7E2 651 aaKnown RBP12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 EPB41L4AQ9HCS5 686 aaPredicted RBP12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 SWAP70Q9UH65 585 aa12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 BAZ2AQ9UIF9 1905 aaKnown RBP12.28□□□□□ -0.44
CLPTM1-207ENST00000587537 USP17L12C9JPN9 530 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 USP17L21D6R901 530 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 PRKAB2O43741 272 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 CYP21A2P08686 494 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 VEGFAP15692 232 aaPredicted RBP12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 EPHX2P34913 555 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 PPARAQ07869 468 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 RABEP1Q15276 862 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 CTR9Q6PD62 1173 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 FOXP4Q8IVH2 680 aaPredicted RBP12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 STAG1Q8WVM7 1258 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 PI4KBQ9UBF8 816 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 PGAP2Q9UHJ9 254 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 HERC5Q9UII4 1024 aaKnown RBP12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 WDR19Q8NEZ3 1342 aa12.27□□□□□ -0.45
CLPTM1-207ENST00000587537 FGRP09769 529 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 EPS15P42566 896 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 TBC1D10BQ4KMP7 808 aaPredicted RBP12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 CCDC178Q5BJE1 867 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 AKNAD1Q5T1N1 836 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 MFSD6Q6ZSS7 791 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 SAMD7Q7Z3H4 446 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 RALYLQ86SE5 291 aaKnown RBP12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 METTL16Q86W50 562 aaKnown RBP12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 MAPKAPK5Q8IW41 473 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 NCOA7Q8NI08 942 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 DCPSQ96C86 337 aaKnown RBP12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 TAF1DQ9H5J8 278 aaPredicted RBP12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 VEZTQ9HBM0 779 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 FAM198AQ9UFP1 575 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 SERPINB13Q9UIV8 391 aa12.26□□□□□ -0.45
CLPTM1-207ENST00000587537 ORC4O43929 436 aa12.25□□□□□ -0.45
CLPTM1-207ENST00000587537 TBC1D12O60347 775 aa12.25□□□□□ -0.45
CLPTM1-207ENST00000587537 CACNB1Q02641 598 aaPredicted RBP12.25□□□□□ -0.45
CLPTM1-207ENST00000587537 PICALMQ13492 652 aa12.25□□□□□ -0.45
CLPTM1-207ENST00000587537 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
CLPTM1-207ENST00000587537 GINM1Q9NU53 330 aa12.25□□□□□ -0.45
CLPTM1-207ENST00000587537 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
CLPTM1-207ENST00000587537 CLRN2A0PK11 232 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 MINDY4BA8MYZ0 360 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 E7EWF7 191 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 ST18O60284 1047 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 MYH8P13535 1937 aa12.24□□□□□ -0.45
CLPTM1-207ENST00000587537 MCM2P49736 904 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms