RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
SMARCA4-212ENST00000586985 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
SMARCA4-212ENST00000586985 CSRNP1Q96S65 589 aa17.58■□□□□ 0.4
SMARCA4-212ENST00000586985 DDX4Q9NQI0 724 aaKnown RBP17.58■□□□□ 0.4
SMARCA4-212ENST00000586985 WBP1LQ9NX94 342 aa17.58■□□□□ 0.4
SMARCA4-212ENST00000586985 CSADQ9Y600 493 aa17.58■□□□□ 0.4
SMARCA4-212ENST00000586985 PAPPA2Q9BXP8 1791 aa17.58■□□□□ 0.4
SMARCA4-212ENST00000586985 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 ZNF532Q9HCE3 1301 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 MAGEB6P1A0A0J9YX57 407 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 GLRX3O76003 335 aaKnown RBP17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 MX1P20591 662 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 TSHZ3Q63HK5 1081 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 OTUD7AQ8TE49 926 aaPredicted RBP17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 TGFBRAP1Q8WUH2 860 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 CLMNQ96JQ2 1002 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 ZIC5Q96T25 663 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 SSC5DA1L4H1 1573 aa17.57■□□□□ 0.4
SMARCA4-212ENST00000586985 DDTLA6NHG4 134 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-212ENST00000586985 USP5P45974 858 aa17.56■□□□□ 0.4
SMARCA4-212ENST00000586985 MKRN3Q13064 507 aaKnown RBP17.56■□□□□ 0.4
SMARCA4-212ENST00000586985 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-212ENST00000586985 WRNIP1Q96S55 665 aa17.56■□□□□ 0.4
SMARCA4-212ENST00000586985 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
SMARCA4-212ENST00000586985 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
SMARCA4-212ENST00000586985 SPRYD7Q5W111 196 aa17.55■□□□□ 0.4
SMARCA4-212ENST00000586985 SH3BP5LQ7L8J4 393 aa17.55■□□□□ 0.4
SMARCA4-212ENST00000586985 MAPKAPK5Q8IW41 473 aa17.55■□□□□ 0.4
SMARCA4-212ENST00000586985 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.55■□□□□ 0.42e-6■■□□□ 12.8
SMARCA4-212ENST00000586985 LNPKQ9C0E8 428 aa17.55■□□□□ 0.4
SMARCA4-212ENST00000586985 DHX36Q9H2U1 1008 aaKnown RBP17.55■□□□□ 0.4
SMARCA4-212ENST00000586985 ECM29Q5VYK3 1845 aa17.54■□□□□ 0.4
SMARCA4-212ENST00000586985 ADD2P35612 726 aa17.54■□□□□ 0.4
SMARCA4-212ENST00000586985 UBE3CQ15386 1083 aa17.54■□□□□ 0.4
SMARCA4-212ENST00000586985 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
SMARCA4-212ENST00000586985 CHD1LQ86WJ1 897 aa17.54■□□□□ 0.4
SMARCA4-212ENST00000586985 KBTBD3Q8NAB2 608 aa17.54■□□□□ 0.4
SMARCA4-212ENST00000586985 WNK4Q96J92 1243 aa17.54■□□□□ 0.4
SMARCA4-212ENST00000586985 TCRBV5S4A2TA0A5A2 114 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 ZBTB48P10074 688 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 INHBEP58166 350 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 NUCB1Q02818 461 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 VGLL4Q14135 290 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 PI4K2BQ8TCG2 481 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 ZKSCAN4Q969J2 545 aaPredicted RBP17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 RIOK1Q9BRS2 568 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 CRNKL1Q9BZJ0 848 aaKnown RBP17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 PI4KBQ9UBF8 816 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 STAP2Q9UGK3 403 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 ZNF112Q9UJU3 913 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 RFX7Q2KHR2 1363 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 AKAP11Q9UKA4 1901 aa17.53■□□□□ 0.4
SMARCA4-212ENST00000586985 CA12O43570 354 aa17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 TBC1D12O60347 775 aa17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 CTCFP49711 727 aaPredicted RBP17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 PDE1AP54750 535 aa17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 MAP3K10Q02779 954 aa17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 FOXP4Q8IVH2 680 aaPredicted RBP17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 OPTNQ96CV9 577 aa17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 MYH2Q9UKX2 1941 aa17.52■□□□□ 0.4
SMARCA4-212ENST00000586985 ATRNL1Q5VV63 1379 aa17.52■□□□□ 0.39
SMARCA4-212ENST00000586985 FLT1P17948 1338 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 MANSC4A6NHS7 340 aaPredicted RBP17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 FOXN1O15353 648 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 HLA-DOAP06340 250 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 INPP5BP32019 993 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 TM4SF4P48230 202 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 ERO1BQ86YB8 467 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 SAP30BPQ9UHR5 308 aaKnown RBP17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
SMARCA4-212ENST00000586985 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 RNF113AO15541 343 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 SLFNL1Q499Z3 407 aa17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 TTC6Q86TZ1 520 aa17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 CRACR2BQ8N4Y2 399 aaPredicted RBP17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 ARMT1Q9H993 441 aa17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 HERC5Q9UII4 1024 aaKnown RBP17.5■□□□□ 0.39
SMARCA4-212ENST00000586985 SPDYE5A6NIY4 337 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 PHF20L1A8MW92 1017 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 MBD4O95243 580 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 POLR3DP05423 398 aaPredicted RBP17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 LCORLQ8N3X6 602 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 OTUD5Q96G74 571 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 FSD1Q9BTV5 496 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 PICK1Q9NRD5 415 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 RNF186Q9NXI6 227 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 SNCAIPQ9Y6H5 919 aa17.49■□□□□ 0.39
SMARCA4-212ENST00000586985 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 TRPA1O75762 1119 aa17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 SLURP2P0DP57 97 aa17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 GTF2A2P52657 109 aa17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 PPATQ06203 517 aa17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 NOL9Q5SY16 702 aaKnown RBP17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 OTUD7BQ6GQQ9 843 aa17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
SMARCA4-212ENST00000586985 APPBP2Q92624 585 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms