RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 PI16Q6UXB8 463 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 CDC37L1Q7L3B6 337 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 TEKT1Q969V4 418 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 LARP6Q9BRS8 491 aaKnown RBP21.88■■□□□ 1.09
RETREG3-205ENST00000586870 LRP2BPQ9P2M1 347 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 MYH7P12883 1935 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 LARGE1O95461 756 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 PRDX5P30044 214 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 CRKP46108 304 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 ANGEL2Q5VTE6 544 aaKnown RBP21.88■■□□□ 1.09
RETREG3-205ENST00000586870 MCTP1Q6DN14 999 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 DZIP1Q86YF9 867 aaKnown RBP21.88■■□□□ 1.09
RETREG3-205ENST00000586870 SULF1Q8IWU6 871 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 GGA3Q9NZ52 723 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 PGAP2Q9UHJ9 254 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 CTNNA3Q9UI47 895 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 TPCN1Q9ULQ1 816 aa21.88■■□□□ 1.09
RETREG3-205ENST00000586870 HDLBPQ00341 1268 aaKnown RBP21.87■■□□□ 1.09
RETREG3-205ENST00000586870 ME3Q16798 604 aa21.87■■□□□ 1.09
RETREG3-205ENST00000586870 KRT26Q7Z3Y9 468 aa21.86■■□□□ 1.09
RETREG3-205ENST00000586870 CCDC83Q8IWF9 413 aa21.86■■□□□ 1.09
RETREG3-205ENST00000586870 SLF2Q8IX21 1173 aa21.86■■□□□ 1.09
RETREG3-205ENST00000586870 MTMR14Q8NCE2 650 aa21.86■■□□□ 1.09
RETREG3-205ENST00000586870 RAI14Q9P0K7 980 aa21.86■■□□□ 1.09
RETREG3-205ENST00000586870 COL1A1P02452 1464 aaPredicted RBP21.86■■□□□ 1.09
RETREG3-205ENST00000586870 PDIA4P13667 645 aaKnown RBP21.85■■□□□ 1.09
RETREG3-205ENST00000586870 ADD2P35612 726 aa21.85■■□□□ 1.09
RETREG3-205ENST00000586870 TOB2Q14106 344 aaPredicted RBP21.85■■□□□ 1.09
RETREG3-205ENST00000586870 UBE3CQ15386 1083 aa21.85■■□□□ 1.09
RETREG3-205ENST00000586870 USP48Q86UV5 1035 aa21.85■■□□□ 1.09
RETREG3-205ENST00000586870 MRIQ9BWK5 157 aa21.85■■□□□ 1.09
RETREG3-205ENST00000586870 GLIS2Q9BZE0 524 aaPredicted RBP21.85■■□□□ 1.09
RETREG3-205ENST00000586870 SPDYE2BA6NHP3 402 aa21.84■■□□□ 1.09
RETREG3-205ENST00000586870 SPDYE6P0CI01 402 aa21.84■■□□□ 1.09
RETREG3-205ENST00000586870 PRMT6Q96LA8 375 aaPredicted RBP21.84■■□□□ 1.09
RETREG3-205ENST00000586870 PIH1D3Q9NQM4 214 aaKnown RBP21.84■■□□□ 1.09
RETREG3-205ENST00000586870 ASTN2O75129 1339 aaPredicted RBP21.84■■□□□ 1.09
RETREG3-205ENST00000586870 ITGBL1O95965 494 aaPredicted RBP21.84■■□□□ 1.09
RETREG3-205ENST00000586870 VEZTQ9HBM0 779 aa21.84■■□□□ 1.09
RETREG3-205ENST00000586870 LMBRD1Q9NUN5 540 aa21.84■■□□□ 1.09
RETREG3-205ENST00000586870 PCDHAC2Q9Y5I4 1007 aa21.84■■□□□ 1.09
RETREG3-205ENST00000586870 PSME4Q14997 1843 aa21.83■■□□□ 1.09
RETREG3-205ENST00000586870 GSTO1P78417 241 aa21.83■■□□□ 1.08
RETREG3-205ENST00000586870 KLHL40Q2TBA0 621 aa21.83■■□□□ 1.08
RETREG3-205ENST00000586870 HHIPL2Q6UWX4 724 aa21.83■■□□□ 1.08
RETREG3-205ENST00000586870 DHX32Q7L7V1 743 aaKnown RBP21.83■■□□□ 1.08
RETREG3-205ENST00000586870 CLRN2A0PK11 232 aa21.82■■□□□ 1.08
RETREG3-205ENST00000586870 ST3GAL1Q11201 340 aa21.82■■□□□ 1.08
RETREG3-205ENST00000586870 COL9A3Q14050 684 aaPredicted RBP21.82■■□□□ 1.08
RETREG3-205ENST00000586870 DIXDC1Q155Q3 683 aa21.82■■□□□ 1.08
RETREG3-205ENST00000586870 SLC9C2Q5TAH2 1124 aa21.82■■□□□ 1.08
RETREG3-205ENST00000586870 STOX1Q6ZVD7 989 aa21.82■■□□□ 1.08
RETREG3-205ENST00000586870 ZBED3Q96IU2 234 aaPredicted RBP21.82■■□□□ 1.08
RETREG3-205ENST00000586870 PUS7LQ9H0K6 701 aaKnown RBP21.82■■□□□ 1.08
RETREG3-205ENST00000586870 E7EWF7 191 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 TRAF5O00463 557 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 LDHCP07864 332 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 GJB2P29033 226 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 Q6ZUG5 572 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 APOBEC3FQ8IUX4 373 aaKnown RBP21.81■■□□□ 1.08
RETREG3-205ENST00000586870 TCEANC2Q96MN5 208 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 ZDHHC15Q96MV8 337 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 GZF1Q9H116 711 aaPredicted RBP21.81■■□□□ 1.08
RETREG3-205ENST00000586870 TDRD3Q9H7E2 651 aaKnown RBP21.81■■□□□ 1.08
RETREG3-205ENST00000586870 ZNF408Q9H9D4 720 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 TMOD2Q9NZR1 351 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 PITPNM2Q9BZ72 1349 aa21.81■■□□□ 1.08
RETREG3-205ENST00000586870 ADM5C9JUS6 153 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 GPAA1O43292 621 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 STX6O43752 255 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 ZSCAN22P10073 491 aaPredicted RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 HSPA6P17066 643 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 SYT1P21579 422 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 MECOMQ03112 1051 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 FOXD4L5Q5VV16 416 aaPredicted RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 NECAB1Q8N987 351 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 FOXD4L4Q8WXT5 416 aaPredicted RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 DDX49Q9Y6V7 483 aaKnown RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 IDH1O75874 414 aaKnown RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 PDE6AP16499 860 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 APLP1P51693 650 aa21.8■■□□□ 1.08
RETREG3-205ENST00000586870 EXOSC10Q01780 885 aaKnown RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 IMMTQ16891 758 aaKnown RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 L1TD1Q5T7N2 865 aaKnown RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 SCAF8Q9UPN6 1271 aaKnown RBP21.8■■□□□ 1.08
RETREG3-205ENST00000586870 LAMA4Q16363 1823 aa21.79■■□□□ 1.08
RETREG3-205ENST00000586870 FOXP2O15409 715 aa21.79■■□□□ 1.08
RETREG3-205ENST00000586870 MAP3K12Q12852 859 aa21.79■■□□□ 1.08
RETREG3-205ENST00000586870 NOL10Q9BSC4 688 aaKnown RBP21.79■■□□□ 1.08
RETREG3-205ENST00000586870 ZNF70Q9UC06 446 aaPredicted RBP21.79■■□□□ 1.08
RETREG3-205ENST00000586870 ISY1Q9ULR0 285 aaKnown RBP21.79■■□□□ 1.08
RETREG3-205ENST00000586870 DOCK2Q92608 1830 aa21.78■■□□□ 1.08
RETREG3-205ENST00000586870 PASKQ96RG2 1323 aa21.78■■□□□ 1.08
RETREG3-205ENST00000586870 ZNF532Q9HCE3 1301 aa21.78■■□□□ 1.08
RETREG3-205ENST00000586870 PRPF40AO75400 957 aaKnown RBP21.78■■□□□ 1.08
RETREG3-205ENST00000586870 NAA16Q6N069 864 aaPredicted RBP21.78■■□□□ 1.08
RETREG3-205ENST00000586870 AGXT2Q9BYV1 514 aa21.78■■□□□ 1.08
RETREG3-205ENST00000586870 DAGLAQ9Y4D2 1042 aa21.78■■□□□ 1.08
RETREG3-205ENST00000586870 TCRBV5S4A2TA0A5A2 114 aa21.77■■□□□ 1.08
RETREG3-205ENST00000586870 FGAP02671 866 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms