RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 ZNF252P-AS1Q0IIN9 211 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 PABPC4Q13310 644 aaKnown RBP eCLIP8.66□□□□□ -1.02
TPM4-203ENST00000586193 UBAP2LQ14157 1087 aaKnown RBP8.66□□□□□ -1.02
TPM4-203ENST00000586193 ZYXQ15942 572 aaKnown RBP8.66□□□□□ -1.02
TPM4-203ENST00000586193 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
TPM4-203ENST00000586193 PERM1Q5SV97 790 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 ADAMTSL4Q6UY14 1074 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 ZBTB38Q8NAP3 1195 aaPredicted RBP8.66□□□□□ -1.02
TPM4-203ENST00000586193 TMEM40Q8WWA1 233 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 SLC26A8Q96RN1 970 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 GEMIN8Q9NWZ8 242 aaKnown RBP8.66□□□□□ -1.02
TPM4-203ENST00000586193 PCDHB10Q9UN67 800 aa8.66□□□□□ -1.02
TPM4-203ENST00000586193 LTBP3Q9NS15 1303 aa8.65□□□□□ -1.02
TPM4-203ENST00000586193 SENP3-EIF4A1A0A087X0R7 540 aa8.65□□□□□ -1.02
TPM4-203ENST00000586193 MEIS3P2A8K0S8 358 aa8.65□□□□□ -1.02
TPM4-203ENST00000586193 SMNDC1O75940 238 aaKnown RBP eCLIP8.65□□□□□ -1.02
TPM4-203ENST00000586193 MAP1SQ66K74 1059 aaPredicted RBP8.65□□□□□ -1.02
TPM4-203ENST00000586193 UNC5AQ6ZN44 842 aa8.65□□□□□ -1.02
TPM4-203ENST00000586193 VN1R5Q7Z5H4 357 aa8.65□□□□□ -1.02
TPM4-203ENST00000586193 FAM9AQ8IZU1 332 aaPredicted RBP8.65□□□□□ -1.02
TPM4-203ENST00000586193 C8orf48Q96LL4 319 aa8.65□□□□□ -1.02
TPM4-203ENST00000586193 NUCKS1Q9H1E3 243 aaKnown RBP8.65□□□□□ -1.02
TPM4-203ENST00000586193 UNC13AQ9UPW8 1703 aa8.65□□□□□ -1.03
TPM4-203ENST00000586193 PDE8AO60658 829 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 HTR3BO95264 441 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 BMP1P13497 986 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 SOX5P35711 763 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 NCAPHQ15003 741 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 LONRF2Q1L5Z9 754 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 SLC10A6Q3KNW5 377 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
TPM4-203ENST00000586193 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
TPM4-203ENST00000586193 MCM8Q9UJA3 840 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 DNMT3LQ9UJW3 386 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 SOX13Q9UN79 622 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 CORINQ9Y5Q5 1042 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 SLC12A7Q9Y666 1083 aa8.64□□□□□ -1.03
TPM4-203ENST00000586193 TTBK1Q5TCY1 1321 aaPredicted RBP8.63□□□□□ -1.03
TPM4-203ENST00000586193 FAM86C2PA6NEL3 165 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 ALG1L2C9J202 215 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 SUSD5O60279 629 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 ALDH1L1O75891 902 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 ACRP10323 421 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 EIF2AK2P19525 551 aaKnown RBP8.63□□□□□ -1.03
TPM4-203ENST00000586193 L1CAMP32004 1257 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 TBC1D8BQ0IIM8 1120 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 FOXB2Q5VYV0 432 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 KIAA1211LQ6NV74 962 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 TRIM67Q6ZTA4 783 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 PDZD3Q86UT5 571 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 LRRC47Q8N1G4 583 aaKnown RBP8.63□□□□□ -1.03
TPM4-203ENST00000586193 ABHD17AQ96GS6 310 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
TPM4-203ENST00000586193 WASHC2CQ9Y4E1 1318 aa8.62□□□□□ -1.03
TPM4-203ENST00000586193 RAPGEF3O95398 923 aa8.62□□□□□ -1.03
TPM4-203ENST00000586193 ESRRAP11474 423 aaPredicted RBP8.62□□□□□ -1.03
TPM4-203ENST00000586193 SELPP16109 830 aa8.62□□□□□ -1.03
TPM4-203ENST00000586193 OVOS1Q6IE37 1185 aa8.62□□□□□ -1.03
TPM4-203ENST00000586193 RNF180Q86T96 592 aa8.62□□□□□ -1.03
TPM4-203ENST00000586193 TAB3Q8N5C8 712 aaPredicted RBP8.62□□□□□ -1.03
TPM4-203ENST00000586193 PRR36Q9H6K5 1346 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 MYO15BQ96JP2 1530 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 IQCA1LA6NCM1 817 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 GFRA2O00451 464 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 RFPL3O75679 317 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 PMLP29590 882 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 RHBDL3P58872 404 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 TTF1Q15361 905 aaPredicted RBP8.61□□□□□ -1.03
TPM4-203ENST00000586193 ZC3H12BQ5HYM0 836 aaKnown RBP8.61□□□□□ -1.03
TPM4-203ENST00000586193 SCARA3Q6AZY7 606 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 ATG4CQ96DT6 458 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
TPM4-203ENST00000586193 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
TPM4-203ENST00000586193 DNAJB12Q9NXW2 375 aaKnown RBP8.61□□□□□ -1.03
TPM4-203ENST00000586193 REV1Q9UBZ9 1251 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 PCDHA4Q9UN74 947 aa8.61□□□□□ -1.03
TPM4-203ENST00000586193 CCDC163A0A0D9SF12 145 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 SLC22A31A6NKX4 558 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 GSTP1P09211 210 aaKnown RBP8.6□□□□□ -1.03
TPM4-203ENST00000586193 NME1P15531 152 aaKnown RBP8.6□□□□□ -1.03
TPM4-203ENST00000586193 PTPRAP18433 802 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 PRR20EP86478 221 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 PRR20CP86479 221 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 PRR20DP86480 221 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 PRR20BP86481 221 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 PRR20AP86496 221 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 MLECQ14165 292 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 NFE2Q16621 373 aaPredicted RBP8.6□□□□□ -1.03
TPM4-203ENST00000586193 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.036e-7■■□□□ 14.3
TPM4-203ENST00000586193 AKAP4Q5JQC9 854 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 WIPI1Q5MNZ9 446 aaPredicted RBP8.6□□□□□ -1.03
TPM4-203ENST00000586193 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 TRIM46Q7Z4K8 759 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 SMC5Q8IY18 1101 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 ATL2Q8NHH9 583 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 KLHL6Q8WZ60 621 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 EXOC2Q96KP1 924 aa8.6□□□□□ -1.03
TPM4-203ENST00000586193 CLUHP3Q96NS8 147 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms