RNA–Protein interactions for RNA: ENST00000585543.6

GFAP-205, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-205ENST00000585543 RIOK1Q9BRS2 568 aaKnown RBP20.15■□□□□ 0.82
GFAP-205ENST00000585543 CREBZFQ9NS37 354 aa20.15■□□□□ 0.82
GFAP-205ENST00000585543 FAM198AQ9UFP1 575 aa20.15■□□□□ 0.82
GFAP-205ENST00000585543 MYH1P12882 1939 aa20.14■□□□□ 0.81
GFAP-205ENST00000585543 COL2A1P02458 1487 aaPredicted RBP20.14■□□□□ 0.81
GFAP-205ENST00000585543 FMR1Q06787 632 aaKnown RBP eCLIP20.14■□□□□ 0.81
GFAP-205ENST00000585543 MAPKAPK5Q8IW41 473 aa20.14■□□□□ 0.81
GFAP-205ENST00000585543 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
GFAP-205ENST00000585543 LCORLQ8N3X6 602 aa20.14■□□□□ 0.81
GFAP-205ENST00000585543 OSBPL5Q9H0X9 879 aaPredicted RBP20.14■□□□□ 0.81
GFAP-205ENST00000585543 DHX36Q9H2U1 1008 aaKnown RBP20.14■□□□□ 0.81
GFAP-205ENST00000585543 ARMT1Q9H993 441 aa20.14■□□□□ 0.81
GFAP-205ENST00000585543 FLT1P17948 1338 aa20.13■□□□□ 0.81
GFAP-205ENST00000585543 HLA-DOAP06340 250 aa20.13■□□□□ 0.81
GFAP-205ENST00000585543 GNAT2P19087 354 aa20.13■□□□□ 0.81
GFAP-205ENST00000585543 MFAP1P55081 439 aaKnown RBP20.13■□□□□ 0.81
GFAP-205ENST00000585543 ZMYM1Q5SVZ6 1142 aa20.13■□□□□ 0.81
GFAP-205ENST00000585543 NBPF12Q5TAG4 269 aaPredicted RBP20.13■□□□□ 0.81
GFAP-205ENST00000585543 CSRNP1Q96S65 589 aa20.13■□□□□ 0.81
GFAP-205ENST00000585543 TRIM34Q9BYJ4 488 aa20.13■□□□□ 0.81
GFAP-205ENST00000585543 IREB2P48200 963 aaKnown RBP20.12■□□□□ 0.81
GFAP-205ENST00000585543 DLK2Q6UY11 383 aa20.12■□□□□ 0.81
GFAP-205ENST00000585543 PUS7LQ9H0K6 701 aaKnown RBP20.12■□□□□ 0.81
GFAP-205ENST00000585543 DDX4Q9NQI0 724 aaKnown RBP20.12■□□□□ 0.81
GFAP-205ENST00000585543 HELLSQ9NRZ9 838 aa20.12■□□□□ 0.81
GFAP-205ENST00000585543 ATP8A2Q9NTI2 1148 aa20.12■□□□□ 0.81
GFAP-205ENST00000585543 SLC4A4Q9Y6R1 1079 aa20.12■□□□□ 0.81
GFAP-205ENST00000585543 GPAA1O43292 621 aa20.11■□□□□ 0.81
GFAP-205ENST00000585543 GSPT1P15170 499 aaKnown RBP20.11■□□□□ 0.81
GFAP-205ENST00000585543 SDSP20132 328 aa20.11■□□□□ 0.81
GFAP-205ENST00000585543 PRKG1Q13976 671 aa20.11■□□□□ 0.81
GFAP-205ENST00000585543 SLFNL1Q499Z3 407 aa20.11■□□□□ 0.81
GFAP-205ENST00000585543 CST9Q5W186 159 aa20.11■□□□□ 0.81
GFAP-205ENST00000585543 OSBP2Q969R2 916 aa20.11■□□□□ 0.81
GFAP-205ENST00000585543 TEPSINQ96N21 525 aa20.11■□□□□ 0.81
GFAP-205ENST00000585543 ANGEL1Q9UNK9 670 aaKnown RBP20.11■□□□□ 0.81
GFAP-205ENST00000585543 ATRNL1Q5VV63 1379 aa20.1■□□□□ 0.81
GFAP-205ENST00000585543 RUFY2Q8WXA3 655 aa20.1■□□□□ 0.81
GFAP-205ENST00000585543 NACAP1Q9BZK3 213 aa20.1■□□□□ 0.81
GFAP-205ENST00000585543 M0R2C6 588 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 CHGBP05060 677 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 APPP05067 770 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 POLR3DP05423 398 aaPredicted RBP20.09■□□□□ 0.81
GFAP-205ENST00000585543 HUNKP57058 714 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 MCMDC2Q4G0Z9 681 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 BMP2KLQ5H9B9 411 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 PAXIP1Q6ZW49 1069 aaPredicted RBP20.09■□□□□ 0.81
GFAP-205ENST00000585543 TTC6Q86TZ1 520 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 CRACR2BQ8N4Y2 399 aaPredicted RBP20.09■□□□□ 0.81
GFAP-205ENST00000585543 SDR42E1Q8WUS8 393 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 STRBPQ96SI9 672 aaKnown RBP20.09■□□□□ 0.81
GFAP-205ENST00000585543 ZNF341Q9BYN7 854 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 PI4KBQ9UBF8 816 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 SAP30BPQ9UHR5 308 aaKnown RBP20.09■□□□□ 0.81
GFAP-205ENST00000585543 TLL2Q9Y6L7 1015 aa20.09■□□□□ 0.81
GFAP-205ENST00000585543 NMIQ13287 307 aaPredicted RBP20.08■□□□□ 0.81
GFAP-205ENST00000585543 CASC1Q6TDU7 716 aa20.08■□□□□ 0.81
GFAP-205ENST00000585543 ZFPM1Q8IX07 1006 aa20.08■□□□□ 0.81
GFAP-205ENST00000585543 MCM9Q9NXL9 1143 aa20.08■□□□□ 0.81
GFAP-205ENST00000585543 SSC5DA1L4H1 1573 aa20.08■□□□□ 0.8
GFAP-205ENST00000585543 DDTLA6NHG4 134 aaPredicted RBP20.07■□□□□ 0.8
GFAP-205ENST00000585543 TDO2P48775 406 aa20.07■□□□□ 0.8
GFAP-205ENST00000585543 GIMAP6Q6P9H5 292 aa20.07■□□□□ 0.8
GFAP-205ENST00000585543 CDAN1Q8IWY9 1227 aa20.07■□□□□ 0.8
GFAP-205ENST00000585543 SEC62Q99442 399 aaKnown RBP20.07■□□□□ 0.8
GFAP-205ENST00000585543 DCP1AQ9NPI6 582 aaPredicted RBP20.07■□□□□ 0.8
GFAP-205ENST00000585543 HERC5Q9UII4 1024 aaKnown RBP20.07■□□□□ 0.8
GFAP-205ENST00000585543 CSADQ9Y600 493 aa20.07■□□□□ 0.8
GFAP-205ENST00000585543 BAZ2AQ9UIF9 1905 aaKnown RBP20.07■□□□□ 0.8
GFAP-205ENST00000585543 UNCXA6NJT0 531 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 DEFB115Q30KQ5 88 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 DDX60LQ5H9U9 1706 aaKnown RBP20.06■□□□□ 0.8
GFAP-205ENST00000585543 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
GFAP-205ENST00000585543 SAPCD2Q86UD0 394 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 SKAP1Q86WV1 359 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 ANKRD13AQ8IZ07 590 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 HHIPL1Q96JK4 782 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 FAM227BQ96M60 508 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.06■□□□□ 0.8
GFAP-205ENST00000585543 ARPP21Q9UBL0 812 aaPredicted RBP20.06■□□□□ 0.8
GFAP-205ENST00000585543 PALD1Q9ULE6 856 aa20.06■□□□□ 0.8
GFAP-205ENST00000585543 CCDC171Q6TFL3 1326 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 RAD50Q92878 1312 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 A0A0D9SFI3 127 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 UBE2Q2LH0YL09 131 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 PRKAB2O43741 272 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 ECE1P42892 770 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 MAP3K11Q16584 847 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 MIGA2Q7L4E1 593 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 SH3BP5LQ7L8J4 393 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 FOXP4Q8IVH2 680 aaPredicted RBP20.05■□□□□ 0.8
GFAP-205ENST00000585543 WRNIP1Q96S55 665 aa20.05■□□□□ 0.8
GFAP-205ENST00000585543 LAMB1P07942 1786 aa20.04■□□□□ 0.8
GFAP-205ENST00000585543 PATL2C9JE40 543 aaKnown RBP20.04■□□□□ 0.8
GFAP-205ENST00000585543 TBC1D12O60347 775 aa20.04■□□□□ 0.8
GFAP-205ENST00000585543 USP2O75604 605 aaPredicted RBP20.04■□□□□ 0.8
GFAP-205ENST00000585543 NAPBQ9H115 298 aa20.04■□□□□ 0.8
GFAP-205ENST00000585543 OTOFQ9HC10 1997 aa20.04■□□□□ 0.8
GFAP-205ENST00000585543 RASSF10A6NK89 507 aa20.03■□□□□ 0.8
GFAP-205ENST00000585543 ZNF157P51786 506 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms