RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 FDPSP14324 419 aaKnown RBP13□□□□□ -0.33
TOP3A-217ENST00000584582 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
TOP3A-217ENST00000584582 GOLGA8FQ08AF8 430 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 GOLGA8DPQ0D2H9 430 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 UBE3CQ15386 1083 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 CAMTA1Q9Y6Y1 1673 aa13□□□□□ -0.33
TOP3A-217ENST00000584582 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 VWA3AA6NCI4 1184 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 SSBP05455 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
TOP3A-217ENST00000584582 CSF1RP07333 972 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 CYP2D6P10635 497 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 GUCY1A2P33402 732 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 ZNF75DP51815 510 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 TRAPPC3LQ5T215 181 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 HEATR3Q7Z4Q2 680 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 KLRK1P26718 216 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 CDC25AP30304 524 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-217ENST00000584582 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 GPIHBP1Q8IV16 184 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 GOLGA8HP0CJ92 632 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 EIF5P55010 431 aaKnown RBP12.99□□□□□ -0.33
TOP3A-217ENST00000584582 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
TOP3A-217ENST00000584582 MB21D2Q8IYB1 491 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-217ENST00000584582 CNBD1Q8NA66 436 aa12.99□□□□□ -0.33
TOP3A-217ENST00000584582 TPM3P06753 285 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 TSPY3P0CV98 308 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 TSPY8P0CW00 308 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 UBASH3AP57075 661 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 PTPN14Q15678 1187 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 C3orf67Q6ZVT6 689 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 BRAPQ7Z569 592 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 TGFBRAP1Q8WUH2 860 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 TRIM34Q9BYJ4 488 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 UFL1O94874 794 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 ERCC3P19447 782 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 PDE4BQ07343 736 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
TOP3A-217ENST00000584582 CPVLQ9H3G5 476 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 KCNH3Q9ULD8 1083 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 LDHBP07195 334 aaKnown RBP12.98□□□□□ -0.33
TOP3A-217ENST00000584582 KIF23Q02241 960 aaPredicted RBP12.98□□□□□ -0.33
TOP3A-217ENST00000584582 PIK3AP1Q6ZUJ8 805 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 LINC00301Q8NCQ3 95 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 RCOR1Q9UKL0 485 aa12.98□□□□□ -0.33
TOP3A-217ENST00000584582 AP5Z1O43299 807 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 CASP1P29466 404 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 FANCBQ8NB91 859 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 DYNLL2Q96FJ2 89 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 ZHX3Q9H4I2 956 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-217ENST00000584582 ERVV-1B6SEH8 477 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 SH2B2O14492 632 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-217ENST00000584582 TRMT1LQ7Z2T5 733 aaKnown RBP12.97□□□□□ -0.33
TOP3A-217ENST00000584582 RASGRP4Q8TDF6 673 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 SMARCE1Q969G3 411 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 CPDO75976 1380 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
TOP3A-217ENST00000584582 TRIM75PA6NK02 468 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 GSG1L2A8MUP6 293 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 TOP1P11387 765 aaKnown RBP12.97□□□□□ -0.33
TOP3A-217ENST00000584582 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 HS1BP3Q53T59 392 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 MSL1Q68DK7 614 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 ADALQ6DHV7 355 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.33
TOP3A-217ENST00000584582 PDLIM2Q96JY6 352 aa12.97□□□□□ -0.33
TOP3A-217ENST00000584582 EPB41L4AQ9HCS5 686 aaPredicted RBP12.97□□□□□ -0.33
TOP3A-217ENST00000584582 CCDC194A0A1B0GVG4 234 aa12.96□□□□□ -0.33
TOP3A-217ENST00000584582 CBX1P83916 185 aa12.96□□□□□ -0.33
TOP3A-217ENST00000584582 TFAP4Q01664 338 aa12.96□□□□□ -0.33
TOP3A-217ENST00000584582 KIAA1468Q9P260 1216 aa12.96□□□□□ -0.33
TOP3A-217ENST00000584582 ZMYM6O95789 1325 aa12.96□□□□□ -0.33
TOP3A-217ENST00000584582 SMTNL1A8MU46 457 aa12.96□□□□□ -0.34
TOP3A-217ENST00000584582 GNAT2P19087 354 aa12.96□□□□□ -0.34
TOP3A-217ENST00000584582 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.34
TOP3A-217ENST00000584582 KRI1Q8N9T8 703 aaKnown RBP12.96□□□□□ -0.34
TOP3A-217ENST00000584582 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.34
TOP3A-217ENST00000584582 MINPP1Q9UNW1 487 aa12.96□□□□□ -0.34
TOP3A-217ENST00000584582 ZNF34Q8IZ26 560 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 SMARCC2Q8TAQ2 1214 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 OXER1Q8TDS5 423 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
TOP3A-217ENST00000584582 FBXO3Q9UK99 471 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 CAMTA2O94983 1202 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 SLC44A5Q8NCS7 719 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
TOP3A-217ENST00000584582 ELP1O95163 1332 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 XRN1Q8IZH2 1706 aaKnown RBP12.95□□□□□ -0.34
TOP3A-217ENST00000584582 FAM205CA6NFA0 338 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 PLEKHA8P1O95397 391 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 ATP1A3P13637 1013 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 LINC00116Q8NCU8 138 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 KCNB2Q92953 911 aa12.95□□□□□ -0.34
TOP3A-217ENST00000584582 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms