RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 ZSCAN29Q8IWY8 852 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-216ENST00000583804 ZFPM1Q8IX07 1006 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 IDI2Q9BXS1 227 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 DDX4Q9NQI0 724 aaKnown RBP13.1□□□□□ -0.31
TOP3A-216ENST00000583804 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
TOP3A-216ENST00000583804 RAD50Q92878 1312 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 GSG1L2A8MUP6 293 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 HSPD1P10809 573 aaKnown RBP13.09□□□□□ -0.31
TOP3A-216ENST00000583804 RASA3Q14644 834 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 MAP1SQ66K74 1059 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-216ENST00000583804 KRT26Q7Z3Y9 468 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 USP48Q86UV5 1035 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 NACAP1Q9BZK3 213 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 UPF2Q9HAU5 1272 aaKnown RBP13.09□□□□□ -0.31
TOP3A-216ENST00000583804 PGAP2Q9UHJ9 254 aa13.09□□□□□ -0.31
TOP3A-216ENST00000583804 SAP30BPQ9UHR5 308 aaKnown RBP13.09□□□□□ -0.31
TOP3A-216ENST00000583804 FLT1P17948 1338 aa13.08□□□□□ -0.31
TOP3A-216ENST00000583804 PITPNM2Q9BZ72 1349 aa13.08□□□□□ -0.31
TOP3A-216ENST00000583804 ADM5C9JUS6 153 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 KIF3CO14782 793 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 ENTPD3O75355 529 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 TDO2P48775 406 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 SLC4A8Q2Y0W8 1093 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 FAM83AQ86UY5 434 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 IFNL3Q8IZI9 196 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 TMEM39BQ9GZU3 492 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 OSBPL5Q9H0X9 879 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-216ENST00000583804 DCP1AQ9NPI6 582 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-216ENST00000583804 MCM9Q9NXL9 1143 aa13.08□□□□□ -0.32
TOP3A-216ENST00000583804 CNTNAP1P78357 1384 aa13.07□□□□□ -0.32
TOP3A-216ENST00000583804 POLR3DP05423 398 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-216ENST00000583804 PTH1RQ03431 593 aa13.07□□□□□ -0.32
TOP3A-216ENST00000583804 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
TOP3A-216ENST00000583804 CHADLQ6NUI6 762 aa13.07□□□□□ -0.32
TOP3A-216ENST00000583804 CDC37L1Q7L3B6 337 aa13.07□□□□□ -0.32
TOP3A-216ENST00000583804 GLIS2Q9BZE0 524 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-216ENST00000583804 NAPBQ9H115 298 aa13.07□□□□□ -0.32
TOP3A-216ENST00000583804 PALD1Q9ULE6 856 aa13.07□□□□□ -0.32
TOP3A-216ENST00000583804 MINDY4BA8MYZ0 360 aa13.06□□□□□ -0.32
TOP3A-216ENST00000583804 USP17L12C9JPN9 530 aa13.06□□□□□ -0.32
TOP3A-216ENST00000583804 USP17L21D6R901 530 aa13.06□□□□□ -0.32
TOP3A-216ENST00000583804 GIMAP6Q6P9H5 292 aa13.06□□□□□ -0.32
TOP3A-216ENST00000583804 DLK2Q6UY11 383 aa13.06□□□□□ -0.32
TOP3A-216ENST00000583804 AMOTL1Q8IY63 956 aa13.06□□□□□ -0.32
TOP3A-216ENST00000583804 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
TOP3A-216ENST00000583804 RPAP1Q9BWH6 1393 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-216ENST00000583804 FOXP2O15409 715 aa13.05□□□□□ -0.32
TOP3A-216ENST00000583804 REC8O95072 547 aa13.05□□□□□ -0.32
TOP3A-216ENST00000583804 FGAP02671 866 aa13.05□□□□□ -0.32
TOP3A-216ENST00000583804 CYP2D6P10635 497 aa13.05□□□□□ -0.32
TOP3A-216ENST00000583804 DSCC1Q9BVC3 393 aa13.05□□□□□ -0.32
TOP3A-216ENST00000583804 LSG1Q9H089 658 aaKnown RBP13.05□□□□□ -0.32
TOP3A-216ENST00000583804 EPB41L4AQ9HCS5 686 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-216ENST00000583804 MKRN1Q9UHC7 482 aaKnown RBP13.05□□□□□ -0.32
TOP3A-216ENST00000583804 PPP2R3BQ9Y5P8 575 aa13.05□□□□□ -0.32
TOP3A-216ENST00000583804 CYP2D7A0A087X1C5 515 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 DDTLA6NHG4 134 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-216ENST00000583804 HLA-DOAP06340 250 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 C1QTNF8P60827 252 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 ALX1Q15699 326 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 NBPF12Q5TAG4 269 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-216ENST00000583804 CTR9Q6PD62 1173 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 SH3BP5LQ7L8J4 393 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 CDAN1Q8IWY9 1227 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
TOP3A-216ENST00000583804 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 ECM29Q5VYK3 1845 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 TRAF5O00463 557 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 EIF5BO60841 1220 aaKnown RBP13.04□□□□□ -0.32
TOP3A-216ENST00000583804 TOMM70O94826 608 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 PLCD1P51178 756 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 SUPT20HL1Q3ZLR7 823 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 STK11IPQ8N1F8 1099 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 CRACR2BQ8N4Y2 399 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-216ENST00000583804 CDCA5Q96FF9 252 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 TEPSINQ96N21 525 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 PI4KBQ9UBF8 816 aa13.04□□□□□ -0.32
TOP3A-216ENST00000583804 ARPP21Q9UBL0 812 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-216ENST00000583804 U3KPZ7 1027 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-216ENST00000583804 HAND2P61296 217 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 EVX2Q03828 476 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 FMR1Q06787 632 aaKnown RBP eCLIP13.03□□□□□ -0.32
TOP3A-216ENST00000583804 SBK1Q52WX2 424 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 C12orf60Q5U649 245 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 MIGA2Q7L4E1 593 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 SMC1BQ8NDV3 1235 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 MAP4K1Q92918 833 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 TBC1D32Q96NH3 1257 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 ZNF408Q9H9D4 720 aa13.03□□□□□ -0.32
TOP3A-216ENST00000583804 RBM8AQ9Y5S9 174 aaKnown RBP13.03□□□□□ -0.32
TOP3A-216ENST00000583804 POLR2AP24928 1970 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 1108.1 ms